FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1503, 257 aa 1>>>pF1KE1503 257 - 257 aa - 257 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3087+/-0.000782; mu= 14.5994+/- 0.047 mean_var=65.2316+/-12.896, 0's: 0 Z-trim(107.5): 8 B-trim: 0 in 0/50 Lambda= 0.158798 statistics sampled from 9615 (9621) to 9615 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.296), width: 16 Scan time: 1.960 The best scores are: opt bits E(32554) CCDS6433.1 RPL8 gene_id:6132|Hs108|chr8 ( 257) 1731 405.1 2.5e-113 >>CCDS6433.1 RPL8 gene_id:6132|Hs108|chr8 (257 aa) initn: 1731 init1: 1731 opt: 1731 Z-score: 2148.2 bits: 405.1 E(32554): 2.5e-113 Smith-Waterman score: 1731; 99.6% identity (100.0% similar) in 257 aa overlap (1-257:1-257) 10 20 30 40 50 60 pF1KE1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: CCDS64 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 190 200 210 220 230 240 250 pF1KE1 RRTGRLRGTKTVQEKEN ::::::::::::::::: CCDS64 RRTGRLRGTKTVQEKEN 250 257 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:36:31 2016 done: Mon Nov 7 01:36:31 2016 Total Scan time: 1.960 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]