FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5204, 208 aa 1>>>pF1KE5204 208 - 208 aa - 208 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.4594+/-0.000832; mu= -2.3876+/- 0.051 mean_var=283.0583+/-55.749, 0's: 0 Z-trim(117.4): 9 B-trim: 0 in 0/54 Lambda= 0.076232 statistics sampled from 18087 (18095) to 18087 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.838), E-opt: 0.2 (0.556), width: 16 Scan time: 2.320 The best scores are: opt bits E(32554) CCDS42176.1 NOL3 gene_id:8996|Hs108|chr16 ( 208) 1460 172.4 1.8e-43 CCDS61960.1 NOL3 gene_id:8996|Hs108|chr16 ( 270) 1460 172.5 2.2e-43 CCDS58473.1 NOL3 gene_id:8996|Hs108|chr16 ( 219) 651 83.4 1.2e-16 >>CCDS42176.1 NOL3 gene_id:8996|Hs108|chr16 (208 aa) initn: 1460 init1: 1460 opt: 1460 Z-score: 893.8 bits: 172.4 E(32554): 1.8e-43 Smith-Waterman score: 1460; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208) 10 20 30 40 50 60 pF1KE5 MGNAQERPSETIDRERKRLVETLQADSGLLLDALLARGVLTGPEYEALDALPDAERRVRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MGNAQERPSETIDRERKRLVETLQADSGLLLDALLARGVLTGPEYEALDALPDAERRVRR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LLLLVQGKGEAACQELLRCAQRTAGAPDPAWDWQHVGPGYRDRSYDPPCPGHWTPEAPGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LLLLVQGKGEAACQELLRCAQRTAGAPDPAWDWQHVGPGYRDRSYDPPCPGHWTPEAPGS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 GTTCPGLPRASDPDEAGGPEGSEAVQSGTPEEPEPELEAEASKEAEPEPEPEPELEPEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 GTTCPGLPRASDPDEAGGPEGSEAVQSGTPEEPEPELEAEASKEAEPEPEPEPELEPEAE 130 140 150 160 170 180 190 200 pF1KE5 AEPEPELEPEPDPEPEPDFEERDESEDS :::::::::::::::::::::::::::: CCDS42 AEPEPELEPEPDPEPEPDFEERDESEDS 190 200 >>CCDS61960.1 NOL3 gene_id:8996|Hs108|chr16 (270 aa) initn: 1460 init1: 1460 opt: 1460 Z-score: 892.3 bits: 172.5 E(32554): 2.2e-43 Smith-Waterman score: 1460; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:63-270) 10 20 30 pF1KE5 MGNAQERPSETIDRERKRLVETLQADSGLL :::::::::::::::::::::::::::::: CCDS61 WRGRRTPSSPCWPPGPVLAEPSGGWDRAPTMGNAQERPSETIDRERKRLVETLQADSGLL 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE5 LDALLARGVLTGPEYEALDALPDAERRVRRLLLLVQGKGEAACQELLRCAQRTAGAPDPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 LDALLARGVLTGPEYEALDALPDAERRVRRLLLLVQGKGEAACQELLRCAQRTAGAPDPA 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE5 WDWQHVGPGYRDRSYDPPCPGHWTPEAPGSGTTCPGLPRASDPDEAGGPEGSEAVQSGTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 WDWQHVGPGYRDRSYDPPCPGHWTPEAPGSGTTCPGLPRASDPDEAGGPEGSEAVQSGTP 160 170 180 190 200 210 160 170 180 190 200 pF1KE5 EEPEPELEAEASKEAEPEPEPEPELEPEAEAEPEPELEPEPDPEPEPDFEERDESEDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 EEPEPELEAEASKEAEPEPEPEPELEPEAEAEPEPELEPEPDPEPEPDFEERDESEDS 220 230 240 250 260 270 >>CCDS58473.1 NOL3 gene_id:8996|Hs108|chr16 (219 aa) initn: 661 init1: 635 opt: 651 Z-score: 412.6 bits: 83.4 E(32554): 1.2e-16 Smith-Waterman score: 651; 73.6% identity (77.8% similar) in 144 aa overlap (1-139:1-139) 10 20 30 40 50 60 pF1KE5 MGNAQERPSETIDRERKRLVETLQADSGLLLDALLARGVLTGPEYEALDALPDAERRVRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MGNAQERPSETIDRERKRLVETLQADSGLLLDALLARGVLTGPEYEALDALPDAERRVRR 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 LLLLVQGKGEAACQELLRCAQRTAGAPDPAWDWQHVGPGYRDRSYDPPCPGHWT-----P :::::::::::::::::::::::::::::::::::. : . :. : CCDS58 LLLLVQGKGEAACQELLRCAQRTAGAPDPAWDWQHA-TGTAAMTLHAQATGRRRHPARGP 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 EAPGSGTTCPGLPRASDPDEAGGPEGSEAVQSGTPEEPEPELEAEASKEAEPEPEPEPEL .::: :: : . : .: CCDS58 HAPG----CPELQTLTRPGALRAPRRCNPGPRRSQSQSWKLRPLKRLNRSRSQSQSWNPR 120 130 140 150 160 170 208 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:29:36 2016 done: Mon Nov 7 22:29:36 2016 Total Scan time: 2.320 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]