FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6114, 167 aa 1>>>pF1KE6114 167 - 167 aa - 167 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7880+/-0.00027; mu= 15.8800+/- 0.017 mean_var=64.9658+/-13.508, 0's: 0 Z-trim(119.7): 31 B-trim: 3260 in 2/55 Lambda= 0.159123 statistics sampled from 34075 (34107) to 34075 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.4), width: 16 Scan time: 5.750 The best scores are: opt bits E(85289) NP_003664 (OMIM: 601954,604488,607487) telethonin ( 167) 1132 267.5 7e-72 >>NP_003664 (OMIM: 601954,604488,607487) telethonin [Hom (167 aa) initn: 1132 init1: 1132 opt: 1132 Z-score: 1411.5 bits: 267.5 E(85289): 7e-72 Smith-Waterman score: 1132; 100.0% identity (100.0% similar) in 167 aa overlap (1-167:1-167) 10 20 30 40 50 60 pF1KE6 MATSELSCEVSEENCERREAFWAEWKDLTLSTRPEEGCSLHEEDTQRHETYHQQGQCQVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MATSELSCEVSEENCERREAFWAEWKDLTLSTRPEEGCSLHEEDTQRHETYHQQGQCQVL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 VQRSPWLMMRMGILGRGLQEYQLPYQRVLPLPIFTPAKMGATKEEREDTPIQLQELLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 VQRSPWLMMRMGILGRGLQEYQLPYQRVLPLPIFTPAKMGATKEEREDTPIQLQELLALE 70 80 90 100 110 120 130 140 150 160 pF1KE6 TALGGQCVDRQEVAEITKQLPPVVPVSKPGALRRSLSRSMSQEAQRG ::::::::::::::::::::::::::::::::::::::::::::::: NP_003 TALGGQCVDRQEVAEITKQLPPVVPVSKPGALRRSLSRSMSQEAQRG 130 140 150 160 167 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:34:12 2016 done: Tue Nov 8 09:34:13 2016 Total Scan time: 5.750 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]