FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3917, 278 aa 1>>>pF1KE3917 278 - 278 aa - 278 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0921+/-0.000327; mu= 16.2347+/- 0.020 mean_var=69.2058+/-14.179, 0's: 0 Z-trim(117.2): 75 B-trim: 1051 in 2/54 Lambda= 0.154171 statistics sampled from 28892 (28995) to 28892 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.719), E-opt: 0.2 (0.34), width: 16 Scan time: 6.410 The best scores are: opt bits E(85289) NP_079183 (OMIM: 609094) F-box only protein 17 iso ( 278) 1960 444.6 9.6e-125 NP_680474 (OMIM: 609094) F-box only protein 17 iso ( 287) 1960 444.6 9.9e-125 NP_849142 (OMIM: 609099) F-box only protein 27 [Ho ( 283) 1157 266.0 5.7e-71 XP_016881779 (OMIM: 609099) PREDICTED: F-box only ( 249) 957 221.5 1.3e-57 NP_036300 (OMIM: 607112) F-box only protein 2 [Hom ( 296) 501 120.1 4.9e-27 XP_006710634 (OMIM: 605647) PREDICTED: F-box only ( 293) 492 118.1 2e-26 XP_016856496 (OMIM: 605647) PREDICTED: F-box only ( 293) 492 118.1 2e-26 XP_005263506 (OMIM: 605647) PREDICTED: F-box only ( 293) 492 118.1 2e-26 XP_005263505 (OMIM: 605647) PREDICTED: F-box only ( 293) 492 118.1 2e-26 NP_060908 (OMIM: 605647) F-box only protein 6 [Hom ( 293) 492 118.1 2e-26 XP_011539534 (OMIM: 605647) PREDICTED: F-box only ( 293) 492 118.1 2e-26 XP_005263508 (OMIM: 605647) PREDICTED: F-box only ( 293) 492 118.1 2e-26 NP_001291720 (OMIM: 609111) F-box only protein 44 ( 255) 450 108.7 1.1e-23 XP_016858332 (OMIM: 609111) PREDICTED: F-box only ( 255) 450 108.7 1.1e-23 XP_006711108 (OMIM: 609111) PREDICTED: F-box only ( 255) 450 108.7 1.1e-23 NP_149438 (OMIM: 609111) F-box only protein 44 iso ( 255) 450 108.7 1.1e-23 NP_001014765 (OMIM: 609111) F-box only protein 44 ( 255) 450 108.7 1.1e-23 NP_001001414 (OMIM: 615901) F-box only protein 50 ( 275) 254 65.1 1.6e-10 XP_005263593 (OMIM: 609111) PREDICTED: F-box only ( 256) 172 46.9 4.7e-05 XP_006711106 (OMIM: 609111) PREDICTED: F-box only ( 256) 172 46.9 4.7e-05 XP_011540737 (OMIM: 609111) PREDICTED: F-box only ( 256) 172 46.9 4.7e-05 XP_005263594 (OMIM: 609111) PREDICTED: F-box only ( 256) 172 46.9 4.7e-05 NP_001317284 (OMIM: 609111) F-box only protein 44 ( 256) 172 46.9 4.7e-05 XP_016858331 (OMIM: 609111) PREDICTED: F-box only ( 256) 172 46.9 4.7e-05 NP_904319 (OMIM: 609111) F-box only protein 44 iso ( 224) 164 45.1 0.00015 NP_904320 (OMIM: 609111) F-box only protein 44 iso ( 224) 164 45.1 0.00015 NP_001291719 (OMIM: 609111) F-box only protein 44 ( 224) 164 45.1 0.00015 XP_016858333 (OMIM: 609111) PREDICTED: F-box only ( 224) 164 45.1 0.00015 >>NP_079183 (OMIM: 609094) F-box only protein 17 isoform (278 aa) initn: 1960 init1: 1960 opt: 1960 Z-score: 2360.5 bits: 444.6 E(85289): 9.6e-125 Smith-Waterman score: 1960; 100.0% identity (100.0% similar) in 278 aa overlap (1-278:1-278) 10 20 30 40 50 60 pF1KE3 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG 190 200 210 220 230 240 250 260 270 pF1KE3 KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS :::::::::::::::::::::::::::::::::::::: NP_079 KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 250 260 270 >>NP_680474 (OMIM: 609094) F-box only protein 17 isoform (287 aa) initn: 1960 init1: 1960 opt: 1960 Z-score: 2360.3 bits: 444.6 E(85289): 9.9e-125 Smith-Waterman score: 1960; 100.0% identity (100.0% similar) in 278 aa overlap (1-278:10-287) 10 20 30 40 50 pF1KE3 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRD ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_680 MKQGLWLLEMGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 IVDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_680 IVDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIF 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE3 NSCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_680 NSCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQ 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE3 ELLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_680 ELLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQ 190 200 210 220 230 240 240 250 260 270 pF1KE3 VSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS ::::::::::::::::::::::::::::::::::::::::::::::: NP_680 VSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 250 260 270 280 >>NP_849142 (OMIM: 609099) F-box only protein 27 [Homo s (283 aa) initn: 899 init1: 856 opt: 1157 Z-score: 1395.1 bits: 266.0 E(85289): 5.7e-71 Smith-Waterman score: 1157; 57.7% identity (79.0% similar) in 286 aa overlap (1-278:1-283) 10 20 30 40 50 pF1KE3 MGARLSR---RRLPA---DPSLALD--ALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDI ::: .:: :.:: .: ::: ::::::. ::::::::.:. ::: :::.:: . NP_849 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 VDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFN ::: ..::: ::::..: :::: .:. : .. .. : : :.:.: : :.::::: : NP_849 VDGQALWLLILARDHGATGRALLHLARSC--QSPARNARP-CPLGRFCARRPIGRNLIRN 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 SCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQE ::..:.: : :.:::.::..:.: : :::::::::::::: :: :.:..:: ::.: : NP_849 PCGQEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPE 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 LLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQV ::::..:::::.::::::.. ::.:.: :.:::. . . :::: :::. ::.. .: .: NP_849 LLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHV 180 190 200 210 220 230 240 250 260 270 pF1KE3 SHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS .:::.:. :.:.::::. :.:.. :.::::: ::.::: ::.::: NP_849 THVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS 240 250 260 270 280 >>XP_016881779 (OMIM: 609099) PREDICTED: F-box only prot (249 aa) initn: 911 init1: 602 opt: 957 Z-score: 1155.5 bits: 221.5 E(85289): 1.3e-57 Smith-Waterman score: 957; 57.4% identity (77.6% similar) in 237 aa overlap (1-229:1-234) 10 20 30 40 50 pF1KE3 MGARLSR---RRLPA---DPSLALD--ALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDI ::: .:: :.:: .: ::: ::::::. ::::::::.:. ::: :::.:: . XP_016 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 VDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFN ::: ..::: ::::..: :::: .:. : .. .. : : :.:.: : :.::::: : XP_016 VDGQALWLLILARDHGATGRALLHLARSC--QSPARNARP-CPLGRFCARRPIGRNLIRN 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 SCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQE ::..:.: : :.:::.::..:.: : :::::::::::::: :: :.:..:: ::.: : XP_016 PCGQEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPE 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 LLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQV ::::..:::::.::::::.. ::.:.: :.:::. . . :::: :::. ::.. .: XP_016 LLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHN 180 190 200 210 220 230 240 250 260 270 pF1KE3 SHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS XP_016 YSRELSPPPKEK 240 >>NP_036300 (OMIM: 607112) F-box only protein 2 [Homo sa (296 aa) initn: 662 init1: 242 opt: 501 Z-score: 606.3 bits: 120.1 E(85289): 4.9e-27 Smith-Waterman score: 614; 39.2% identity (63.4% similar) in 268 aa overlap (18-273:47-294) 10 20 30 40 pF1KE3 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCR :: :: ::..::. .: :: :: :: NP_036 SPEEQPEEASAEEERPEDQQEEEAAAAAAYLDELPEPLLLRVLAALPAAELVQACRLVCL 20 30 40 50 60 70 50 60 70 80 90 100 pF1KE3 AWRDIVDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDK-EEFPLCALARYCLRAPFG :...::: .:::. . :: : . . ..:. ..: . . : NP_036 RWKELVDGAPLWLLKCQQ----EG----LVPEGGVEEERDHWQQFYFLSKRR-------- 80 90 100 110 120 110 120 130 140 150 pF1KE3 RNLIFNSCGEQGFRGW-EVEHGGNGWAIEKNLTPVPGAPS---------QTCFVTSFEWC :::. : :::. ..:: .:::::.:: .:. .:: . . :..::::: NP_036 RNLLRNPCGEEDLEGWCDVEHGGDGWRVEE----LPGDSGVEFTHDESVKKYFASSFEWC 130 140 150 160 170 160 170 180 190 200 210 pF1KE3 SKRQLVDLVMEGVWQELLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSA : :..:: :: :.::::..: : : ::...: . ::.:.: :.::. .:. ...::. NP_036 RKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRSDAGCLYELTVKLLSEHENVLAEFSS 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE3 SPDPVLQWTERGC-RQVSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRI . : : .. : ..::.::..: :.:.: ::. :.: : : .:: ::.::: : NP_036 GQVAVPQDSDGGGWMEISHTFTDYGPGVRFVRFEHGGQDSVYWKGWFGARVTNSSVWVEP 240 250 260 270 280 290 pF1KE3 RLS >>XP_006710634 (OMIM: 605647) PREDICTED: F-box only prot (293 aa) initn: 571 init1: 409 opt: 492 Z-score: 595.5 bits: 118.1 E(85289): 2e-26 Smith-Waterman score: 601; 36.3% identity (64.0% similar) in 267 aa overlap (17-278:12-262) 10 20 30 40 50 60 pF1KE3 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL ... :: ..:.....::: :.:. :: :: :::..: :.: XP_006 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWK 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR . : :: . . . : : . : : ::. . :::. : :.:. . XP_006 RKCLR----EG---FITKDWDQPVA-DWKIF-------YFLRS-LHRNLLRNPCAEEDMF 60 70 80 90 130 140 150 160 170 pF1KE3 GWEVE-HGGNGWAIEK----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLD .:... .::. : .:. . : : . ::::.: : : :::::: :: :.:::: XP_006 AWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLD 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 SAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHV . . .: : ::..:: .:::.:::.:.: .. ...: : . ::.. .::.. XP_006 TFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYT 160 170 180 190 200 210 240 250 260 270 pF1KE3 FTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS :... .:.::. :.. :::.. :.: :: ::.::. : ... XP_006 FSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQE 220 230 240 250 260 270 XP_006 EAAQSPYRAVVQIF 280 290 >>XP_016856496 (OMIM: 605647) PREDICTED: F-box only prot (293 aa) initn: 571 init1: 409 opt: 492 Z-score: 595.5 bits: 118.1 E(85289): 2e-26 Smith-Waterman score: 601; 36.3% identity (64.0% similar) in 267 aa overlap (17-278:12-262) 10 20 30 40 50 60 pF1KE3 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL ... :: ..:.....::: :.:. :: :: :::..: :.: XP_016 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWK 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR . : :: . . . : : . : : ::. . :::. : :.:. . XP_016 RKCLR----EG---FITKDWDQPVA-DWKIF-------YFLRS-LHRNLLRNPCAEEDMF 60 70 80 90 130 140 150 160 170 pF1KE3 GWEVE-HGGNGWAIEK----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLD .:... .::. : .:. . : : . ::::.: : : :::::: :: :.:::: XP_016 AWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLD 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 SAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHV . . .: : ::..:: .:::.:::.:.: .. ...: : . ::.. .::.. XP_016 TFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYT 160 170 180 190 200 210 240 250 260 270 pF1KE3 FTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS :... .:.::. :.. :::.. :.: :: ::.::. : ... XP_016 FSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQE 220 230 240 250 260 270 XP_016 EAAQSPYRAVVQIF 280 290 >>XP_005263506 (OMIM: 605647) PREDICTED: F-box only prot (293 aa) initn: 571 init1: 409 opt: 492 Z-score: 595.5 bits: 118.1 E(85289): 2e-26 Smith-Waterman score: 601; 36.3% identity (64.0% similar) in 267 aa overlap (17-278:12-262) 10 20 30 40 50 60 pF1KE3 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL ... :: ..:.....::: :.:. :: :: :::..: :.: XP_005 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWK 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR . : :: . . . : : . : : ::. . :::. : :.:. . XP_005 RKCLR----EG---FITKDWDQPVA-DWKIF-------YFLRS-LHRNLLRNPCAEEDMF 60 70 80 90 130 140 150 160 170 pF1KE3 GWEVE-HGGNGWAIEK----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLD .:... .::. : .:. . : : . ::::.: : : :::::: :: :.:::: XP_005 AWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLD 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 SAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHV . . .: : ::..:: .:::.:::.:.: .. ...: : . ::.. .::.. XP_005 TFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYT 160 170 180 190 200 210 240 250 260 270 pF1KE3 FTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS :... .:.::. :.. :::.. :.: :: ::.::. : ... XP_005 FSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQE 220 230 240 250 260 270 XP_005 EAAQSPYRAVVQIF 280 290 >>XP_005263505 (OMIM: 605647) PREDICTED: F-box only prot (293 aa) initn: 571 init1: 409 opt: 492 Z-score: 595.5 bits: 118.1 E(85289): 2e-26 Smith-Waterman score: 601; 36.3% identity (64.0% similar) in 267 aa overlap (17-278:12-262) 10 20 30 40 50 60 pF1KE3 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL ... :: ..:.....::: :.:. :: :: :::..: :.: XP_005 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWK 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR . : :: . . . : : . : : ::. . :::. : :.:. . XP_005 RKCLR----EG---FITKDWDQPVA-DWKIF-------YFLRS-LHRNLLRNPCAEEDMF 60 70 80 90 130 140 150 160 170 pF1KE3 GWEVE-HGGNGWAIEK----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLD .:... .::. : .:. . : : . ::::.: : : :::::: :: :.:::: XP_005 AWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLD 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 SAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHV . . .: : ::..:: .:::.:::.:.: .. ...: : . ::.. .::.. XP_005 TFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYT 160 170 180 190 200 210 240 250 260 270 pF1KE3 FTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS :... .:.::. :.. :::.. :.: :: ::.::. : ... XP_005 FSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQE 220 230 240 250 260 270 XP_005 EAAQSPYRAVVQIF 280 290 >>NP_060908 (OMIM: 605647) F-box only protein 6 [Homo sa (293 aa) initn: 571 init1: 409 opt: 492 Z-score: 595.5 bits: 118.1 E(85289): 2e-26 Smith-Waterman score: 601; 36.3% identity (64.0% similar) in 267 aa overlap (17-278:12-262) 10 20 30 40 50 60 pF1KE3 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL ... :: ..:.....::: :.:. :: :: :::..: :.: NP_060 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWK 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR . : :: . . . : : . : : ::. . :::. : :.:. . NP_060 RKCLR----EG---FITKDWDQPVA-DWKIF-------YFLRS-LHRNLLRNPCAEEDMF 60 70 80 90 130 140 150 160 170 pF1KE3 GWEVE-HGGNGWAIEK----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLD .:... .::. : .:. . : : . ::::.: : : :::::: :: :.:::: NP_060 AWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLD 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 SAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHV . . .: : ::..:: .:::.:::.:.: .. ...: : . ::.. .::.. NP_060 TFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYT 160 170 180 190 200 210 240 250 260 270 pF1KE3 FTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS :... .:.::. :.. :::.. :.: :: ::.::. : ... NP_060 FSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQE 220 230 240 250 260 270 NP_060 EAAQSPYRAVVQIF 280 290 278 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:58:50 2016 done: Sun Nov 6 08:58:51 2016 Total Scan time: 6.410 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]