FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6724, 693 aa 1>>>pF1KE6724 693 - 693 aa - 693 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4810+/-0.00101; mu= 18.4076+/- 0.061 mean_var=64.8896+/-13.148, 0's: 0 Z-trim(104.3): 23 B-trim: 127 in 1/50 Lambda= 0.159216 statistics sampled from 7823 (7834) to 7823 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.606), E-opt: 0.2 (0.241), width: 16 Scan time: 2.280 The best scores are: opt bits E(32554) CCDS46941.1 GMPS gene_id:8833|Hs108|chr3 ( 693) 4552 1054.9 0 >>CCDS46941.1 GMPS gene_id:8833|Hs108|chr3 (693 aa) initn: 4552 init1: 4552 opt: 4552 Z-score: 5644.6 bits: 1054.9 E(32554): 0 Smith-Waterman score: 4552; 100.0% identity (100.0% similar) in 693 aa overlap (1-693:1-693) 10 20 30 40 50 60 pF1KE6 MALCNGDSKLENAGGDLKDGHHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MALCNGDSKLENAGGDLKDGHHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 AFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 KSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 KSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 SKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 VLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 VLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 HSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 HSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 EVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 EVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 ILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASVKKPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASVKKPH 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 TLLQRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDEPDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 TLLQRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDEPDW 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE6 ESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILR 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE6 ESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVE 610 620 630 640 650 660 670 680 690 pF1KE6 VVLKMVTEIKKIPGISRIMYDLTSKPPGTTEWE ::::::::::::::::::::::::::::::::: CCDS46 VVLKMVTEIKKIPGISRIMYDLTSKPPGTTEWE 670 680 690 693 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:43:59 2016 done: Tue Nov 8 15:44:00 2016 Total Scan time: 2.280 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]