FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2221, 335 aa 1>>>pF1KE2221 335 - 335 aa - 335 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9441+/-0.000706; mu= 17.5878+/- 0.043 mean_var=58.8601+/-11.977, 0's: 0 Z-trim(108.7): 19 B-trim: 0 in 0/48 Lambda= 0.167172 statistics sampled from 10368 (10379) to 10368 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.698), E-opt: 0.2 (0.319), width: 16 Scan time: 2.740 The best scores are: opt bits E(32554) CCDS5822.1 MEST gene_id:4232|Hs108|chr7 ( 335) 2299 562.6 1.7e-160 CCDS5823.1 MEST gene_id:4232|Hs108|chr7 ( 326) 2239 548.1 3.7e-156 CCDS59081.1 MEST gene_id:4232|Hs108|chr7 ( 292) 1415 349.3 2.2e-96 >>CCDS5822.1 MEST gene_id:4232|Hs108|chr7 (335 aa) initn: 2299 init1: 2299 opt: 2299 Z-score: 2995.1 bits: 562.6 E(32554): 1.7e-160 Smith-Waterman score: 2299; 100.0% identity (100.0% similar) in 335 aa overlap (1-335:1-335) 10 20 30 40 50 60 pF1KE2 MVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 DSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 FEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLSNGGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 FEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLSNGGI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 FPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLTPVFGPYTRPSESELWDMWAGIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 FPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLTPVFGPYTRPSESELWDMWAGIR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 NNDGNLVIDSLLQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYPEFLELYRKTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 NNDGNLVIDSLLQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYPEFLELYRKTL 250 260 270 280 290 300 310 320 330 pF1KE2 PRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF ::::::::::::::::::::::::::::::::::: CCDS58 PRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF 310 320 330 >>CCDS5823.1 MEST gene_id:4232|Hs108|chr7 (326 aa) initn: 2239 init1: 2239 opt: 2239 Z-score: 2917.1 bits: 548.1 E(32554): 3.7e-156 Smith-Waterman score: 2239; 100.0% identity (100.0% similar) in 326 aa overlap (10-335:1-326) 10 20 30 40 50 60 pF1KE2 MVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQ ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQ 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 DSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 DSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSI 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 FEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLSNGGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 FEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLSNGGI 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 FPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLTPVFGPYTRPSESELWDMWAGIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 FPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLTPVFGPYTRPSESELWDMWAGIR 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE2 NNDGNLVIDSLLQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYPEFLELYRKTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 NNDGNLVIDSLLQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYPEFLELYRKTL 240 250 260 270 280 290 310 320 330 pF1KE2 PRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF ::::::::::::::::::::::::::::::::::: CCDS58 PRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF 300 310 320 >>CCDS59081.1 MEST gene_id:4232|Hs108|chr7 (292 aa) initn: 1415 init1: 1415 opt: 1415 Z-score: 1843.8 bits: 349.3 E(32554): 2.2e-96 Smith-Waterman score: 1918; 89.6% identity (89.6% similar) in 326 aa overlap (10-335:1-292) 10 20 30 40 50 60 pF1KE2 MVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQ ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQ 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 DSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 DSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSI 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 FEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLSNGGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 FEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLSNGGI 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 FPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLTPVFGPYTRPSESELWDMWAGIR ::::::::::::::::::::::::::::::::::::: CCDS59 FPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGL----------------------- 180 190 200 250 260 270 280 290 300 pF1KE2 NNDGNLVIDSLLQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYPEFLELYRKTL ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 -----------LQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYPEFLELYRKTL 210 220 230 240 250 310 320 330 pF1KE2 PRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF ::::::::::::::::::::::::::::::::::: CCDS59 PRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF 260 270 280 290 335 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:46:20 2016 done: Mon Nov 7 01:46:20 2016 Total Scan time: 2.740 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]