FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1347, 379 aa 1>>>pF1KE1347 379 - 379 aa - 379 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8787+/-0.00086; mu= 10.1983+/- 0.052 mean_var=107.2754+/-21.526, 0's: 0 Z-trim(110.2): 23 B-trim: 209 in 1/50 Lambda= 0.123830 statistics sampled from 11418 (11428) to 11418 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.715), E-opt: 0.2 (0.351), width: 16 Scan time: 3.270 The best scores are: opt bits E(32554) CCDS5297.1 FGFR1OP gene_id:11116|Hs108|chr6 ( 379) 2381 435.7 3.2e-122 CCDS5296.1 FGFR1OP gene_id:11116|Hs108|chr6 ( 399) 1343 250.3 2.2e-66 CCDS75550.1 FGFR1OP gene_id:11116|Hs108|chr6 ( 351) 1170 219.4 4e-57 >>CCDS5297.1 FGFR1OP gene_id:11116|Hs108|chr6 (379 aa) initn: 2381 init1: 2381 opt: 2381 Z-score: 2307.7 bits: 435.7 E(32554): 3.2e-122 Smith-Waterman score: 2381; 99.5% identity (100.0% similar) in 379 aa overlap (1-379:1-379) 10 20 30 40 50 60 pF1KE1 MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SLRKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAE ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 SLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSKKANDEAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 GTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSKKANDEAN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFDDPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 QSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFDDPI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 PKPEKTYGLRNEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTVLKDLKLI ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 PKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTVLKDLKLI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 SDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIEEDLSVEIDDINTSDKLDDLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 SDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIEEDLSVEIDDINTSDKLDDLT 310 320 330 340 350 360 370 pF1KE1 QDLTVSQLSDVADYLEDVA ::::::::::::::::::: CCDS52 QDLTVSQLSDVADYLEDVA 370 >>CCDS5296.1 FGFR1OP gene_id:11116|Hs108|chr6 (399 aa) initn: 1335 init1: 1335 opt: 1343 Z-score: 1305.2 bits: 250.3 E(32554): 2.2e-66 Smith-Waterman score: 2331; 94.5% identity (95.0% similar) in 399 aa overlap (1-379:1-399) 10 20 30 40 50 60 pF1KE1 MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SLRKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAE ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 SLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAE 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 GTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSK------- ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 GTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQ 130 140 150 160 170 180 180 190 200 210 220 pF1KE1 -------------KANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDK ::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 GKKKTSGQKAGDKKANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDK 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE1 AGLCPDEDDMEGDSFFDDPIPKPEKTYGLRNEPRKQAGSLASLSDAPPLKSGLSSLAGAP ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: CCDS52 AGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAP 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE1 SLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 SLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIE 310 320 330 340 350 360 350 360 370 pF1KE1 EDLSVEIDDINTSDKLDDLTQDLTVSQLSDVADYLEDVA ::::::::::::::::::::::::::::::::::::::: CCDS52 EDLSVEIDDINTSDKLDDLTQDLTVSQLSDVADYLEDVA 370 380 390 >>CCDS75550.1 FGFR1OP gene_id:11116|Hs108|chr6 (351 aa) initn: 1168 init1: 1168 opt: 1170 Z-score: 1139.0 bits: 219.4 E(32554): 4e-57 Smith-Waterman score: 1995; 88.0% identity (90.7% similar) in 376 aa overlap (1-373:1-349) 10 20 30 40 50 60 pF1KE1 MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SLRKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAE ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSKKANDEAN :::::::::::::::::::::::::: ::::::: CCDS75 GTVGGPLLLEVIRRCQQKEKGPTTGE---------------------------KANDEAN 130 140 150 190 200 210 220 230 240 pF1KE1 QSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFDDPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 QSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFDDPI 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE1 PKPEKTYGLRNEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTVLKDLKLI ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 PKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTVLKDLKLI 220 230 240 250 260 270 310 320 330 340 350 pF1KE1 SDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIEEDLSVEIDDINTSDK-LDDL ::::::::::::::::::::::::::::::::::::::::::::::::::::::: . .: CCDS75 SDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIEEDLSVEIDDINTSDKTITQL 280 290 300 310 320 330 360 370 pF1KE1 TQDLTVSQL--SDVADYLEDVA :... : ...:: CCDS75 ECLLSIGALHFKNTADIF 340 350 379 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:46:56 2016 done: Mon Nov 7 01:46:57 2016 Total Scan time: 3.270 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]