FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4392, 415 aa 1>>>pF1KE4392 415 - 415 aa - 415 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3045+/-0.000748; mu= 17.0073+/- 0.045 mean_var=63.4378+/-12.464, 0's: 0 Z-trim(107.8): 8 B-trim: 7 in 1/51 Lambda= 0.161028 statistics sampled from 9800 (9807) to 9800 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.674), E-opt: 0.2 (0.301), width: 16 Scan time: 2.990 The best scores are: opt bits E(32554) CCDS4723.1 NEU1 gene_id:4758|Hs108|chr6 ( 415) 2857 672.3 2.3e-193 >>CCDS4723.1 NEU1 gene_id:4758|Hs108|chr6 (415 aa) initn: 2857 init1: 2857 opt: 2857 Z-score: 3584.9 bits: 672.3 E(32554): 2.3e-193 Smith-Waterman score: 2857; 100.0% identity (100.0% similar) in 415 aa overlap (1-415:1-415) 10 20 30 40 50 60 pF1KE4 MTGERPSTALPDRRWGPRILGFWGGCRVWVFAAIFLLLSLAASWSKAENDFGLVQPLVTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MTGERPSTALPDRRWGPRILGFWGGCRVWVFAAIFLLLSLAASWSKAENDFGLVQPLVTM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 EQLLWVSGRQIGSVDTFRIPLITATPRGTLLAFAEARKMSSSDEGAKFIALRRSMDQGST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 EQLLWVSGRQIGSVDTFRIPLITATPRGTLLAFAEARKMSSSDEGAKFIALRRSMDQGST 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 WSPTAFIVNDGDVPDGLNLGAVVSDVETGVVFLFYSLCAHKAGCQVASTMLVWSKDDGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 WSPTAFIVNDGDVPDGLNLGAVVSDVETGVVFLFYSLCAHKAGCQVASTMLVWSKDDGVS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 WSTPRNLSLDIGTEVFAPGPGSGIQKQREPRKGRLIVCGHGTLERDGVFCLLSDDHGASW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 WSTPRNLSLDIGTEVFAPGPGSGIQKQREPRKGRLIVCGHGTLERDGVFCLLSDDHGASW 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 RYGSGVSGIPYGQPKQENDFNPDECQPYELPDGSVVINARNQNNYHCHCRIVLRSYDACD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RYGSGVSGIPYGQPKQENDFNPDECQPYELPDGSVVINARNQNNYHCHCRIVLRSYDACD 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 TLRPRDVTFDPELVDPVVAAGAVVTSSGIVFFSNPAHPEFRVNLTLRWSFSNGTSWRKET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 TLRPRDVTFDPELVDPVVAAGAVVTSSGIVFFSNPAHPEFRVNLTLRWSFSNGTSWRKET 310 320 330 340 350 360 370 380 390 400 410 pF1KE4 VQLWPGPSGYSSLATLEGSMDGEEQAPQLYVLYEKGRNHYTESISVAKISVYGTL ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 VQLWPGPSGYSSLATLEGSMDGEEQAPQLYVLYEKGRNHYTESISVAKISVYGTL 370 380 390 400 410 415 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:17:44 2016 done: Tue Nov 8 01:17:44 2016 Total Scan time: 2.990 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]