FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1567, 418 aa 1>>>pF1KE1567 418 - 418 aa - 418 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.5309+/-0.000383; mu= 21.1155+/- 0.024 mean_var=57.2778+/-11.426, 0's: 0 Z-trim(111.5): 70 B-trim: 330 in 1/55 Lambda= 0.169465 statistics sampled from 20076 (20146) to 20076 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.611), E-opt: 0.2 (0.236), width: 16 Scan time: 8.310 The best scores are: opt bits E(85289) NP_005992 (OMIM: 602528) tubulin alpha-3C/D chain ( 450) 2649 656.2 4.8e-188 NP_001257328 (OMIM: 602529,611603) tubulin alpha-1 ( 451) 2626 650.5 2.4e-186 NP_006000 (OMIM: 602529,611603) tubulin alpha-1A c ( 451) 2626 650.5 2.4e-186 NP_006073 (OMIM: 602530) tubulin alpha-1B chain [H ( 451) 2615 647.8 1.5e-185 NP_005991 (OMIM: 191110,616208) tubulin alpha-4A c ( 448) 2568 636.3 4.4e-182 NP_001265481 (OMIM: 191110,616208) tubulin alpha-4 ( 433) 2466 611.4 1.4e-174 NP_061816 (OMIM: 605742,613180) tubulin alpha-8 ch ( 449) 2441 605.3 9.8e-173 NP_001257329 (OMIM: 602529,611603) tubulin alpha-1 ( 416) 2364 586.4 4.3e-167 NP_001180343 (OMIM: 605742,613180) tubulin alpha-8 ( 383) 2081 517.2 2.7e-146 XP_016860313 (OMIM: 191110,616208) PREDICTED: tubu ( 295) 1577 393.9 2.8e-109 NP_821133 (OMIM: 156610,191130,615771) tubulin bet ( 444) 1112 280.4 6.3e-75 NP_115914 (OMIM: 615103) tubulin beta-6 chain isof ( 446) 1104 278.4 2.5e-74 NP_001290453 (OMIM: 615103) tubulin beta-6 chain i ( 446) 1104 278.4 2.5e-74 NP_006079 (OMIM: 602660) tubulin beta-4B chain [Ho ( 445) 1100 277.4 4.8e-74 NP_006078 (OMIM: 602662) tubulin beta-4A chain iso ( 444) 1099 277.2 5.7e-74 NP_001276058 (OMIM: 602662) tubulin beta-4A chain ( 444) 1099 277.2 5.7e-74 NP_001276056 (OMIM: 602662) tubulin beta-4A chain ( 489) 1099 277.2 6.1e-74 NP_001276052 (OMIM: 602662) tubulin beta-4A chain ( 495) 1099 277.2 6.2e-74 NP_001060 (OMIM: 615101,615763) tubulin beta-2A ch ( 445) 1095 276.2 1.1e-73 NP_821080 (OMIM: 610031,612850) tubulin beta-2B ch ( 445) 1093 275.7 1.6e-73 NP_006077 (OMIM: 600638,602661,614039) tubulin bet ( 450) 1088 274.5 3.7e-73 NP_817124 (OMIM: 616768,616780) tubulin beta-8 cha ( 444) 1066 269.1 1.5e-71 NP_001280141 (OMIM: 156610,191130,615771) tubulin ( 464) 1050 265.2 2.4e-70 NP_110400 (OMIM: 612901,613112) tubulin beta-1 cha ( 451) 1042 263.3 9e-70 NP_001280143 (OMIM: 156610,191130,615771) tubulin ( 400) 981 248.3 2.5e-65 XP_016883574 (OMIM: 612901,613112) PREDICTED: tubu ( 429) 959 243.0 1.1e-63 NP_001290456 (OMIM: 615103) tubulin beta-6 chain i ( 374) 903 229.2 1.3e-59 NP_001280144 (OMIM: 156610,191130,615771) tubulin ( 372) 901 228.7 1.9e-59 NP_001280145 (OMIM: 156610,191130,615771) tubulin ( 372) 901 228.7 1.9e-59 NP_001276060 (OMIM: 602662) tubulin beta-4A chain ( 372) 896 227.5 4.3e-59 NP_001276059 (OMIM: 602662) tubulin beta-4A chain ( 372) 896 227.5 4.3e-59 NP_001184110 (OMIM: 600638,602661,614039) tubulin ( 378) 889 225.8 1.4e-58 XP_011517761 (OMIM: 616768,616780) PREDICTED: tubu ( 372) 880 223.6 6.5e-58 NP_001290457 (OMIM: 615103) tubulin beta-6 chain i ( 381) 842 214.3 4.2e-55 NP_001297244 (OMIM: 615101,615763) tubulin beta-2A ( 360) 829 211.1 3.6e-54 NP_001290455 (OMIM: 615103) tubulin beta-6 chain i ( 409) 829 211.2 4e-54 NP_001061 (OMIM: 191135,615412) tubulin gamma-1 ch ( 451) 767 196.0 1.6e-49 NP_057521 (OMIM: 605785) tubulin gamma-2 chain iso ( 451) 763 195.1 3.1e-49 XP_016871681 (OMIM: 616768,616780) PREDICTED: tubu ( 332) 741 189.6 1e-47 XP_016871682 (OMIM: 616768,616780) PREDICTED: tubu ( 332) 741 189.6 1e-47 NP_001290458 (OMIM: 615103) tubulin beta-6 chain i ( 300) 619 159.7 9e-39 NP_001290459 (OMIM: 615103) tubulin beta-6 chain i ( 300) 619 159.7 9e-39 XP_011517762 (OMIM: 616768,616780) PREDICTED: tubu ( 291) 566 146.7 7e-35 NP_001307438 (OMIM: 605785) tubulin gamma-2 chain ( 460) 494 129.3 2e-29 NP_057346 (OMIM: 607345) tubulin epsilon chain [Ho ( 475) 439 115.9 2.3e-25 NP_001280142 (OMIM: 156610,191130,615771) tubulin ( 242) 399 105.8 1.2e-22 XP_016866407 (OMIM: 607345) PREDICTED: tubulin eps ( 431) 392 104.3 6e-22 XP_016879942 (OMIM: 605785) PREDICTED: tubulin gam ( 298) 388 103.2 8.9e-22 XP_011522916 (OMIM: 605785) PREDICTED: tubulin gam ( 298) 388 103.2 8.9e-22 XP_016880205 (OMIM: 607344) PREDICTED: tubulin del ( 375) 372 99.4 1.6e-20 >>NP_005992 (OMIM: 602528) tubulin alpha-3C/D chain [Hom (450 aa) initn: 2649 init1: 2649 opt: 2649 Z-score: 3496.9 bits: 656.2 E(85289): 4.8e-188 Smith-Waterman score: 2733; 92.9% identity (92.9% similar) in 450 aa overlap (1-418:1-450) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD---------------------------- :::::::::::::::::::::::::::::::: NP_005 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 400 410 pF1KE1 ----LAALEKDYEEVGVDSVEAEAEEGEEY :::::::::::::::::::::::::: NP_005 AREDLAALEKDYEEVGVDSVEAEAEEGEEY 430 440 450 >>NP_001257328 (OMIM: 602529,611603) tubulin alpha-1A ch (451 aa) initn: 2652 init1: 2626 opt: 2626 Z-score: 3466.5 bits: 650.5 E(85289): 2.4e-186 Smith-Waterman score: 2686; 90.5% identity (92.5% similar) in 451 aa overlap (1-418:1-451) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD ::::::::::::::.:::::::::::::::::::::::::::::::::::::::.::::: NP_001 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA ::::::: ::::::::.::::::::::::.:::::::::::::::::::.:::::::::: NP_001 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: NP_001 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD---------------------------- :::::::::::::::::::::::::::::::: NP_001 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 400 410 pF1KE1 ----LAALEKDYEEVGVDSVEAEAEE-GEEY .::::::::::::::::.:.:: :::: NP_001 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY 430 440 450 >>NP_006000 (OMIM: 602529,611603) tubulin alpha-1A chain (451 aa) initn: 2652 init1: 2626 opt: 2626 Z-score: 3466.5 bits: 650.5 E(85289): 2.4e-186 Smith-Waterman score: 2686; 90.5% identity (92.5% similar) in 451 aa overlap (1-418:1-451) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD ::::::::::::::.:::::::::::::::::::::::::::::::::::::::.::::: NP_006 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA ::::::: ::::::::.::::::::::::.:::::::::::::::::::.:::::::::: NP_006 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: NP_006 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD---------------------------- :::::::::::::::::::::::::::::::: NP_006 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 400 410 pF1KE1 ----LAALEKDYEEVGVDSVEAEAEE-GEEY .::::::::::::::::.:.:: :::: NP_006 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY 430 440 450 >>NP_006073 (OMIM: 602530) tubulin alpha-1B chain [Homo (451 aa) initn: 2641 init1: 2615 opt: 2615 Z-score: 3452.0 bits: 647.8 E(85289): 1.5e-185 Smith-Waterman score: 2675; 90.0% identity (92.5% similar) in 451 aa overlap (1-418:1-451) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD ::::::::::::::.:::::::::::::::::::::::::::::::::::::::.::::: NP_006 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA ::::::: ::::::::.::::::::::::.:::::::::::::::::::.:::::::::: NP_006 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: NP_006 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP ::::::::::::::::.::::::::::::::::::::::.:::::::::::::::::::: NP_006 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD---------------------------- :::::::::::::::::::::::::::::::: NP_006 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 400 410 pF1KE1 ----LAALEKDYEEVGVDSVEAEAEE-GEEY .::::::::::::::::.:.:: :::: NP_006 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY 430 440 450 >>NP_005991 (OMIM: 191110,616208) tubulin alpha-4A chain (448 aa) initn: 2672 init1: 2568 opt: 2568 Z-score: 3389.9 bits: 636.3 E(85289): 4.4e-182 Smith-Waterman score: 2607; 87.3% identity (91.3% similar) in 449 aa overlap (1-417:1-448) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK ::::::.::::::::.:::::::::::::::::::::::::::::::::.::: :::::: NP_005 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD ::::::::::::::.::.:.: ::::::::::::::::::::::::::::::::.: ::: NP_005 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA :::::.: ::::::::.::::::::::::.:::::::::::::::::::.:::::::::: NP_005 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: NP_005 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP ::::::::::::::::.::::::::::::::::.:::::.:::::::::::::::::::: NP_005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD---------------------------- :::::::::::::::::::::::::::::::: NP_005 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 400 410 pF1KE1 ----LAALEKDYEEVGVDSVEAEAEEGEEY .:::::::::::.:: : : .:::: NP_005 AREDMAALEKDYEEVGIDSYEDE-DEGEE 430 440 >>NP_001265481 (OMIM: 191110,616208) tubulin alpha-4A ch (433 aa) initn: 2570 init1: 2466 opt: 2466 Z-score: 3255.4 bits: 611.4 E(85289): 1.4e-174 Smith-Waterman score: 2505; 87.1% identity (91.0% similar) in 434 aa overlap (16-417:1-433) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK .:::::::::::::::::::::::::::::::::.::: :::::: NP_001 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 10 20 30 40 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD ::::::::::::::.::.:.: ::::::::::::::::::::::::::::::::.: ::: NP_001 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA :::::.: ::::::::.::::::::::::.:::::::::::::::::::.:::::::::: NP_001 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: NP_001 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP ::::::::::::::::.::::::::::::::::.:::::.:::::::::::::::::::: NP_001 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 290 300 310 320 330 340 370 380 390 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD---------------------------- :::::::::::::::::::::::::::::::: NP_001 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 350 360 370 380 390 400 400 410 pF1KE1 ----LAALEKDYEEVGVDSVEAEAEEGEEY .:::::::::::.:: : : .:::: NP_001 AREDMAALEKDYEEVGIDSYEDE-DEGEE 410 420 430 >>NP_061816 (OMIM: 605742,613180) tubulin alpha-8 chain (449 aa) initn: 2545 init1: 2441 opt: 2441 Z-score: 3222.1 bits: 605.3 E(85289): 9.8e-173 Smith-Waterman score: 2481; 83.6% identity (89.8% similar) in 450 aa overlap (1-418:1-449) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK ::::::.::::::::::::::::.::::::: :: . .. . . ::::.::::::: :: NP_061 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD ::::::..:::::::::::.:::::::::::::::::::::::::::::.::: .::::: NP_061 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA :::::.: :.:::::::::::::::::::.::::::::.::::::::::::::::::::: NP_061 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: NP_061 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::.::::.:::::::::::::::::..:::: . NP_061 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP :::::::::::::::::::::::::::::.:::.:::::::::::::::::::::::::: NP_061 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD---------------------------- :::::::::::::::::::::::::::::::: NP_061 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 400 410 pF1KE1 ----LAALEKDYEEVGVDSVEAEAEEGEEY ::::::::::::.:: : : .::::. NP_061 AREDLAALEKDYEEVGTDSFEEE-NEGEEF 430 440 >>NP_001257329 (OMIM: 602529,611603) tubulin alpha-1A ch (416 aa) initn: 2390 init1: 2364 opt: 2364 Z-score: 3120.8 bits: 586.4 E(85289): 4.3e-167 Smith-Waterman score: 2424; 89.7% identity (91.8% similar) in 416 aa overlap (36-418:1-416) 10 20 30 40 50 60 pF1KE1 SIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRA :::::::::::::::::::::::::::::: NP_001 MPSDKTIGGGDDSFNTFFSETGAGKHVPRA 10 20 30 70 80 90 100 110 120 pF1KE1 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL :::::::::.:::::::::::::::::::::::::::::::::::::::.:::::::::: NP_001 VFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKL 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE1 ADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPY :: ::::::::.::::::::::::.:::::::::::::::::::.::::::::::::::: NP_001 ADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE1 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE1 GALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKC 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE1 DPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 280 290 300 310 320 330 370 380 390 pF1KE1 GDLAKVQRAVCMLSNTTAIAEAWARLD--------------------------------L ::::::::::::::::::::::::::: . NP_001 GDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 340 350 360 370 380 390 400 410 pF1KE1 AALEKDYEEVGVDSVEAEAEE-GEEY ::::::::::::::::.:.:: :::: NP_001 AALEKDYEEVGVDSVEGEGEEEGEEY 400 410 >>NP_001180343 (OMIM: 605742,613180) tubulin alpha-8 cha (383 aa) initn: 2185 init1: 2081 opt: 2081 Z-score: 2747.4 bits: 517.2 E(85289): 2.7e-146 Smith-Waterman score: 2121; 85.1% identity (90.1% similar) in 383 aa overlap (68-418:2-383) 40 50 60 70 80 90 pF1KE1 SDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE .:::::::::::.::::::::::::::::: NP_001 MIDLEPTVVDEVRAGTYRQLFHPEQLITGKE 10 20 30 100 110 120 130 140 150 pF1KE1 DAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERL ::::::::::::.::: .::::::::::.: :.:::::::::::::::::::.::::::: NP_001 DAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERL 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE1 SVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE1 DIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVIS ::::::::::::::.:::::::::::::::::::::::::::::::::::::.::::.:: NP_001 DIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIIS 160 170 180 190 200 210 280 290 300 310 320 330 pF1KE1 AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT :::::::::::::::..:::: .:::::::::::::::::::::::::::::.:::.::: NP_001 AEKAYHEQLSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKT 220 230 240 250 260 270 340 350 360 370 380 390 pF1KE1 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD----- ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 280 290 300 310 320 330 400 410 pF1KE1 ---------------------------LAALEKDYEEVGVDSVEAEAEEGEEY ::::::::::::.:: : : .::::. NP_001 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDSFE-EENEGEEF 340 350 360 370 380 >>XP_016860313 (OMIM: 191110,616208) PREDICTED: tubulin (295 aa) initn: 1681 init1: 1577 opt: 1577 Z-score: 2083.0 bits: 393.9 E(85289): 2.8e-109 Smith-Waterman score: 1616; 85.5% identity (88.2% similar) in 296 aa overlap (154-417:1-295) 130 140 150 160 170 180 pF1KE1 KLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVE ::::::::::::::::.::::::::::::: XP_016 MERLSVDYGKKSKLEFSIYPAPQVSTAVVE 10 20 30 190 200 210 220 230 240 pF1KE1 PYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLR ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: XP_016 PYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLR 40 50 60 70 80 90 250 260 270 280 290 300 pF1KE1 FDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMV 100 110 120 130 140 150 310 320 330 340 350 360 pF1KE1 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV :::::::::::::.::::::::::::::::.:::::.::::::::::::::::::::::: XP_016 KCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVV 160 170 180 190 200 210 370 380 390 pF1KE1 PGGDLAKVQRAVCMLSNTTAIAEAWARLD------------------------------- ::::::::::::::::::::::::::::: XP_016 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 220 230 240 250 260 270 400 410 pF1KE1 -LAALEKDYEEVGVDSVEAEAEEGEEY .:::::::::::.:: : : .:::: XP_016 DMAALEKDYEEVGIDSYEDE-DEGEE 280 290 418 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:49:27 2016 done: Mon Nov 7 01:49:29 2016 Total Scan time: 8.310 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]