FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4559, 684 aa 1>>>pF1KE4559 684 - 684 aa - 684 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 14.6013+/-0.000549; mu= -19.5073+/- 0.035 mean_var=799.1585+/-163.705, 0's: 0 Z-trim(123.4): 523 B-trim: 0 in 0/61 Lambda= 0.045369 statistics sampled from 42466 (43046) to 42466 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.737), E-opt: 0.2 (0.505), width: 16 Scan time: 12.330 The best scores are: opt bits E(85289) NP_001844 (OMIM: 120270,600969,603932) collagen al ( 684) 5102 349.6 2.2e-95 XP_011526847 (OMIM: 120270,600969,603932) PREDICTE ( 552) 3998 277.3 1.1e-73 XP_016883155 (OMIM: 120270,600969,603932) PREDICTE ( 486) 3526 246.3 2e-64 XP_006710428 (OMIM: 120260,600204,603932,614284) P ( 689) 2422 174.2 1.4e-42 NP_001843 (OMIM: 120260,600204,603932,614284) coll ( 689) 2422 174.2 1.4e-42 XP_016855821 (OMIM: 120260,600204,603932,614284) P ( 693) 2408 173.3 2.7e-42 NP_511040 (OMIM: 120210,614134,614135) collagen al ( 678) 2394 172.4 5.1e-42 NP_001842 (OMIM: 120210,614134,614135) collagen al ( 921) 2368 170.8 2e-41 XP_016855822 (OMIM: 120260,600204,603932,614284) P ( 595) 2053 150.0 2.4e-35 XP_011539018 (OMIM: 120260,600204,603932,614284) P ( 599) 2039 149.1 4.6e-35 XP_011539017 (OMIM: 120260,600204,603932,614284) P ( 599) 2039 149.1 4.6e-35 XP_011533732 (OMIM: 120210,614134,614135) PREDICTE ( 688) 1994 146.2 3.9e-34 XP_011515191 (OMIM: 610026) PREDICTED: collagen al (1058) 1976 145.2 1.2e-33 XP_016868641 (OMIM: 610026) PREDICTED: collagen al (1264) 1976 145.3 1.3e-33 XP_011515189 (OMIM: 610026) PREDICTED: collagen al (1264) 1976 145.3 1.3e-33 XP_016865735 (OMIM: 120210,614134,614135) PREDICTE ( 748) 1968 144.5 1.3e-33 XP_016868640 (OMIM: 610026) PREDICTED: collagen al (1552) 1976 145.4 1.5e-33 XP_016868639 (OMIM: 610026) PREDICTED: collagen al (1564) 1976 145.4 1.5e-33 XP_011515188 (OMIM: 610026) PREDICTED: collagen al (1577) 1976 145.4 1.5e-33 XP_011515187 (OMIM: 610026) PREDICTED: collagen al (1588) 1976 145.4 1.5e-33 XP_011515186 (OMIM: 610026) PREDICTED: collagen al (1593) 1976 145.4 1.5e-33 XP_011515185 (OMIM: 610026) PREDICTED: collagen al (1606) 1976 145.4 1.5e-33 XP_011533731 (OMIM: 120210,614134,614135) PREDICTE ( 931) 1968 144.7 1.5e-33 NP_690848 (OMIM: 610026) collagen alpha-1(XXII) ch (1626) 1913 141.3 2.7e-32 NP_149162 (OMIM: 108300,120140,132450,150600,15121 (1418) 1851 137.2 4.1e-31 XP_016874319 (OMIM: 108300,120140,132450,150600,15 (1465) 1851 137.2 4.2e-31 NP_001835 (OMIM: 108300,120140,132450,150600,15121 (1487) 1851 137.2 4.3e-31 XP_016874318 (OMIM: 108300,120140,132450,150600,15 (1534) 1851 137.2 4.3e-31 XP_016874317 (OMIM: 108300,120140,132450,150600,15 (1535) 1851 137.2 4.3e-31 XP_016869755 (OMIM: 120215,130000) PREDICTED: coll (1715) 1838 136.4 8.4e-31 NP_001265003 (OMIM: 120215,130000) collagen alpha- (1838) 1838 136.5 8.8e-31 NP_000084 (OMIM: 120215,130000) collagen alpha-1(V (1838) 1838 136.5 8.8e-31 XP_011508875 (OMIM: 120190,130000) PREDICTED: coll (1453) 1833 136.0 9.5e-31 NP_000384 (OMIM: 120190,130000) collagen alpha-2(V (1499) 1833 136.1 9.7e-31 NP_000080 (OMIM: 120160,130060,166210,166220,16671 (1366) 1821 135.2 1.6e-30 XP_011522643 (OMIM: 114000,120150,130000,130060,16 (1398) 1788 133.1 7.1e-30 XP_016855826 (OMIM: 120280,154780,228520,603932,60 (1323) 1773 132.1 1.4e-29 NP_000079 (OMIM: 114000,120150,130000,130060,16620 (1464) 1774 132.2 1.4e-29 XP_005257115 (OMIM: 114000,120150,130000,130060,16 (1374) 1771 132.0 1.5e-29 NP_542197 (OMIM: 120280,154780,228520,603932,60484 (1690) 1773 132.2 1.6e-29 NP_001177638 (OMIM: 120280,154780,228520,603932,60 (1767) 1773 132.2 1.6e-29 NP_001845 (OMIM: 120280,154780,228520,603932,60484 (1806) 1773 132.2 1.7e-29 NP_542196 (OMIM: 120280,154780,228520,603932,60484 (1818) 1773 132.2 1.7e-29 XP_011517442 (OMIM: 608461,615155) PREDICTED: coll (1842) 1773 132.2 1.7e-29 XP_016855824 (OMIM: 120280,154780,228520,603932,60 (1855) 1773 132.2 1.7e-29 XP_016855823 (OMIM: 120280,154780,228520,603932,60 (1857) 1773 132.2 1.7e-29 XP_016884752 (OMIM: 301050,303630) PREDICTED: coll (1136) 1744 130.1 4.6e-29 NP_203699 (OMIM: 301050,303630) collagen alpha-5(I (1691) 1744 130.3 6e-29 XP_011529151 (OMIM: 301050,303630) PREDICTED: coll (1696) 1744 130.3 6e-29 XP_006717373 (OMIM: 608461,615155) PREDICTED: coll (1087) 1735 129.5 6.7e-29 >>NP_001844 (OMIM: 120270,600969,603932) collagen alpha- (684 aa) initn: 5102 init1: 5102 opt: 5102 Z-score: 1833.3 bits: 349.6 E(85289): 2.2e-95 Smith-Waterman score: 5102; 100.0% identity (100.0% similar) in 684 aa overlap (1-684:1-684) 10 20 30 40 50 60 pF1KE4 MAGPRACAPLLLLLLLGELLAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAGPRACAPLLLLLLLGELLAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 PGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 GPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 GMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 GPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPGPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPGPQ 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 GLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRGELGPKGTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRGELGPKGTQ 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 GPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGD 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE4 RGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGDPGLPGAIGAQGTPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGDPGLPGAIGAQGTPG 610 620 630 640 650 660 670 680 pF1KE4 ICDTSACQGAVLGGVGEKSGSRSS :::::::::::::::::::::::: NP_001 ICDTSACQGAVLGGVGEKSGSRSS 670 680 >>XP_011526847 (OMIM: 120270,600969,603932) PREDICTED: c (552 aa) initn: 3998 init1: 3998 opt: 3998 Z-score: 1443.9 bits: 277.3 E(85289): 1.1e-73 Smith-Waterman score: 3998; 100.0% identity (100.0% similar) in 535 aa overlap (1-535:1-535) 10 20 30 40 50 60 pF1KE4 MAGPRACAPLLLLLLLGELLAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAGPRACAPLLLLLLLGELLAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 PGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 GPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 GMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 GPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPGPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPGPQ 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 GLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRGELGPKGTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRGELGPKGTQ 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 GPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQL ::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGMISEGKLAS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGD XP_011 GRQHRVDILCFT 550 >>XP_016883155 (OMIM: 120270,600969,603932) PREDICTED: c (486 aa) initn: 3517 init1: 3517 opt: 3526 Z-score: 1277.6 bits: 246.3 E(85289): 2e-64 Smith-Waterman score: 3526; 97.5% identity (98.3% similar) in 483 aa overlap (1-482:1-483) 10 20 30 40 50 60 pF1KE4 MAGPRACAPLLLLLLLGELLAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MAGPRACAPLLLLLLLGELLAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 PGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 GPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 GMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 GPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPGPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPGPQ 370 380 390 400 410 420 430 440 450 460 470 pF1KE4 GLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGS-RGELGPKGT ::::::::::::::::::::::::::::::::::::::::::::::: . ::. : . XP_016 GLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGEEVTLRGDGGNASP 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE4 QGPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQ . : XP_016 RLPPPC >>XP_006710428 (OMIM: 120260,600204,603932,614284) PREDI (689 aa) initn: 3370 init1: 1317 opt: 2422 Z-score: 885.2 bits: 174.2 E(85289): 1.4e-42 Smith-Waterman score: 2422; 51.0% identity (65.8% similar) in 681 aa overlap (1-670:1-672) 10 20 30 40 50 pF1KE4 MAGPRACAPLLLLLLLGELLAAAGAQRVGLPG---PPGPPGPPGKPGQDGIDGEAGPPGL ::. : .: ::.:: .... : :: : :: ::::::::: ::.:::::. :::: XP_006 MAAATA-SPRSLLVLL-QVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGK 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 PGPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGK ::::::: ::: : : : ::.::::: : ::: : :: .:. : :::::: : XP_006 AGPPGPKGEPGKAGPDGP---DGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGP 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 GLPGPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLP--EGATDLQCP :. :::: : : :: ::.::: : : : ::::::: ::.::.. ::..:. :: XP_006 GFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCP 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 SICPPGPPGPPGMPGFKGPTGYKG---EQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRG . :::: ::::. : :: .: .: . :. :: : ::: : : :.:: ::.: XP_006 TNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGP---PGPQG 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 LRGLPGPLGPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPG .:: :: :: :. :: :..: : :: : :..: ::: : : ::: : :: .: : XP_006 IRGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQG 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 VAGPSGEPGMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERG ..::.: : :: .:..:.:: :.:: ::. : :: : .:: :.::. :.:: :..: XP_006 ITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQG 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE4 RAGELGEAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMG . : : : :: :: :. : :: : : :. : : .:: : :: .: :: :: .: XP_006 EPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQG 360 370 380 390 400 410 420 430 440 450 460 470 pF1KE4 DPGLPGPQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRG ::.:::::: : ::.: : .::.: : : ::::.::: : :: ::::..: :: XP_006 PPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRG 420 430 440 450 460 470 480 490 500 510 520 530 pF1KE4 ELGPKGTQGPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGM : : : .: :. :::: :::::: :: : :::: :. :: :..:..:.: .. : XP_006 EPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKM 480 490 500 510 520 530 540 550 560 570 580 pF1KE4 ISEQIAQLAAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIG---HPGARGPPGYRGPTGEL ..::.:..:. .. : :..: :: ::::::: ::. : ::: :: :: : .:.. XP_006 LQEQLAEVAVSAKRE-ALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQI 540 550 560 570 580 590 590 600 610 620 630 640 pF1KE4 GDPGPRGNQGDRGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGDPGL :. ::.:..:..:: : .: : : : : : : :: . .:.:: : :: ::. : XP_006 GNTGPKGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGR 600 610 620 630 640 650 650 660 670 680 pF1KE4 PGAIGAQGTPGICDTSACQGAVLGGVGEKSGSRSS :: : : ::.:. .:: :: XP_006 PGLPGPVGLPGFCEPAACLGASAYASARLTEPGSIKGP 660 670 680 >>NP_001843 (OMIM: 120260,600204,603932,614284) collagen (689 aa) initn: 3370 init1: 1317 opt: 2422 Z-score: 885.2 bits: 174.2 E(85289): 1.4e-42 Smith-Waterman score: 2422; 51.0% identity (65.8% similar) in 681 aa overlap (1-670:1-672) 10 20 30 40 50 pF1KE4 MAGPRACAPLLLLLLLGELLAAAGAQRVGLPG---PPGPPGPPGKPGQDGIDGEAGPPGL ::. : .: ::.:: .... : :: : :: ::::::::: ::.:::::. :::: NP_001 MAAATA-SPRSLLVLL-QVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGK 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 PGPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGK ::::::: ::: : : : ::.::::: : ::: : :: .:. : :::::: : NP_001 AGPPGPKGEPGKAGPDGP---DGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGP 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 GLPGPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLP--EGATDLQCP :. :::: : : :: ::.::: : : : ::::::: ::.::.. ::..:. :: NP_001 GFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCP 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 SICPPGPPGPPGMPGFKGPTGYKG---EQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRG . :::: ::::. : :: .: .: . :. :: : ::: : : :.:: ::.: NP_001 TNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGP---PGPQG 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 LRGLPGPLGPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPG .:: :: :: :. :: :..: : :: : :..: ::: : : ::: : :: .: : NP_001 IRGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQG 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 VAGPSGEPGMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERG ..::.: : :: .:..:.:: :.:: ::. : :: : .:: :.::. :.:: :..: NP_001 ITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQG 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE4 RAGELGEAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMG . : : : :: :: :. : :: : : :. : : .:: : :: .: :: :: .: NP_001 EPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQG 360 370 380 390 400 410 420 430 440 450 460 470 pF1KE4 DPGLPGPQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRG ::.:::::: : ::.: : .::.: : : ::::.::: : :: ::::..: :: NP_001 PPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRG 420 430 440 450 460 470 480 490 500 510 520 530 pF1KE4 ELGPKGTQGPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGM : : : .: :. :::: :::::: :: : :::: :. :: :..:..:.: .. : NP_001 EPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKM 480 490 500 510 520 530 540 550 560 570 580 pF1KE4 ISEQIAQLAAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIG---HPGARGPPGYRGPTGEL ..::.:..:. .. : :..: :: ::::::: ::. : ::: :: :: : .:.. NP_001 LQEQLAEVAVSAKRE-ALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQI 540 550 560 570 580 590 590 600 610 620 630 640 pF1KE4 GDPGPRGNQGDRGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGDPGL :. ::.:..:..:: : .: : : : : : : :: . .:.:: : :: ::. : NP_001 GNTGPKGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGR 600 610 620 630 640 650 650 660 670 680 pF1KE4 PGAIGAQGTPGICDTSACQGAVLGGVGEKSGSRSS :: : : ::.:. .:: :: NP_001 PGLPGPVGLPGFCEPAACLGASAYASARLTEPGSIKGP 660 670 680 >>XP_016855821 (OMIM: 120260,600204,603932,614284) PREDI (693 aa) initn: 3145 init1: 1718 opt: 2408 Z-score: 880.3 bits: 173.3 E(85289): 2.7e-42 Smith-Waterman score: 2408; 50.7% identity (65.5% similar) in 685 aa overlap (1-670:1-676) 10 20 30 40 50 pF1KE4 MAGPRACAPLLLLLLLGELLAAAGAQRVGLPG---PPGPPGPPGKPGQDGIDGEAGPPGL ::. : .: ::.:: .... : :: : :: ::::::::: ::.:::::. :::: XP_016 MAAATA-SPRSLLVLL-QVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGK 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 PGPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGK ::::::: ::: : : : ::.::::: : ::: : :: .:. : :::::: : XP_016 AGPPGPKGEPGKAGPDGP---DGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGP 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 GLPGPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLP--EGATDL--- :. :::: : : :: ::.::: : : : ::::::: ::.::.. ::..:. XP_016 GFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLVR 120 130 140 150 160 170 180 190 200 210 220 pF1KE4 -QCPSICPPGPPGPPGMPGFKGPTGYKG---EQGEVGKDGEKGDPGPPGPAGLPGSVGLQ .::. :::: ::::. : :: .: .: . :. :: : ::: : : :.:: XP_016 DECPTNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGP---P 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE4 GPRGLRGLPGPLGPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPK ::.:.:: :: :: :. :: :..: : :: : :..: ::: : : ::: : :: . XP_016 GPQGIRGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIR 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE4 GTPGVAGPSGEPGMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEK : :..::.: : :: .:..:.:: :.:: ::. : :: : .:: :.::. :.:: XP_016 GPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGP 300 310 320 330 340 350 350 360 370 380 390 400 pF1KE4 GERGRAGELGEAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQK :..:. : : : :: :: :. : :: : : :. : : .:: : :: .: :: : XP_016 GDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPK 360 370 380 390 400 410 410 420 430 440 450 460 pF1KE4 GSMGDPGLPGPQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGES : .: ::.:::::: : ::.: : .::.: : : ::::.::: : :: ::::.. XP_016 GEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQ 420 430 440 450 460 470 470 480 490 500 510 520 pF1KE4 GSRGELGPKGTQGPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIREL : ::: : : .: :. :::: :::::: :: : :::: :. :: :..:..:.: .. XP_016 GVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDV 480 490 500 510 520 530 530 540 550 560 570 580 pF1KE4 CGGMISEQIAQLAAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIG---HPGARGPPGYRGP :..::.:..:. .. : :..: :: ::::::: ::. : ::: :: :: : XP_016 ALKMLQEQLAEVAVSAKRE-ALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGA 540 550 560 570 580 590 590 600 610 620 630 640 pF1KE4 TGELGDPGPRGNQGDRGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPG .:..:. ::.:..:..:: : .: : : : : : : :: . .:.:: : :: :: XP_016 VGQIGNTGPKGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPG 600 610 620 630 640 650 650 660 670 680 pF1KE4 DPGLPGAIGAQGTPGICDTSACQGAVLGGVGEKSGSRSS . : :: : : ::.:. .:: :: XP_016 EAGRPGLPGPVGLPGFCEPAACLGASAYASARLTEPGSIKGP 660 670 680 690 >>NP_511040 (OMIM: 120210,614134,614135) collagen alpha- (678 aa) initn: 3341 init1: 1808 opt: 2394 Z-score: 875.4 bits: 172.4 E(85289): 5.1e-42 Smith-Waterman score: 2394; 50.8% identity (66.1% similar) in 663 aa overlap (11-667:11-663) 10 20 30 40 50 60 pF1KE4 MAGPRACAPLLLLLLLGELLAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGP : ::::: : :: : :::::::::: :: :::::. :: : ::: NP_511 MAWTARDRGALGLLLLGLCLCAAQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGPPGP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 PGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLP ::: : ::::: ::. :: ::.::::: :: :: :. :..: : :: :. :.:.: NP_511 PGPAGEPGKPGAPGK---PGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIP 70 80 90 100 110 130 140 150 160 170 180 pF1KE4 GPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPP :::: :..: :: .: :: : :: :::::::::: :.. : ::. ::: NP_511 GPPGPPGTAGLPGELGRVGPVGD---PGRRGPPGPPGPPGPRGTIGFHDGDPLCPNACPP 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE4 GPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPL : : ::.::..: : ::: :: :..:.::. : : : :. : : .::::. : . NP_511 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIV 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE4 GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEP : :..: :. : :: : :: ::.:.::: : ::::: : : .: ::. ::.:. NP_511 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDT 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE4 GMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEA :.:: ::..:.::. : ::: :. : ::. : .::::.:: :.:: ::.: .: :. NP_511 GLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKP 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE4 GPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPGPQ : :. : ::. : ::: : : .: :. : :: :.::. : :. :: : :::::: NP_511 GQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPP 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE4 GLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRGELGPKGTQ :: : :::: : ::::.:: .: .: :..:::: :: :::: .:. :: : .: . NP_511 GLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPE 420 430 440 450 460 470 490 500 510 520 530 540 pF1KE4 GPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQL : : ::.: ::::: :.:: :. :. : : ::. ..:.:...: .:.:..:.. NP_511 GSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQEHFAEM 480 490 500 510 520 530 550 560 570 580 590 pF1KE4 AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGA---RGPPGYRGPTGELGDPGPRGN :: :..: :. : :: :::::::::: : :: :: :: .:: : :: ::.:. NP_511 AASLKRP-DSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGD 540 550 560 570 580 590 600 610 620 630 640 650 pF1KE4 QGDRGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGD---PGLPGAIG :..:..: : : :.: : : : :: .. :..: :: :::: ::.:: : NP_511 LGEKGERGPPGRG---PNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPG 600 610 620 630 640 650 660 670 680 pF1KE4 AQGTPGICDTSACQGAVLGGVGEKSGSRSS : ::.:. ..: NP_511 PPGLPGFCEPASCTMQAGQRAFNKGPDP 660 670 >>NP_001842 (OMIM: 120210,614134,614135) collagen alpha- (921 aa) initn: 5409 init1: 1808 opt: 2368 Z-score: 864.6 bits: 170.8 E(85289): 2e-41 Smith-Waterman score: 2368; 50.9% identity (66.7% similar) in 645 aa overlap (29-667:272-906) 10 20 30 40 50 pF1KE4 MAGPRACAPLLLLLLLGELLAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLP : :::::::::: :: :::::. :: : : NP_001 CDPLRPRRETCHELPARITPSQTTDERGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGPP 250 260 270 280 290 300 60 70 80 90 100 110 pF1KE4 GPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKG ::::: : ::::: ::. :: ::.::::: :: :: :. :..: : :: :. :.: NP_001 GPPGPAGEPGKPGAPGK---PGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRG 310 320 330 340 350 120 130 140 150 160 170 pF1KE4 LPGPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSIC .::::: :..: :: .: :: : :: :::::::::: :.. : ::. : NP_001 IPGPPGPPGTAGLPGELGRVGPVGD---PGRRGPPGPPGPPGPRGTIGFHDGDPLCPNAC 360 370 380 390 400 410 180 190 200 210 220 230 pF1KE4 PPGPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPG ::: : ::.::..: : ::: :: :..:.::. : : : :. : : .::::. : NP_001 PPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITG 420 430 440 450 460 470 240 250 260 270 280 290 pF1KE4 PLGPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSG .: :..: :. : :: : :: ::.:.::: : ::::: : : .: ::. ::.: NP_001 IVGDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKG 480 490 500 510 520 530 300 310 320 330 340 350 pF1KE4 EPGMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELG . :.:: ::..:.::. : ::: :. : ::. : .::::.:: :.:: ::.: .: : NP_001 DTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPG 540 550 560 570 580 590 360 370 380 390 400 410 pF1KE4 EAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPG . : :. : ::. : ::: : : .: :. : :: :.::. : :. :: : ::::: NP_001 KPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPG 600 610 620 630 640 650 420 430 440 450 460 470 pF1KE4 PQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRGELGPKG : :: : :::: : ::::.:: .: .: :..:::: :: :::: .:. :: : .: NP_001 PPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRG 660 670 680 690 700 710 480 490 500 510 520 530 pF1KE4 TQGPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGMISEQIA .: : ::.: ::::: :.:: :. :. : : ::. ..:.:...: .:.:..: NP_001 PEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQEHFA 720 730 740 750 760 770 540 550 560 570 580 590 pF1KE4 QLAAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGA---RGPPGYRGPTGELGDPGPR ..:: :..: . :. : :: :::::::::: : :: :: :: .:: : :: ::. NP_001 EMAASLKRPDS-GATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRGPK 780 790 800 810 820 830 600 610 620 630 640 650 pF1KE4 GNQGDRGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGD---PGLPGA :. :..:..: : ::.: : : : :: .. :..: :: :::: ::.:: NP_001 GDLGEKGERGPPGR---GPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGP 840 850 860 870 880 890 660 670 680 pF1KE4 IGAQGTPGICDTSACQGAVLGGVGEKSGSRSS : : ::.:. ..: NP_001 PGPPGLPGFCEPASCTMQAGQRAFNKGPDP 900 910 920 >>XP_016855822 (OMIM: 120260,600204,603932,614284) PREDI (595 aa) initn: 3370 init1: 1317 opt: 2053 Z-score: 755.5 bits: 150.0 E(85289): 2.4e-35 Smith-Waterman score: 2053; 49.7% identity (65.4% similar) in 581 aa overlap (98-670:2-578) 70 80 90 100 110 120 pF1KE4 GKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGPPGEAG : :: .:. : :::::: : :. :::: : XP_016 MGIPGVKGQPGLPGPPGLPGPGFAGPPGPPG 10 20 30 130 140 150 160 170 180 pF1KE4 VSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLP--EGATDLQCPSICPPGPPGP : :: ::.::: : : : ::::::: ::.::.. ::..:. ::. :::: :: XP_016 PVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPPGMKGP 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE4 PGMPGFKGPTGYKG---EQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPLGP ::. : :: .: .: . :. :: : ::: : : :.:: ::.:.:: :: :: XP_016 PGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGP---PGPQGIRGYPGMAGP 100 110 120 130 140 250 260 270 280 290 300 pF1KE4 PGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEPGM :. :: :..: : :: : :..: ::: : : ::: : :: .: :..::.: : XP_016 KGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGATGP 150 160 170 180 190 200 310 320 330 340 350 360 pF1KE4 PGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEAGP :: .:..:.:: :.:: ::. : :: : .:: :.::. :.:: :..:. : : : XP_016 PGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGF 210 220 230 240 250 260 370 380 390 400 410 420 pF1KE4 SGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPGPQGL :: :: :. : :: : : :. : : .:: : :: .: :: :: .: ::.:::::: XP_016 SGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGL 270 280 290 300 310 320 430 440 450 460 470 480 pF1KE4 RGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRGELGPKGTQGP : ::.: : .::.: : : ::::.::: : :: ::::..: ::: : : .: XP_016 PGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGD 330 340 350 360 370 380 490 500 510 520 530 540 pF1KE4 NGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQLAA :. :::: :::::: :: : :::: :. :: :..:..:.: .. :..::.:..:. XP_016 AGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEVAV 390 400 410 420 430 440 550 560 570 580 590 pF1KE4 HLRKPLAPGSIGRPGPAGPPGPPGPPGSIG---HPGARGPPGYRGPTGELGDPGPRGNQG .. : :..: :: ::::::: ::. : ::: :: :: : .:..:. ::.:..: XP_016 SAKRE-ALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRG 450 460 470 480 490 500 600 610 620 630 640 650 pF1KE4 DRGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGDPGLPGAIGAQGTP ..:: : .: : : : : : : :: . .:.:: : :: ::. : :: : : : XP_016 EKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLP 510 520 530 540 550 560 660 670 680 pF1KE4 GICDTSACQGAVLGGVGEKSGSRSS :.:. .:: :: XP_016 GFCEPAACLGASAYASARLTEPGSIKGP 570 580 590 >>XP_011539018 (OMIM: 120260,600204,603932,614284) PREDI (599 aa) initn: 3696 init1: 1485 opt: 2039 Z-score: 750.5 bits: 149.1 E(85289): 4.6e-35 Smith-Waterman score: 2039; 49.4% identity (65.1% similar) in 585 aa overlap (98-670:2-582) 70 80 90 100 110 120 pF1KE4 GKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGPPGEAG : :: .:. : :::::: : :. :::: : XP_011 MGIPGVKGQPGLPGPPGLPGPGFAGPPGPPG 10 20 30 130 140 150 160 170 180 pF1KE4 VSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLP--EGATDL----QCPSICPPG : :: ::.::: : : : ::::::: ::.::.. ::..:. .::. :::: XP_011 PVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLVRDECPTNCPPG 40 50 60 70 80 90 190 200 210 220 230 pF1KE4 PPGPPGMPGFKGPTGYKG---EQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPG ::::. : :: .: .: . :. :: : ::: : : :.:: ::.:.:: :: XP_011 MKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGP---PGPQGIRGYPG 100 110 120 130 140 240 250 260 270 280 290 pF1KE4 PLGPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSG :: :. :: :..: : :: : :..: ::: : : ::: : :: .: :..::.: XP_011 MAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKG 150 160 170 180 190 200 300 310 320 330 340 350 pF1KE4 EPGMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELG : :: .:..:.:: :.:: ::. : :: : .:: :.::. :.:: :..:. : : XP_011 ATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQG 210 220 230 240 250 260 360 370 380 390 400 410 pF1KE4 EAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPG : :: :: :. : :: : : :. : : .:: : :: .: :: :: .: ::.:: XP_011 LPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPG 270 280 290 300 310 320 420 430 440 450 460 470 pF1KE4 PQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRGELGPKG :::: : ::.: : .::.: : : ::::.::: : :: ::::..: ::: : : XP_011 PQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPG 330 340 350 360 370 380 480 490 500 510 520 530 pF1KE4 TQGPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGMISEQIA .: :. :::: :::::: :: : :::: :. :: :..:..:.: .. :..::.: XP_011 PSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLA 390 400 410 420 430 440 540 550 560 570 580 590 pF1KE4 QLAAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIG---HPGARGPPGYRGPTGELGDPGPR ..:. .. : :..: :: ::::::: ::. : ::: :: :: : .:..:. ::. XP_011 EVAVSAKRE-ALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPK 450 460 470 480 490 500 600 610 620 630 640 650 pF1KE4 GNQGDRGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGDPGLPGAIGA :..:..:: : .: : : : : : : :: . .:.:: : :: ::. : :: : XP_011 GKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGP 510 520 530 540 550 560 660 670 680 pF1KE4 QGTPGICDTSACQGAVLGGVGEKSGSRSS : ::.:. .:: :: XP_011 VGLPGFCEPAACLGASAYASARLTEPGSIKGP 570 580 590 684 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:56:23 2016 done: Sat Nov 5 23:56:25 2016 Total Scan time: 12.330 Total Display time: 0.140 Function used was FASTA [36.3.4 Apr, 2011]