FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1382, 113 aa 1>>>pF1KE1382 113 - 113 aa - 113 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.4000+/-0.000551; mu= 15.6691+/- 0.033 mean_var=61.6560+/-12.082, 0's: 0 Z-trim(113.6): 14 B-trim: 0 in 0/51 Lambda= 0.163338 statistics sampled from 14244 (14255) to 14244 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.806), E-opt: 0.2 (0.438), width: 16 Scan time: 1.750 The best scores are: opt bits E(32554) CCDS12482.1 TYROBP gene_id:7305|Hs108|chr19 ( 113) 731 179.3 4.3e-46 CCDS46058.1 TYROBP gene_id:7305|Hs108|chr19 ( 112) 714 175.3 6.9e-45 CCDS54255.1 TYROBP gene_id:7305|Hs108|chr19 ( 102) 538 133.8 2e-32 CCDS59378.1 TYROBP gene_id:7305|Hs108|chr19 ( 101) 521 129.8 3.1e-31 >>CCDS12482.1 TYROBP gene_id:7305|Hs108|chr19 (113 aa) initn: 731 init1: 731 opt: 731 Z-score: 941.0 bits: 179.3 E(32554): 4.3e-46 Smith-Waterman score: 731; 100.0% identity (100.0% similar) in 113 aa overlap (1-113:1-113) 10 20 30 40 50 60 pF1KE1 MGGLEPCSRLLLLPLLLAVSGLRPVQAQAQSDCSCSTVSPGVLAGIVMGDLVLTVLIALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MGGLEPCSRLLLLPLLLAVSGLRPVQAQAQSDCSCSTVSPGVLAGIVMGDLVLTVLIALA 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 VYFLGRLVPRGRGAAEAATRKQRITETESPYQELQGQRSDVYSDLNTQRPYYK ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 VYFLGRLVPRGRGAAEAATRKQRITETESPYQELQGQRSDVYSDLNTQRPYYK 70 80 90 100 110 >>CCDS46058.1 TYROBP gene_id:7305|Hs108|chr19 (112 aa) initn: 533 init1: 500 opt: 714 Z-score: 919.4 bits: 175.3 E(32554): 6.9e-45 Smith-Waterman score: 714; 99.1% identity (99.1% similar) in 113 aa overlap (1-113:1-112) 10 20 30 40 50 60 pF1KE1 MGGLEPCSRLLLLPLLLAVSGLRPVQAQAQSDCSCSTVSPGVLAGIVMGDLVLTVLIALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MGGLEPCSRLLLLPLLLAVSGLRPVQAQAQSDCSCSTVSPGVLAGIVMGDLVLTVLIALA 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 VYFLGRLVPRGRGAAEAATRKQRITETESPYQELQGQRSDVYSDLNTQRPYYK ::::::::::::::::: ::::::::::::::::::::::::::::::::::: CCDS46 VYFLGRLVPRGRGAAEA-TRKQRITETESPYQELQGQRSDVYSDLNTQRPYYK 70 80 90 100 110 >>CCDS54255.1 TYROBP gene_id:7305|Hs108|chr19 (102 aa) initn: 538 init1: 538 opt: 538 Z-score: 695.7 bits: 133.8 E(32554): 2e-32 Smith-Waterman score: 628; 90.3% identity (90.3% similar) in 113 aa overlap (1-113:1-102) 10 20 30 40 50 60 pF1KE1 MGGLEPCSRLLLLPLLLAVSGLRPVQAQAQSDCSCSTVSPGVLAGIVMGDLVLTVLIALA :::::::::::::::::::: ::::::::::::::::::::::::::::: CCDS54 MGGLEPCSRLLLLPLLLAVS-----------DCSCSTVSPGVLAGIVMGDLVLTVLIALA 10 20 30 40 70 80 90 100 110 pF1KE1 VYFLGRLVPRGRGAAEAATRKQRITETESPYQELQGQRSDVYSDLNTQRPYYK ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 VYFLGRLVPRGRGAAEAATRKQRITETESPYQELQGQRSDVYSDLNTQRPYYK 50 60 70 80 90 100 >>CCDS59378.1 TYROBP gene_id:7305|Hs108|chr19 (101 aa) initn: 430 init1: 305 opt: 521 Z-score: 674.1 bits: 129.8 E(32554): 3.1e-31 Smith-Waterman score: 611; 89.4% identity (89.4% similar) in 113 aa overlap (1-113:1-101) 10 20 30 40 50 60 pF1KE1 MGGLEPCSRLLLLPLLLAVSGLRPVQAQAQSDCSCSTVSPGVLAGIVMGDLVLTVLIALA :::::::::::::::::::: ::::::::::::::::::::::::::::: CCDS59 MGGLEPCSRLLLLPLLLAVS-----------DCSCSTVSPGVLAGIVMGDLVLTVLIALA 10 20 30 40 70 80 90 100 110 pF1KE1 VYFLGRLVPRGRGAAEAATRKQRITETESPYQELQGQRSDVYSDLNTQRPYYK ::::::::::::::::: ::::::::::::::::::::::::::::::::::: CCDS59 VYFLGRLVPRGRGAAEA-TRKQRITETESPYQELQGQRSDVYSDLNTQRPYYK 50 60 70 80 90 100 113 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:52:21 2016 done: Mon Nov 7 01:52:21 2016 Total Scan time: 1.750 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]