FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1538, 117 aa 1>>>pF1KE1538 117 - 117 aa - 117 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9634+/-0.000617; mu= 14.0262+/- 0.037 mean_var=83.5988+/-16.077, 0's: 0 Z-trim(113.7): 23 B-trim: 3 in 1/53 Lambda= 0.140273 statistics sampled from 14278 (14300) to 14278 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.805), E-opt: 0.2 (0.439), width: 16 Scan time: 1.470 The best scores are: opt bits E(32554) CCDS13344.1 PI3 gene_id:5266|Hs108|chr20 ( 117) 813 172.7 4.7e-44 >>CCDS13344.1 PI3 gene_id:5266|Hs108|chr20 (117 aa) initn: 813 init1: 813 opt: 813 Z-score: 904.4 bits: 172.7 E(32554): 4.7e-44 Smith-Waterman score: 813; 100.0% identity (100.0% similar) in 117 aa overlap (1-117:1-117) 10 20 30 40 50 60 pF1KE1 MRASSFLIVVVFLIAGTLVLEAAVTGVPVKGQDTVKGRVPFNGQDPVKGQVSVKGQDKVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MRASSFLIVVVFLIAGTLVLEAAVTGVPVKGQDTVKGRVPFNGQDPVKGQVSVKGQDKVK 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 AQEPVKGPVSTKPGSCPIILIRCAMLNPPNRCLKDTDCPGIKKCCEGSCGMACFVPQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 AQEPVKGPVSTKPGSCPIILIRCAMLNPPNRCLKDTDCPGIKKCCEGSCGMACFVPQ 70 80 90 100 110 117 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:52:51 2016 done: Mon Nov 7 01:52:52 2016 Total Scan time: 1.470 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]