FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1539, 313 aa 1>>>pF1KE1539 313 - 313 aa - 313 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2706+/-0.000304; mu= 17.0620+/- 0.019 mean_var=75.3080+/-15.139, 0's: 0 Z-trim(117.3): 11 B-trim: 0 in 0/55 Lambda= 0.147793 statistics sampled from 29120 (29131) to 29120 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.703), E-opt: 0.2 (0.342), width: 16 Scan time: 8.220 The best scores are: opt bits E(85289) NP_055288 (OMIM: 612499) probable dimethyladenosin ( 313) 2067 449.6 3.8e-126 XP_011541625 (OMIM: 612499) PREDICTED: probable di ( 160) 1066 235.9 4e-62 XP_005267063 (OMIM: 607033) PREDICTED: dimethylade ( 251) 186 48.5 1.7e-05 XP_016866406 (OMIM: 607033) PREDICTED: dimethylade ( 251) 186 48.5 1.7e-05 XP_011534175 (OMIM: 607033) PREDICTED: dimethylade ( 251) 186 48.5 1.7e-05 NP_057104 (OMIM: 607033) dimethyladenosine transfe ( 346) 186 48.6 2.2e-05 XP_011534172 (OMIM: 607033) PREDICTED: dimethylade ( 267) 167 44.4 0.0003 XP_011534174 (OMIM: 607033) PREDICTED: dimethylade ( 267) 167 44.4 0.0003 XP_011534173 (OMIM: 607033) PREDICTED: dimethylade ( 267) 167 44.4 0.0003 >>NP_055288 (OMIM: 612499) probable dimethyladenosine tr (313 aa) initn: 2067 init1: 2067 opt: 2067 Z-score: 2385.7 bits: 449.6 E(85289): 3.8e-126 Smith-Waterman score: 2067; 100.0% identity (100.0% similar) in 313 aa overlap (1-313:1-313) 10 20 30 40 50 60 pF1KE1 MPKVKSGAIGRRRGRQEQRRELKSAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_055 MPKVKSGAIGRRRGRQEQRRELKSAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_055 LEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_055 FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_055 LLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 AFKSSAVQQLLEKNYRIHCSVHNIIIPEDFSIADKIQQILTSTGFSDKRARSMDIDDFIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_055 AFKSSAVQQLLEKNYRIHCSVHNIIIPEDFSIADKIQQILTSTGFSDKRARSMDIDDFIR 250 260 270 280 290 300 310 pF1KE1 LLHGFNAEGIHFS ::::::::::::: NP_055 LLHGFNAEGIHFS 310 >>XP_011541625 (OMIM: 612499) PREDICTED: probable dimeth (160 aa) initn: 1066 init1: 1066 opt: 1066 Z-score: 1236.3 bits: 235.9 E(85289): 4e-62 Smith-Waterman score: 1066; 100.0% identity (100.0% similar) in 160 aa overlap (154-313:1-160) 130 140 150 160 170 180 pF1KE1 TCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLA :::::::::::::::::::::::::::::: XP_011 MFQREFALRLVAKPGDKLYCRLSINTQLLA 10 20 30 190 200 210 220 230 240 pF1KE1 RVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 40 50 60 70 80 90 250 260 270 280 290 300 pF1KE1 SSAVQQLLEKNYRIHCSVHNIIIPEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRLLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SSAVQQLLEKNYRIHCSVHNIIIPEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRLLH 100 110 120 130 140 150 310 pF1KE1 GFNAEGIHFS :::::::::: XP_011 GFNAEGIHFS 160 >>XP_005267063 (OMIM: 607033) PREDICTED: dimethyladenosi (251 aa) initn: 166 init1: 141 opt: 186 Z-score: 219.5 bits: 48.5 E(85289): 1.7e-05 Smith-Waterman score: 189; 33.3% identity (58.9% similar) in 129 aa overlap (98-215:13-141) 70 80 90 100 110 120 pF1KE1 GNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT---DLPFFDT :.: .. :.. .. :: : : XP_005 MLSDAAPGKLRIVHGDVLTFKVEKAFSESLKRPWEDDPPNVH 10 20 30 40 130 140 150 160 170 pF1KE1 CVANLPYQISSPFVFKLLLH---R--PFF--RCAI-LMFQREFALRLVAKPGDKLYCRLS ..:::...:.:...: : . : :: : . : ::.: : ::.:. :.: ::: XP_005 IIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQRSRLS 50 60 70 80 90 100 180 190 200 210 220 230 pF1KE1 INTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNK . .: : : :.. . . : : :.:. .::.. : : XP_005 VMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVFQFRR 110 120 130 140 150 160 240 250 260 270 280 290 pF1KE1 TLSAAFKSSAVQQLLEKNYRIHCSVHNIIIPEDFSIADKIQQILTSTGFSDKRARSMDID XP_005 KYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCDVYRKMCDEDPQL 170 180 190 200 210 220 >>XP_016866406 (OMIM: 607033) PREDICTED: dimethyladenosi (251 aa) initn: 166 init1: 141 opt: 186 Z-score: 219.5 bits: 48.5 E(85289): 1.7e-05 Smith-Waterman score: 189; 33.3% identity (58.9% similar) in 129 aa overlap (98-215:13-141) 70 80 90 100 110 120 pF1KE1 GNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT---DLPFFDT :.: .. :.. .. :: : : XP_016 MLSDAAPGKLRIVHGDVLTFKVEKAFSESLKRPWEDDPPNVH 10 20 30 40 130 140 150 160 170 pF1KE1 CVANLPYQISSPFVFKLLLH---R--PFF--RCAI-LMFQREFALRLVAKPGDKLYCRLS ..:::...:.:...: : . : :: : . : ::.: : ::.:. :.: ::: XP_016 IIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQRSRLS 50 60 70 80 90 100 180 190 200 210 220 230 pF1KE1 INTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNK . .: : : :.. . . : : :.:. .::.. : : XP_016 VMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVFQFRR 110 120 130 140 150 160 240 250 260 270 280 290 pF1KE1 TLSAAFKSSAVQQLLEKNYRIHCSVHNIIIPEDFSIADKIQQILTSTGFSDKRARSMDID XP_016 KYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCDVYRKMCDEDPQL 170 180 190 200 210 220 >>XP_011534175 (OMIM: 607033) PREDICTED: dimethyladenosi (251 aa) initn: 166 init1: 141 opt: 186 Z-score: 219.5 bits: 48.5 E(85289): 1.7e-05 Smith-Waterman score: 189; 33.3% identity (58.9% similar) in 129 aa overlap (98-215:13-141) 70 80 90 100 110 120 pF1KE1 GNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT---DLPFFDT :.: .. :.. .. :: : : XP_011 MLSDAAPGKLRIVHGDVLTFKVEKAFSESLKRPWEDDPPNVH 10 20 30 40 130 140 150 160 170 pF1KE1 CVANLPYQISSPFVFKLLLH---R--PFF--RCAI-LMFQREFALRLVAKPGDKLYCRLS ..:::...:.:...: : . : :: : . : ::.: : ::.:. :.: ::: XP_011 IIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQRSRLS 50 60 70 80 90 100 180 190 200 210 220 230 pF1KE1 INTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNK . .: : : :.. . . : : :.:. .::.. : : XP_011 VMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVFQFRR 110 120 130 140 150 160 240 250 260 270 280 290 pF1KE1 TLSAAFKSSAVQQLLEKNYRIHCSVHNIIIPEDFSIADKIQQILTSTGFSDKRARSMDID XP_011 KYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCDVYRKMCDEDPQL 170 180 190 200 210 220 >>NP_057104 (OMIM: 607033) dimethyladenosine transferase (346 aa) initn: 211 init1: 141 opt: 186 Z-score: 217.5 bits: 48.6 E(85289): 2.2e-05 Smith-Waterman score: 264; 30.0% identity (59.1% similar) in 220 aa overlap (20-215:19-236) 10 20 30 40 50 60 pF1KE1 MPKVKSGAIGRRRGRQEQRRELKSAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVV ::. . :. ..:..: . . ..:. ::. . : NP_057 MAASGKLSTCRLPPLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYV 10 20 30 40 50 70 80 90 100 110 pF1KE1 LEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVL--KT ::::: :..: ..:. . .... : : :.. :. ...: .::... :::: :. NP_057 YEVGPGPGGITRSILNADVAELLVVEKDTRFIPGLQMLSDAAP--GKLRIVHGDVLTFKV 60 70 80 90 100 110 120 130 140 150 pF1KE1 DLPFFDTC-------------VANLPYQISSPFVFKLLLH---R--PFF--RCAI-LMFQ . : .. ..:::...:.:...: : . : :: : . : :: NP_057 EKAFSESLKRPWEDDPPNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQ 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE1 REFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPP .: : ::.:. :.: :::. .: : : :.. . . : : :.:. .::.. : : NP_057 KEVAERLAANTGSKQRSRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPK 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE1 PINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIIIPEDFSIADKI NP_057 IEQPFKLVEKVVQNVFQFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSI 240 250 260 270 280 290 >>XP_011534172 (OMIM: 607033) PREDICTED: dimethyladenosi (267 aa) initn: 167 init1: 97 opt: 167 Z-score: 197.2 bits: 44.4 E(85289): 0.0003 Smith-Waterman score: 245; 28.5% identity (57.9% similar) in 221 aa overlap (20-216:19-237) 10 20 30 40 50 60 pF1KE1 MPKVKSGAIGRRRGRQEQRRELKSAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVV ::. . :. ..:..: . . ..:. ::. . : XP_011 MAASGKLSTCRLPPLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYV 10 20 30 40 50 70 80 90 100 110 pF1KE1 LEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVL--KT ::::: :..: ..:. . .... : : :.. :. ...: .::... :::: :. XP_011 YEVGPGPGGITRSILNADVAELLVVEKDTRFIPGLQMLSDAAP--GKLRIVHGDVLTFKV 60 70 80 90 100 110 120 130 140 150 pF1KE1 DLPFFDTC-------------VANLPYQISSPFVFKLLLH---R--PFF--RCAI-LMFQ . : .. ..:::...:.:...: : . : :: : . : :: XP_011 EKAFSESLKRPWEDDPPNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQ 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE1 REFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPP .: : ::.:. :.: :::. .: : : :.. . . : : :.. . ..: . : XP_011 KEVAERLAANTGSKQRSRLSVMAQYLCNVRHIFTIPGQAFVPKPEIFLHLNCLHPLSGAP 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE1 PINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIIIPEDFSIADKI XP_011 LWGRGDSVDPILQPPLQFCPFLGRNRSWGT 240 250 260 >>XP_011534174 (OMIM: 607033) PREDICTED: dimethyladenosi (267 aa) initn: 167 init1: 97 opt: 167 Z-score: 197.2 bits: 44.4 E(85289): 0.0003 Smith-Waterman score: 245; 28.5% identity (57.9% similar) in 221 aa overlap (20-216:19-237) 10 20 30 40 50 60 pF1KE1 MPKVKSGAIGRRRGRQEQRRELKSAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVV ::. . :. ..:..: . . ..:. ::. . : XP_011 MAASGKLSTCRLPPLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYV 10 20 30 40 50 70 80 90 100 110 pF1KE1 LEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVL--KT ::::: :..: ..:. . .... : : :.. :. ...: .::... :::: :. XP_011 YEVGPGPGGITRSILNADVAELLVVEKDTRFIPGLQMLSDAAP--GKLRIVHGDVLTFKV 60 70 80 90 100 110 120 130 140 150 pF1KE1 DLPFFDTC-------------VANLPYQISSPFVFKLLLH---R--PFF--RCAI-LMFQ . : .. ..:::...:.:...: : . : :: : . : :: XP_011 EKAFSESLKRPWEDDPPNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQ 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE1 REFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPP .: : ::.:. :.: :::. .: : : :.. . . : : :.. . ..: . : XP_011 KEVAERLAANTGSKQRSRLSVMAQYLCNVRHIFTIPGQAFVPKPEIFLHLNCLHPLSGAP 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE1 PINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIIIPEDFSIADKI XP_011 LWGRGDSVDPILQPPLQFCPFLGRNRSWGT 240 250 260 >>XP_011534173 (OMIM: 607033) PREDICTED: dimethyladenosi (267 aa) initn: 167 init1: 97 opt: 167 Z-score: 197.2 bits: 44.4 E(85289): 0.0003 Smith-Waterman score: 245; 28.5% identity (57.9% similar) in 221 aa overlap (20-216:19-237) 10 20 30 40 50 60 pF1KE1 MPKVKSGAIGRRRGRQEQRRELKSAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVV ::. . :. ..:..: . . ..:. ::. . : XP_011 MAASGKLSTCRLPPLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYV 10 20 30 40 50 70 80 90 100 110 pF1KE1 LEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVL--KT ::::: :..: ..:. . .... : : :.. :. ...: .::... :::: :. XP_011 YEVGPGPGGITRSILNADVAELLVVEKDTRFIPGLQMLSDAAP--GKLRIVHGDVLTFKV 60 70 80 90 100 110 120 130 140 150 pF1KE1 DLPFFDTC-------------VANLPYQISSPFVFKLLLH---R--PFF--RCAI-LMFQ . : .. ..:::...:.:...: : . : :: : . : :: XP_011 EKAFSESLKRPWEDDPPNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQ 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE1 REFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPP .: : ::.:. :.: :::. .: : : :.. . . : : :.. . ..: . : XP_011 KEVAERLAANTGSKQRSRLSVMAQYLCNVRHIFTIPGQAFVPKPEIFLHLNCLHPLSGAP 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE1 PINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIIIPEDFSIADKI XP_011 LWGRGDSVDPILQPPLQFCPFLGRNRSWGT 240 250 260 313 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:53:24 2016 done: Mon Nov 7 01:53:25 2016 Total Scan time: 8.220 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]