Result of FASTA (ccds) for
pFN21AE4348
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4348, 364 aa
1>>>pF1KE4348 364 - 364 aa - 364 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5415+/-0.000912; mu= 14.9118+/- 0.055
mean_var=63.8070+/-12.822, 0's: 0 Z-trim(105.2): 14 B-trim: 2 in 1/48
Lambda= 0.160561
statistics sampled from 8300 (8308) to 8300 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.643), E-opt: 0.2 (0.255), width: 16
Scan time: 2.740
The best scores are: opt bits E(32554)
CCDS10668.1 ALDOA gene_id:226|Hs108|chr16 ( 364) 2399 564.5 5e-161
CCDS58450.1 ALDOA gene_id:226|Hs108|chr16 ( 418) 2399 564.5 5.7e-161
CCDS11236.1 ALDOC gene_id:230|Hs108|chr17 ( 364) 1996 471.1 6.4e-133
CCDS6756.1 ALDOB gene_id:229|Hs108|chr9 ( 364) 1711 405.1 4.8e-113
>>CCDS10668.1 ALDOA gene_id:226|Hs108|chr16 (364 aa)
initn: 2399 init1: 2399 opt: 2399 Z-score: 3004.4 bits: 564.5 E(32554): 5e-161
Smith-Waterman score: 2399; 100.0% identity (100.0% similar) in 364 aa overlap (1-364:1-364)
10 20 30 40 50 60
pF1KE4 MPYQYPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MPYQYPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 QLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 GETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 NGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 NGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHAC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 TQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVS
310 320 330 340 350 360
pF1KE4 NHAY
::::
CCDS10 NHAY
>>CCDS58450.1 ALDOA gene_id:226|Hs108|chr16 (418 aa)
initn: 2399 init1: 2399 opt: 2399 Z-score: 3003.4 bits: 564.5 E(32554): 5.7e-161
Smith-Waterman score: 2399; 100.0% identity (100.0% similar) in 364 aa overlap (1-364:55-418)
10 20 30
pF1KE4 MPYQYPALTPEQKKELSDIAHRIVAPGKGI
::::::::::::::::::::::::::::::
CCDS58 PPVASGQLHPQLGNTQHQTELGKELATTSTMPYQYPALTPEQKKELSDIAHRIVAPGKGI
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE4 LAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADD
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE4 GRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRC
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE4 VLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVL
210 220 230 240 250 260
220 230 240 250 260 270
pF1KE4 AAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITF
270 280 290 300 310 320
280 290 300 310 320 330
pF1KE4 LSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVK
330 340 350 360 370 380
340 350 360
pF1KE4 RALANSLACQGKYTPSGQAGAAASESLFVSNHAY
::::::::::::::::::::::::::::::::::
CCDS58 RALANSLACQGKYTPSGQAGAAASESLFVSNHAY
390 400 410
>>CCDS11236.1 ALDOC gene_id:230|Hs108|chr17 (364 aa)
initn: 1996 init1: 1996 opt: 1996 Z-score: 2499.8 bits: 471.1 E(32554): 6.4e-133
Smith-Waterman score: 1996; 81.9% identity (94.2% similar) in 364 aa overlap (1-364:1-364)
10 20 30 40 50 60
pF1KE4 MPYQYPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYR
::..::::. :::::::::: :::::::::::::::.::.::::..::.::::::::.::
CCDS11 MPHSYPALSAEQKKELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 QLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTN
:.:..:::::. ::::::.:::::::: :.: :: ..:..:: ::::::::::::::::.
CCDS11 QVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGIVVGIKVDKGVVPLAGTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 GETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQ
::::::::::::::::::::::::::::::::::.:.:::::::.:::::::::::::::
CCDS11 GETTTQGLDGLSERCAQYKKDGADFAKWRCVLKISERTPSALAILENANVLARYASICQQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 NGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHAC
:::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::
CCDS11 NGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHAC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 TQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTF
:.. ::::::::::::::::::: :.:::::::::::::.::::::.::: .::::::
CCDS11 PIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVS
:::::::::::.:: :...: :: ::..::: .:.:: :::: ::. :.::..::...
CCDS11 SYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIA
310 320 330 340 350 360
pF1KE4 NHAY
::::
CCDS11 NHAY
>>CCDS6756.1 ALDOB gene_id:229|Hs108|chr9 (364 aa)
initn: 1728 init1: 1698 opt: 1711 Z-score: 2143.1 bits: 405.1 E(32554): 4.8e-113
Smith-Waterman score: 1711; 69.5% identity (89.6% similar) in 364 aa overlap (1-364:1-364)
10 20 30 40 50 60
pF1KE4 MPYQYPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYR
: ...:::: :::::::.::. ::: ::::::::::.:....::: : .:::::::: .:
CCDS67 MAHRFPALTQEQKKELSEIAQSIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 QLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTN
..:...:. .: :::::::::::::: ..:. : ...: :: :::::.:.: .::::::
CCDS67 EILFSVDSSINQSIGGVILFHETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 GETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQ
::: :::::::::::::::::.::.::: ::.:... ::.:::.::::.::::::::::
CCDS67 KETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRIADQCPSSLAIQENANALARYASICQQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 NGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHAC
::.:::::::..:::::::..::::::::::::::::.:::.::::::::::::: ::::
CCDS67 NGLVPIVEPEVIPDGDHDLEHCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHAC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 TQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTF
:.:.. :..::::::::.:::: :: :: :::::.:::.:..:::::: ::: ::: :.:
CCDS67 TKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVS
::::::::::: ::::: : .:.:: ..:::.:: : .:.:. .:..:::...:::..
CCDS67 SYGRALQASALAAWGGKAANKEATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTA
310 320 330 340 350 360
pF1KE4 NHAY
..:
CCDS67 CYTY
364 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 15:13:00 2016 done: Mon Nov 7 15:13:00 2016
Total Scan time: 2.740 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]