FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5607, 586 aa 1>>>pF1KE5607 586 - 586 aa - 586 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.0923+/-0.00099; mu= 7.6833+/- 0.060 mean_var=170.6998+/-32.878, 0's: 0 Z-trim(110.4): 10 B-trim: 0 in 0/52 Lambda= 0.098165 statistics sampled from 11554 (11558) to 11554 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.695), E-opt: 0.2 (0.355), width: 16 Scan time: 2.830 The best scores are: opt bits E(32554) CCDS4352.1 SLU7 gene_id:10569|Hs108|chr5 ( 586) 3970 574.6 1.2e-163 >>CCDS4352.1 SLU7 gene_id:10569|Hs108|chr5 (586 aa) initn: 3970 init1: 3970 opt: 3970 Z-score: 3051.3 bits: 574.6 E(32554): 1.2e-163 Smith-Waterman score: 3970; 99.7% identity (99.8% similar) in 586 aa overlap (1-586:1-586) 10 20 30 40 50 60 pF1KE5 MSATVVDAVNAAPLSGSKEMSLEEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MSATVVDAVNAAPLSGSKEMSLEEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDIN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSVITKYRKGAC ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: CCDS43 PHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSIITKYRKGAC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 ENCGAMTHKKKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ENCGAMTHKKKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 IVEEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQTEKDHNSEDEDE :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: CCDS43 IVEEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQMEKDHNSEDEDE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 DKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 GKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 GKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 KEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVACSKYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVACSKYE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 EDVKIHNHTHIWGSYWKEGRWGYKCCHSFFKYSYCTGEAGKEIVNSEECIINEITGEESV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EDVKIHNHTHIWGSYWKEGRWGYKCCHSFFKYSYCTGEAGKEIVNSEECIINEITGEESV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 KKPQTLMELHQEKLKEEKKKKKKKKKKHRKSSSDSDDEEKKHEKLKKALNAEEARLLHVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KKPQTLMELHQEKLKEEKKKKKKKKKKHRKSSSDSDDEEKKHEKLKKALNAEEARLLHVK 490 500 510 520 530 540 550 560 570 580 pF1KE5 ETMQIDERKRPYNSMYETREPTEEEMEAYRMKRQRPDDPMASFLGQ :::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ETMQIDERKRPYNSMYETREPTEEEMEAYRMKRQRPDDPMASFLGQ 550 560 570 580 586 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:05:45 2016 done: Tue Nov 8 05:05:45 2016 Total Scan time: 2.830 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]