FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1461, 492 aa 1>>>pF1KE1461 492 - 492 aa - 492 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.6668+/-0.000785; mu= 8.4184+/- 0.047 mean_var=144.6469+/-29.601, 0's: 0 Z-trim(114.5): 23 B-trim: 524 in 2/49 Lambda= 0.106640 statistics sampled from 15042 (15063) to 15042 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.463), width: 16 Scan time: 3.570 The best scores are: opt bits E(32554) CCDS4860.1 FRS3 gene_id:10817|Hs108|chr6 ( 492) 3505 550.5 1.6e-156 CCDS41809.1 FRS2 gene_id:10818|Hs108|chr12 ( 508) 880 146.6 5.9e-35 >>CCDS4860.1 FRS3 gene_id:10817|Hs108|chr6 (492 aa) initn: 3505 init1: 3505 opt: 3505 Z-score: 2923.8 bits: 550.5 E(32554): 1.6e-156 Smith-Waterman score: 3505; 100.0% identity (100.0% similar) in 492 aa overlap (1-492:1-492) 10 20 30 40 50 60 pF1KE1 MGSCCSCLNRDSVPDNHPTKFKVTNVDDEGVELGSGVMELTQSELVLHLHRREAVRWPYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 MGSCCSCLNRDSVPDNHPTKFKVTNVDDEGVELGSGVMELTQSELVLHLHRREAVRWPYL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEPVIIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEPVIIT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RNSHPAELDLPRAPQPPNALGYTVSSFSNGCPGEGPRFSAPRRLSTSSLRHPSLGEESTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 RNSHPAELDLPRAPQPPNALGYTVSSFSNGCPGEGPRFSAPRRLSTSSLRHPSLGEESTH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 ALIAPDEQSHTYVNTPASEDDHRRGRHCLQPLPEGQAPFLPQARGPDQRDPQVFLQPGQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 ALIAPDEQSHTYVNTPASEDDHRRGRHCLQPLPEGQAPFLPQARGPDQRDPQVFLQPGQV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 KFVLGPTPARRHMVKCQGLCPSLHDPPHHNNNNEAPSECPAQPKCTYENVTGGLWRGAGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 KFVLGPTPARRHMVKCQGLCPSLHDPPHHNNNNEAPSECPAQPKCTYENVTGGLWRGAGW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 RLSPEEPGWNGLAHRRAALLHYENLPPLPPVWESQAQQLGGEAGDDGDSRDGLTPSSNGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 RLSPEEPGWNGLAHRRAALLHYENLPPLPPVWESQAQQLGGEAGDDGDSRDGLTPSSNGF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 PDGEEDETPLQKPTSTRAAIRSHGSFPVPLTRRRGSPRVFNFDFRRPGPEPPRQLNYIQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 PDGEEDETPLQKPTSTRAAIRSHGSFPVPLTRRRGSPRVFNFDFRRPGPEPPRQLNYIQV 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 ELKGWGGDRPKGPQNPSSPQAPMPTTHPARSSDSYAVIDLKKTVAMSNLQRALPRDDGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 ELKGWGGDRPKGPQNPSSPQAPMPTTHPARSSDSYAVIDLKKTVAMSNLQRALPRDDGTA 430 440 450 460 470 480 490 pF1KE1 RKTRHNSTDLPL :::::::::::: CCDS48 RKTRHNSTDLPL 490 >>CCDS41809.1 FRS2 gene_id:10818|Hs108|chr12 (508 aa) initn: 1402 init1: 663 opt: 880 Z-score: 741.0 bits: 146.6 E(32554): 5.9e-35 Smith-Waterman score: 1524; 48.6% identity (73.4% similar) in 523 aa overlap (1-492:1-508) 10 20 30 40 50 60 pF1KE1 MGSCCSCLNRDSVPDNHPTKFKVTNVDDEGVELGSGVMELTQSELVLHLHRREAVRWPYL ::::::: ..:.::::: .:::: ::::.: :::::.::::..::.:. ..:..:.: :: CCDS41 MGSCCSCPDKDTVPDNHRNKFKVINVDDDGNELGSGIMELTDTELILYTRKRDSVKWHYL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEPVIIT :::::::::::::::::::::::::::::::.::::.::.::..:: :::::.::::. CCDS41 CLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEPVV-E 70 80 90 100 110 130 140 150 160 170 pF1KE1 RNSHPAELDLPRAPQPPNALGYTVSSFSNGCP-----GEGPRFSAPRRLSTSSLRHPSLG ::.: .::..::.:. :.. :...... :: : :.. . :. :..: : ::.: CCDS41 RNNHQTELEVPRTPRTPTTPGFAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVG 120 130 140 150 160 170 180 190 200 210 220 pF1KE1 EESTHALIAPDEQSHTYVNTPASEDDHRRGRHCLQ-PLP------EGQAPFLPQARGPDQ ::::: :.. .:: :::::: . ... :..: .. :: :...: . . .. CCDS41 EESTHPLLVAEEQVHTYVNTTGVQEE-RKNRTSVHVPLEARVSNAESSTP-KEEPSSIED 180 190 200 210 220 230 230 240 250 260 270 pF1KE1 RDPQVFLQPGQVKFVLGPTPARRHMVKCQGLCPSLHDPPHHN--NNNEAPS--------E ::::..:.: :::::::::....... . : .: . ::.: . . CCDS41 RDPQILLEPEGVKFVLGPTPVQKQLMEKEKLEQLGRDQVSGSGANNTEWDTGYDSDERRD 240 250 260 270 280 290 280 290 300 310 320 330 pF1KE1 CPAQPKCTYENVTG-------GLWRGAGWRLSPEEP-GWNGLAHRRAALLHYENLPPLPP :. : .:::..: :. :: : . . :. :.::.:::.::::: ::: CCDS41 APSVNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQRRTALLNYENLPSLPP 300 310 320 330 340 350 340 350 360 370 380 390 pF1KE1 VWESQAQQLGGEAGDDGDSRDGLTPSSNGFPDGEEDETPLQKPTSTRAAIRSHGSFPVPL ::: :..: . :. :. ::: ::. .. . :... ..:. . .. . CCDS41 VWE--ARKL---SRDEDDNLGPKTPSLNGYHNNLD---PMHNYVNTENVTVPASAHKIEY 360 370 380 390 400 400 410 420 430 440 pF1KE1 TRRRG-SPRVFNFDFRRPGPEPPRQLNYIQVELKGWGGDRPKGPQNPSSPQAPMPTTHPA .::: .: :::::.:::. : ::::::::.:.: :.: . ::.:..: .:.: : :. CCDS41 SRRRDCTPTVFNFDIRRPSLEH-RQLNYIQVDLEG-GSDSDN-PQTPKTPTTPLPQT-PT 410 420 430 440 450 460 450 460 470 480 490 pF1KE1 RSSDSYAVIDLKKTVAMSNLQRALPRDDGTARKTRHNSTDLPL : .. :::::...:.::::::.::::::::.:::::::::::. CCDS41 RRTELYAVIDIERTAAMSNLQKALPRDDGTSRKTRHNSTDLPM 470 480 490 500 492 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:55:12 2016 done: Mon Nov 7 01:55:13 2016 Total Scan time: 3.570 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]