FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4527, 576 aa 1>>>pF1KE4527 576 - 576 aa - 576 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.3877+/-0.000882; mu= 5.4431+/- 0.053 mean_var=183.8370+/-36.682, 0's: 0 Z-trim(112.6): 8 B-trim: 26 in 1/51 Lambda= 0.094593 statistics sampled from 13325 (13328) to 13325 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.747), E-opt: 0.2 (0.409), width: 16 Scan time: 3.620 The best scores are: opt bits E(32554) CCDS11592.1 COIL gene_id:8161|Hs108|chr17 ( 576) 3787 529.2 5.2e-150 >>CCDS11592.1 COIL gene_id:8161|Hs108|chr17 (576 aa) initn: 3787 init1: 3787 opt: 3787 Z-score: 2806.7 bits: 529.2 E(32554): 5.2e-150 Smith-Waterman score: 3787; 100.0% identity (100.0% similar) in 576 aa overlap (1-576:1-576) 10 20 30 40 50 60 pF1KE4 MAASETVRLRLQFDYPPPATPHCTAFWLLVDLNRCRVVTDLISLIRQRFGFSSGAFLGLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MAASETVRLRLQFDYPPPATPHCTAFWLLVDLNRCRVVTDLISLIRQRFGFSSGAFLGLY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 LEGGLLPPAESARLVRDNDCLRVKLEERGVAENSVVISNGDINLSLRKAKKRAFQLEEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LEGGLLPPAESARLVRDNDCLRVKLEERGVAENSVVISNGDINLSLRKAKKRAFQLEEGE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ETEPDCKYSKKHWKSRENNNNNEKVLDLEPKAVTDQTVSKKNKRKNKATCGTVGDDNEEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ETEPDCKYSKKHWKSRENNNNNEKVLDLEPKAVTDQTVSKKNKRKNKATCGTVGDDNEEA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 KRKSPKKKEKCEYKKKAKNPKSPKVQAVKDWANQRCSSPKGSARNSLVKAKRKGSVSVCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KRKSPKKKEKCEYKKKAKNPKSPKVQAVKDWANQRCSSPKGSARNSLVKAKRKGSVSVCS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 KESPSSSSESESCDESISDGPSKVTLEARNSSEKLPTELSKEEPSTKNTTADKLAIKLGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KESPSSSSESESCDESISDGPSKVTLEARNSSEKLPTELSKEEPSTKNTTADKLAIKLGF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 SLTPSKGKTSGTTSSSSDSSAESDDQCLMSSSTPECAAGFLKTVGLFAGRGRPGPGLSSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SLTPSKGKTSGTTSSSSDSSAESDDQCLMSSSTPECAAGFLKTVGLFAGRGRPGPGLSSQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 TAGAAGWRRSGSNGGGQAPGASPSVSLPASLGRGWGREENLFSWKGAKGRGMRGRGRGRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 TAGAAGWRRSGSNGGGQAPGASPSVSLPASLGRGWGREENLFSWKGAKGRGMRGRGRGRG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 HPVSCVVNRSTDNQRQQQLNDVVKNSSTIIQNPVETPKKDYSLLPLLAAAPQVGEKIAFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 HPVSCVVNRSTDNQRQQQLNDVVKNSSTIIQNPVETPKKDYSLLPLLAAAPQVGEKIAFK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 LLELTSSYSPDVSDYKEGRILSHNPETQQVDIEILSSLPALREPGKFDLVYHNENGAEVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LLELTSSYSPDVSDYKEGRILSHNPETQQVDIEILSSLPALREPGKFDLVYHNENGAEVV 490 500 510 520 530 540 550 560 570 pF1KE4 EYAVTQESKITVFWKELIDPRLIIESPSNTSSTEPA :::::::::::::::::::::::::::::::::::: CCDS11 EYAVTQESKITVFWKELIDPRLIIESPSNTSSTEPA 550 560 570 576 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:13:41 2016 done: Sun Nov 6 00:13:42 2016 Total Scan time: 3.620 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]