FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6303, 347 aa 1>>>pF1KE6303 347 - 347 aa - 347 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0425+/-0.000767; mu= 17.2415+/- 0.046 mean_var=58.4135+/-11.518, 0's: 0 Z-trim(107.6): 9 B-trim: 8 in 1/47 Lambda= 0.167810 statistics sampled from 9664 (9667) to 9664 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.297), width: 16 Scan time: 2.000 The best scores are: opt bits E(32554) CCDS5993.1 TUSC3 gene_id:7991|Hs108|chr8 ( 347) 2342 575.1 2.9e-164 CCDS5994.1 TUSC3 gene_id:7991|Hs108|chr8 ( 348) 2318 569.3 1.6e-162 CCDS14436.2 MAGT1 gene_id:84061|Hs108|chrX ( 367) 1643 405.9 2.6e-113 >>CCDS5993.1 TUSC3 gene_id:7991|Hs108|chr8 (347 aa) initn: 2342 init1: 2342 opt: 2342 Z-score: 3062.6 bits: 575.1 E(32554): 2.9e-164 Smith-Waterman score: 2342; 100.0% identity (100.0% similar) in 347 aa overlap (1-347:1-347) 10 20 30 40 50 60 pF1KE6 MGARGAPSRRRQAGRRLRYLPTGSFPFLLLLLLLCIQLGGGQKKKENLLAEKVEQLMEWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 MGARGAPSRRRQAGRRLRYLPTGSFPFLLLLLLLCIQLGGGQKKKENLLAEKVEQLMEWS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SRRSIFRMNGDKFRKFIKAPPRNYSMIVMFTALQPQRQCSVCRQANEEYQILANSWRYSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 SRRSIFRMNGDKFRKFIKAPPRNYSMIVMFTALQPQRQCSVCRQANEEYQILANSWRYSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 AFCNKLFFSMVDYDEGTDVFQQLNMNSAPTFMHFPPKGRPKRADTFDLQRIGFAAEQLAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 AFCNKLFFSMVDYDEGTDVFQQLNMNSAPTFMHFPPKGRPKRADTFDLQRIGFAAEQLAK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 WIADRTDVHIRVFRPPNYSGTIALALLVSLVGGLLYLRRNNLEFIYNKTGWAMVSLCIVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 WIADRTDVHIRVFRPPNYSGTIALALLVSLVGGLLYLRRNNLEFIYNKTGWAMVSLCIVF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 AMTSGQMWNHIRGPPYAHKNPHNGQVSYIHGSSQAQFVAESHIILVLNAAITMGMVLLNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 AMTSGQMWNHIRGPPYAHKNPHNGQVSYIHGSSQAQFVAESHIILVLNAAITMGMVLLNE 250 260 270 280 290 300 310 320 330 340 pF1KE6 AATSKGDVGKRRIICLVGLGLVVFFFSFLLSIFRSKYHGYPYSFLIK ::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 AATSKGDVGKRRIICLVGLGLVVFFFSFLLSIFRSKYHGYPYSFLIK 310 320 330 340 >>CCDS5994.1 TUSC3 gene_id:7991|Hs108|chr8 (348 aa) initn: 2318 init1: 2318 opt: 2318 Z-score: 3031.2 bits: 569.3 E(32554): 1.6e-162 Smith-Waterman score: 2318; 100.0% identity (100.0% similar) in 343 aa overlap (1-343:1-343) 10 20 30 40 50 60 pF1KE6 MGARGAPSRRRQAGRRLRYLPTGSFPFLLLLLLLCIQLGGGQKKKENLLAEKVEQLMEWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 MGARGAPSRRRQAGRRLRYLPTGSFPFLLLLLLLCIQLGGGQKKKENLLAEKVEQLMEWS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SRRSIFRMNGDKFRKFIKAPPRNYSMIVMFTALQPQRQCSVCRQANEEYQILANSWRYSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 SRRSIFRMNGDKFRKFIKAPPRNYSMIVMFTALQPQRQCSVCRQANEEYQILANSWRYSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 AFCNKLFFSMVDYDEGTDVFQQLNMNSAPTFMHFPPKGRPKRADTFDLQRIGFAAEQLAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 AFCNKLFFSMVDYDEGTDVFQQLNMNSAPTFMHFPPKGRPKRADTFDLQRIGFAAEQLAK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 WIADRTDVHIRVFRPPNYSGTIALALLVSLVGGLLYLRRNNLEFIYNKTGWAMVSLCIVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 WIADRTDVHIRVFRPPNYSGTIALALLVSLVGGLLYLRRNNLEFIYNKTGWAMVSLCIVF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 AMTSGQMWNHIRGPPYAHKNPHNGQVSYIHGSSQAQFVAESHIILVLNAAITMGMVLLNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 AMTSGQMWNHIRGPPYAHKNPHNGQVSYIHGSSQAQFVAESHIILVLNAAITMGMVLLNE 250 260 270 280 290 300 310 320 330 340 pF1KE6 AATSKGDVGKRRIICLVGLGLVVFFFSFLLSIFRSKYHGYPYSFLIK ::::::::::::::::::::::::::::::::::::::::::: CCDS59 AATSKGDVGKRRIICLVGLGLVVFFFSFLLSIFRSKYHGYPYSDLDFE 310 320 330 340 >>CCDS14436.2 MAGT1 gene_id:84061|Hs108|chrX (367 aa) initn: 1633 init1: 1633 opt: 1643 Z-score: 2147.7 bits: 405.9 E(32554): 2.6e-113 Smith-Waterman score: 1643; 69.1% identity (93.8% similar) in 324 aa overlap (24-346:43-366) 10 20 30 40 50 pF1KE6 MGARGAPSRRRQAGRRLRYLPTGSFPFLLLLLLLC-IQLGGGQKKKENLLAEK : ... ::..: . ...:.::: .:.:: CCDS14 RPTLRPSRSKVSLIEGRGANMAARWRFWCVSVTMVVALLIVCDVPSASAQRKKEMVLSEK 20 30 40 50 60 70 60 70 80 90 100 110 pF1KE6 VEQLMEWSSRRSIFRMNGDKFRKFIKAPPRNYSMIVMFTALQPQRQCSVCRQANEEYQIL : :::::...: ..::::::::...::::::::.:::::::: .::: ::.::.::.::: CCDS14 VSQLMEWTNKRPVIRMNGDKFRRLVKAPPRNYSVIVMFTALQLHRQCVVCKQADEEFQIL 80 90 100 110 120 130 120 130 140 150 160 170 pF1KE6 ANSWRYSSAFCNKLFFSMVDYDEGTDVFQQLNMNSAPTFMHFPPKGRPKRADTFDLQRIG :::::::::: :..::.:::.:::.::::.:::::::::..:: ::.:::.::..:: : CCDS14 ANSWRYSSAFTNRIFFAMVDFDEGSDVFQMLNMNSAPTFINFPAKGKPKRGDTYELQVRG 140 150 160 170 180 190 180 190 200 210 220 230 pF1KE6 FAAEQLAKWIADRTDVHIRVFRPPNYSGTIALALLVSLVGGLLYLRRNNLEFIYNKTGWA :.:::.:.::::::::.:::.:::::.: . :.::....:::.::::.:.::..:::::: CCDS14 FSAEQIARWIADRTDVNIRVIRPPNYAGPLMLGLLLAVIGGLVYLRRSNMEFLFNKTGWA 200 210 220 230 240 250 240 250 260 270 280 290 pF1KE6 MVSLCIVFAMTSGQMWNHIRGPPYAHKNPHNGQVSYIHGSSQAQFVAESHIILVLNAAIT ...::.:.::::::::::::::::::::::.:.:.:::::::::::::.::.:..:...: CCDS14 FAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGHVNYIHGSSQAQFVAETHIVLLFNGGVT 260 270 280 290 300 310 300 310 320 330 340 pF1KE6 MGMVLLNEAATSKGDVGKRRIICLVGLGLVVFFFSFLLSIFRSKYHGYPYSFLIK .::::: ::::: :.:::.:.:..:.::::.:::..::::::::::::::::. CCDS14 LGMVLLCEAATSDMDIGKRKIMCVAGIGLVVLFFSWMLSIFRSKYHGYPYSFLMS 320 330 340 350 360 347 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:54:38 2016 done: Tue Nov 8 11:54:38 2016 Total Scan time: 2.000 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]