FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0897, 255 aa 1>>>pF1KE0897 255 - 255 aa - 255 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0281+/-0.00103; mu= 6.6545+/- 0.062 mean_var=107.6060+/-20.823, 0's: 0 Z-trim(106.5): 40 B-trim: 8 in 1/51 Lambda= 0.123639 statistics sampled from 9013 (9044) to 9013 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.649), E-opt: 0.2 (0.278), width: 16 Scan time: 1.850 The best scores are: opt bits E(32554) CCDS1341.1 STX6 gene_id:10228|Hs108|chr1 ( 255) 1622 299.9 1.1e-81 CCDS32922.1 STX10 gene_id:8677|Hs108|chr19 ( 249) 1000 188.9 2.8e-48 CCDS65738.1 STX6 gene_id:10228|Hs108|chr1 ( 154) 970 183.5 7.6e-47 CCDS62569.1 STX10 gene_id:8677|Hs108|chr19 ( 246) 879 167.3 8.7e-42 CCDS62570.1 STX10 gene_id:8677|Hs108|chr19 ( 220) 744 143.2 1.4e-34 CCDS62571.1 STX10 gene_id:8677|Hs108|chr19 ( 200) 477 95.6 2.8e-20 >>CCDS1341.1 STX6 gene_id:10228|Hs108|chr1 (255 aa) initn: 1622 init1: 1622 opt: 1622 Z-score: 1579.7 bits: 299.9 E(32554): 1.1e-81 Smith-Waterman score: 1622; 100.0% identity (100.0% similar) in 255 aa overlap (1-255:1-255) 10 20 30 40 50 60 pF1KE0 MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 LEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 QALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 GVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAI 190 200 210 220 230 240 250 pF1KE0 LFAVLLVVLILFLVL ::::::::::::::: CCDS13 LFAVLLVVLILFLVL 250 >>CCDS32922.1 STX10 gene_id:8677|Hs108|chr19 (249 aa) initn: 1042 init1: 551 opt: 1000 Z-score: 980.2 bits: 188.9 E(32554): 2.8e-48 Smith-Waterman score: 1000; 61.2% identity (84.7% similar) in 255 aa overlap (1-255:1-249) 10 20 30 40 50 60 pF1KE0 MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWD ::.:::::::.::::::::::.::.::: ::::. ... :::.:::::::::.::::::: CCDS32 MSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 LEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNR ::::.:::.:::::: ::.: : .:. ::.:. :..:..:::.: . .. :. ::.:: CCDS32 LEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 QALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSI . : : ..:. . .: :: :.:..:::::: ::::...::.:::.::::: CCDS32 EILAGKPAAQK---SPSDL---LDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSI 130 140 150 160 170 190 200 210 220 230 240 pF1KE0 GVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAI :::.:: :.: ::.::..::. :..:.. ::::.:.:..:::::::::::::::::::. CCDS32 QVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAKVSHMTSDRRQWCAIAV 180 190 200 210 220 230 250 pF1KE0 LFAVLLVVLILFLVL : .:::.::::.. : CCDS32 LVGVLLLVLILLFSL 240 >>CCDS65738.1 STX6 gene_id:10228|Hs108|chr1 (154 aa) initn: 970 init1: 970 opt: 970 Z-score: 954.5 bits: 183.5 E(32554): 7.6e-47 Smith-Waterman score: 970; 100.0% identity (100.0% similar) in 154 aa overlap (102-255:1-154) 80 90 100 110 120 130 pF1KE0 EANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNRQALLGDSGSQN :::::::::::::::::::::::::::::: CCDS65 MKDQMSTSSVQALAERKNRQALLGDSGSQN 10 20 30 140 150 160 170 180 190 pF1KE0 WSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 WSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIG 40 50 60 70 80 90 200 210 220 230 240 250 pF1KE0 GELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAILFAVLLVVLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 GELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAILFAVLLVVLIL 100 110 120 130 140 150 pF1KE0 FLVL :::: CCDS65 FLVL >>CCDS62569.1 STX10 gene_id:8677|Hs108|chr19 (246 aa) initn: 891 init1: 549 opt: 879 Z-score: 863.6 bits: 167.3 E(32554): 8.7e-42 Smith-Waterman score: 879; 60.0% identity (83.9% similar) in 230 aa overlap (1-230:1-224) 10 20 30 40 50 60 pF1KE0 MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWD ::.:::::::.::::::::::.::.::: ::::. ... :::.:::::::::.::::::: CCDS62 MSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 LEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNR ::::.:::.:::::: ::.: : .:. ::.:. :..:..:::.: . .. :. ::.:: CCDS62 LEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 QALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSI . : : ..:. . .: :: :.:..:::::: ::::...::.:::.::::: CCDS62 EILAGKPAAQK---SPSDL---LDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSI 130 140 150 160 170 190 200 210 220 230 240 pF1KE0 GVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAI :::.:: :.: ::.::..::. :..:.. ::::.:.:..:::::::::: CCDS62 QVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAKVSHMTSGESPQGRGQS 180 190 200 210 220 230 250 pF1KE0 LFAVLLVVLILFLVL CCDS62 WWGQVVGGTLSP 240 >>CCDS62570.1 STX10 gene_id:8677|Hs108|chr19 (220 aa) initn: 756 init1: 549 opt: 744 Z-score: 734.3 bits: 143.2 E(32554): 1.4e-34 Smith-Waterman score: 744; 59.2% identity (81.6% similar) in 201 aa overlap (1-201:1-195) 10 20 30 40 50 60 pF1KE0 MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWD ::.:::::::.::::::::::.::.::: ::::. ... :::.:::::::::.::::::: CCDS62 MSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 LEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNR ::::.:::.:::::: ::.: : .:. ::.:. :..:..:::.: . .. :. ::.:: CCDS62 LEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTAVAFLERNNR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 QALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSI . : : ..:. . .: :: :.:..:::::: ::::...::.:::.::::: CCDS62 EILAGKPAAQK---SPSDL---LDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSI 130 140 150 160 170 190 200 210 220 230 240 pF1KE0 GVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAI :::.:: :.: ::.::: . CCDS62 QVLKHMSGRVGEELDEQACWMPSPKRWTTPSPAWTGSSGSWPKYPT 180 190 200 210 220 >>CCDS62571.1 STX10 gene_id:8677|Hs108|chr19 (200 aa) initn: 907 init1: 477 opt: 477 Z-score: 477.5 bits: 95.6 E(32554): 2.8e-20 Smith-Waterman score: 775; 53.3% identity (72.5% similar) in 255 aa overlap (1-255:1-200) 10 20 30 40 50 60 pF1KE0 MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWD ::.:::::::.::::::::::.::.::: ::::. ... :::.:::::::::.::::::: CCDS62 MSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 LEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNR ::::.:::.:::::: : :.. .. .: ...:.:.: CCDS62 LEDLEETIGIVEANPGK---PAAQ---------------KSPSDLLDASAVSA------- 70 80 90 130 140 150 160 170 180 pF1KE0 QALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSI .:..:::::: ::::...::.:::.::::: CCDS62 ------------------------------TSRYIEEQQATQQLIMDEQDQQLEMVSGSI 100 110 120 190 200 210 220 230 240 pF1KE0 GVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAI :::.:: :.: ::.::..::. :..:.. ::::.:.:..:::::::::::::::::::. CCDS62 QVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAKVSHMTSDRRQWCAIAV 130 140 150 160 170 180 250 pF1KE0 LFAVLLVVLILFLVL : .:::.::::.. : CCDS62 LVGVLLLVLILLFSL 190 200 255 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:00:18 2016 done: Mon Nov 7 02:00:19 2016 Total Scan time: 1.850 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]