FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1522, 592 aa 1>>>pF1KE1522 592 - 592 aa - 592 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6894+/-0.00113; mu= 16.7548+/- 0.067 mean_var=64.0506+/-12.416, 0's: 0 Z-trim(101.5): 22 B-trim: 2 in 1/47 Lambda= 0.160255 statistics sampled from 6555 (6556) to 6555 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.552), E-opt: 0.2 (0.201), width: 16 Scan time: 3.240 The best scores are: opt bits E(32554) CCDS2398.1 ATIC gene_id:471|Hs108|chr2 ( 592) 3834 895.7 0 >>CCDS2398.1 ATIC gene_id:471|Hs108|chr2 (592 aa) initn: 3834 init1: 3834 opt: 3834 Z-score: 4786.8 bits: 895.7 E(32554): 0 Smith-Waterman score: 3834; 100.0% identity (100.0% similar) in 592 aa overlap (1-592:1-592) 10 20 30 40 50 60 pF1KE1 MAPGQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 MAPGQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LGGRVKTLHPAVHAGILARNIPEDNADMARLDFNLIRVVACNLYPFVKTVASPGVTVEEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 LGGRVKTLHPAVHAGILARNIPEDNADMARLDFNLIRVVACNLYPFVKTVASPGVTVEEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VEQIDIGGVTLLRAAAKNHARVTVVCEPEDYVVVSTEMQSSESKDTSLETRRQLALKAFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 VEQIDIGGVTLLRAAAKNHARVTVVCEPEDYVVVSTEMQSSESKDTSLETRRQLALKAFT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 HTAQYDEAISDYFRKQYSKGVSQMPLRYGMNPHQTPAQLYTLQPKLPITVLNGAPGFINL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 HTAQYDEAISDYFRKQYSKGVSQMPLRYGMNPHQTPAQLYTLQPKLPITVLNGAPGFINL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 CDALNAWQLVKELKEALGIPAAASFKHVSPAGAAVGIPLSEDEAKVCMVYDLYKTLTPIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 CDALNAWQLVKELKEALGIPAAASFKHVSPAGAAVGIPLSEDEAKVCMVYDLYKTLTPIS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AAYARARGADRMSSFGDFVALSDVCDVPTAKIISREVSDGIIAPGYEEEALTILSKKKNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 AAYARARGADRMSSFGDFVALSDVCDVPTAKIISREVSDGIIAPGYEEEALTILSKKKNG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 NYCVLQMDQSYKPDENEVRTLFGLHLSQKRNNGVVDKSLFSNVVTKNKDLPESALRDLIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 NYCVLQMDQSYKPDENEVRTLFGLHLSQKRNNGVVDKSLFSNVVTKNKDLPESALRDLIV 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 ATIAVKYTQSNSVCYAKNGQVIGIGAGQQSRIHCTRLAGDKANYWWLRHHPQVLSMKFKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 ATIAVKYTQSNSVCYAKNGQVIGIGAGQQSRIHCTRLAGDKANYWWLRHHPQVLSMKFKT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 GVKRAEISNAIDQYVTGTIGEDEDLIKWKALFEEVPELLTEAEKKEWVEKLTEVSISSDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 GVKRAEISNAIDQYVTGTIGEDEDLIKWKALFEEVPELLTEAEKKEWVEKLTEVSISSDA 490 500 510 520 530 540 550 560 570 580 590 pF1KE1 FFPFRDNVDRAKRSGVAYIAAPSGSAADKVVIEACDELGIILAHTNLRLFHH :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 FFPFRDNVDRAKRSGVAYIAAPSGSAADKVVIEACDELGIILAHTNLRLFHH 550 560 570 580 590 592 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:05:50 2016 done: Mon Nov 7 02:05:50 2016 Total Scan time: 3.240 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]