FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE4454, 474 aa
  1>>>pF1KE4454 474 - 474 aa - 474 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1166+/-0.000396; mu= 19.3889+/- 0.025
 mean_var=70.3659+/-14.401, 0's: 0 Z-trim(111.7): 41  B-trim: 558 in 1/51
 Lambda= 0.152895
 statistics sampled from 20388 (20422) to 20388 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.608), E-opt: 0.2 (0.239), width:  16
 Scan time:  9.310

The best scores are:                                      opt bits E(85289)
NP_000169 (OMIM: 231900,266130,601002) glutathione ( 474) 3042 680.4 2.8e-195
NP_001309424 (OMIM: 231900,266130,601002) glutathi ( 474) 3042 680.4 2.8e-195
NP_001309423 (OMIM: 231900,266130,601002) glutathi ( 474) 3042 680.4 2.8e-195


>>NP_000169 (OMIM: 231900,266130,601002) glutathione syn  (474 aa)
 initn: 3042 init1: 3042 opt: 3042  Z-score: 3626.9  bits: 680.4 E(85289): 2.8e-195
Smith-Waterman score: 3042; 100.0% identity (100.0% similar) in 474 aa overlap (1-474:1-474)

               10        20        30        40        50        60
pF1KE4 MATNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MATNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 LLEQAYAVQMDFNLLVDAVSQNAAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LLEQAYAVQMDFNLLVDAVSQNAAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 LGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAVHRHVLSVLSKTKEAGKIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAVHRHVLSVLSKTKEAGKIL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 SNNPSKGLALGIAKAWELYGSPNALVLLIAQEKERNIFDQRAIENELLARNIHVIRRTFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SNNPSKGLALGIAKAWELYGSPNALVLLIAQEKERNIFDQRAIENELLARNIHVIRRTFE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 DISEKGSLDQDRRLFVDGQEIAVVYFRDGYMPRQYSLQNWEARLLLERSHAAKCPDIATQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DISEKGSLDQDRRLFVDGQEIAVVYFRDGYMPRQYSLQNWEARLLLERSHAAKCPDIATQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 LAGTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVGEEGDQAIAEALAAPSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LAGTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVGEEGDQAIAEALAAPSR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE4 FVLKPQREGGGNNLYGEEMVQALKQLKDSEERASYILMEKIEPEPFENCLLRPGSPARVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FVLKPQREGGGNNLYGEEMVQALKQLKDSEERASYILMEKIEPEPFENCLLRPGSPARVV
              370       380       390       400       410       420

              430       440       450       460       470    
pF1KE4 QCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 QCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV
              430       440       450       460       470    

>>NP_001309424 (OMIM: 231900,266130,601002) glutathione   (474 aa)
 initn: 3042 init1: 3042 opt: 3042  Z-score: 3626.9  bits: 680.4 E(85289): 2.8e-195
Smith-Waterman score: 3042; 100.0% identity (100.0% similar) in 474 aa overlap (1-474:1-474)

               10        20        30        40        50        60
pF1KE4 MATNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 LLEQAYAVQMDFNLLVDAVSQNAAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLEQAYAVQMDFNLLVDAVSQNAAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 LGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAVHRHVLSVLSKTKEAGKIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAVHRHVLSVLSKTKEAGKIL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 SNNPSKGLALGIAKAWELYGSPNALVLLIAQEKERNIFDQRAIENELLARNIHVIRRTFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SNNPSKGLALGIAKAWELYGSPNALVLLIAQEKERNIFDQRAIENELLARNIHVIRRTFE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 DISEKGSLDQDRRLFVDGQEIAVVYFRDGYMPRQYSLQNWEARLLLERSHAAKCPDIATQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DISEKGSLDQDRRLFVDGQEIAVVYFRDGYMPRQYSLQNWEARLLLERSHAAKCPDIATQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 LAGTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVGEEGDQAIAEALAAPSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAGTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVGEEGDQAIAEALAAPSR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE4 FVLKPQREGGGNNLYGEEMVQALKQLKDSEERASYILMEKIEPEPFENCLLRPGSPARVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVLKPQREGGGNNLYGEEMVQALKQLKDSEERASYILMEKIEPEPFENCLLRPGSPARVV
              370       380       390       400       410       420

              430       440       450       460       470    
pF1KE4 QCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV
              430       440       450       460       470    

>>NP_001309423 (OMIM: 231900,266130,601002) glutathione   (474 aa)
 initn: 3042 init1: 3042 opt: 3042  Z-score: 3626.9  bits: 680.4 E(85289): 2.8e-195
Smith-Waterman score: 3042; 100.0% identity (100.0% similar) in 474 aa overlap (1-474:1-474)

               10        20        30        40        50        60
pF1KE4 MATNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 LLEQAYAVQMDFNLLVDAVSQNAAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLEQAYAVQMDFNLLVDAVSQNAAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 LGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAVHRHVLSVLSKTKEAGKIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAVHRHVLSVLSKTKEAGKIL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 SNNPSKGLALGIAKAWELYGSPNALVLLIAQEKERNIFDQRAIENELLARNIHVIRRTFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SNNPSKGLALGIAKAWELYGSPNALVLLIAQEKERNIFDQRAIENELLARNIHVIRRTFE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 DISEKGSLDQDRRLFVDGQEIAVVYFRDGYMPRQYSLQNWEARLLLERSHAAKCPDIATQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DISEKGSLDQDRRLFVDGQEIAVVYFRDGYMPRQYSLQNWEARLLLERSHAAKCPDIATQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 LAGTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVGEEGDQAIAEALAAPSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAGTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVGEEGDQAIAEALAAPSR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE4 FVLKPQREGGGNNLYGEEMVQALKQLKDSEERASYILMEKIEPEPFENCLLRPGSPARVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVLKPQREGGGNNLYGEEMVQALKQLKDSEERASYILMEKIEPEPFENCLLRPGSPARVV
              370       380       390       400       410       420

              430       440       450       460       470    
pF1KE4 QCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV
              430       440       450       460       470    




474 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 01:01:07 2016 done: Sun Nov  6 01:01:08 2016
 Total Scan time:  9.310 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]