FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4454, 474 aa 1>>>pF1KE4454 474 - 474 aa - 474 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6869+/-0.000926; mu= 15.6597+/- 0.056 mean_var=66.2122+/-13.094, 0's: 0 Z-trim(104.4): 20 B-trim: 0 in 0/49 Lambda= 0.157618 statistics sampled from 7892 (7895) to 7892 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.615), E-opt: 0.2 (0.243), width: 16 Scan time: 3.250 The best scores are: opt bits E(32554) CCDS13245.1 GSS gene_id:2937|Hs108|chr20 ( 474) 3042 700.9 7.7e-202 >>CCDS13245.1 GSS gene_id:2937|Hs108|chr20 (474 aa) initn: 3042 init1: 3042 opt: 3042 Z-score: 3737.2 bits: 700.9 E(32554): 7.7e-202 Smith-Waterman score: 3042; 100.0% identity (100.0% similar) in 474 aa overlap (1-474:1-474) 10 20 30 40 50 60 pF1KE4 MATNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MATNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 LLEQAYAVQMDFNLLVDAVSQNAAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LLEQAYAVQMDFNLLVDAVSQNAAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAVHRHVLSVLSKTKEAGKIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAVHRHVLSVLSKTKEAGKIL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 SNNPSKGLALGIAKAWELYGSPNALVLLIAQEKERNIFDQRAIENELLARNIHVIRRTFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 SNNPSKGLALGIAKAWELYGSPNALVLLIAQEKERNIFDQRAIENELLARNIHVIRRTFE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 DISEKGSLDQDRRLFVDGQEIAVVYFRDGYMPRQYSLQNWEARLLLERSHAAKCPDIATQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 DISEKGSLDQDRRLFVDGQEIAVVYFRDGYMPRQYSLQNWEARLLLERSHAAKCPDIATQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LAGTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVGEEGDQAIAEALAAPSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LAGTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVGEEGDQAIAEALAAPSR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 FVLKPQREGGGNNLYGEEMVQALKQLKDSEERASYILMEKIEPEPFENCLLRPGSPARVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 FVLKPQREGGGNNLYGEEMVQALKQLKDSEERASYILMEKIEPEPFENCLLRPGSPARVV 370 380 390 400 410 420 430 440 450 460 470 pF1KE4 QCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV 430 440 450 460 470 474 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:01:06 2016 done: Sun Nov 6 01:01:06 2016 Total Scan time: 3.250 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]