FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1370, 249 aa 1>>>pF1KE1370 249 - 249 aa - 249 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0783+/-0.000816; mu= 15.1809+/- 0.049 mean_var=53.2201+/-10.507, 0's: 0 Z-trim(104.6): 21 B-trim: 16 in 1/52 Lambda= 0.175807 statistics sampled from 7971 (7977) to 7971 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.245), width: 16 Scan time: 2.190 The best scores are: opt bits E(32554) CCDS8566.1 TPI1 gene_id:7167|Hs108|chr12 ( 249) 1649 426.1 1.1e-119 CCDS53740.1 TPI1 gene_id:7167|Hs108|chr12 ( 286) 1649 426.1 1.3e-119 CCDS58206.1 TPI1 gene_id:7167|Hs108|chr12 ( 167) 1096 285.7 1.3e-77 >>CCDS8566.1 TPI1 gene_id:7167|Hs108|chr12 (249 aa) initn: 1649 init1: 1649 opt: 1649 Z-score: 2262.1 bits: 426.1 E(32554): 1.1e-119 Smith-Waterman score: 1649; 100.0% identity (100.0% similar) in 249 aa overlap (1-249:1-249) 10 20 30 40 50 60 pF1KE1 MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS85 MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 AVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS85 AVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS85 GLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS85 QAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPE 190 200 210 220 230 240 pF1KE1 FVDIINAKQ ::::::::: CCDS85 FVDIINAKQ >>CCDS53740.1 TPI1 gene_id:7167|Hs108|chr12 (286 aa) initn: 1649 init1: 1649 opt: 1649 Z-score: 2261.2 bits: 426.1 E(32554): 1.3e-119 Smith-Waterman score: 1649; 100.0% identity (100.0% similar) in 249 aa overlap (1-249:38-286) 10 20 30 pF1KE1 MAPSRKFFVGGNWKMNGRKQSLGELIGTLN :::::::::::::::::::::::::::::: CCDS53 AEFHFAALYISGQWPRLRADTDLQRLGSSAMAPSRKFFVGGNWKMNGRKQSLGELIGTLN 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE1 AAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 AAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGAT 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE1 WVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 WVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKV 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE1 IADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 IADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYG 190 200 210 220 230 240 220 230 240 pF1KE1 GSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINAKQ ::::::::::::::::::::::::::::::::::::::: CCDS53 GSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINAKQ 250 260 270 280 >>CCDS58206.1 TPI1 gene_id:7167|Hs108|chr12 (167 aa) initn: 1096 init1: 1096 opt: 1096 Z-score: 1506.9 bits: 285.7 E(32554): 1.3e-77 Smith-Waterman score: 1096; 100.0% identity (100.0% similar) in 167 aa overlap (83-249:1-167) 60 70 80 90 100 110 pF1KE1 RQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQ :::::::::::::::::::::::::::::: CCDS58 MIKDCGATWVVLGHSERRHVFGESDELIGQ 10 20 30 120 130 140 150 160 170 pF1KE1 KVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 KVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIG 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE1 TGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 TGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLV 100 110 120 130 140 150 240 pF1KE1 GGASLKPEFVDIINAKQ ::::::::::::::::: CCDS58 GGASLKPEFVDIINAKQ 160 249 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:11:09 2016 done: Mon Nov 7 02:11:09 2016 Total Scan time: 2.190 Total Display time: -0.050 Function used was FASTA [36.3.4 Apr, 2011]