FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9441, 582 aa 1>>>pF1KB9441 582 - 582 aa - 582 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.0822+/-0.00114; mu= -8.6574+/- 0.068 mean_var=255.2220+/-51.668, 0's: 0 Z-trim(110.4): 30 B-trim: 4 in 1/51 Lambda= 0.080281 statistics sampled from 11547 (11569) to 11547 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.355), width: 16 Scan time: 3.480 The best scores are: opt bits E(32554) CCDS46847.2 DCP1A gene_id:55802|Hs108|chr3 ( 582) 3773 450.5 2.6e-126 CCDS74946.1 DCP1A gene_id:55802|Hs108|chr3 ( 544) 2414 293.1 6e-79 CCDS31727.1 DCP1B gene_id:196513|Hs108|chr12 ( 617) 701 94.7 3.6e-19 CCDS81651.1 DCP1B gene_id:196513|Hs108|chr12 ( 153) 455 66.0 3.9e-11 >>CCDS46847.2 DCP1A gene_id:55802|Hs108|chr3 (582 aa) initn: 3773 init1: 3773 opt: 3773 Z-score: 2381.0 bits: 450.5 E(32554): 2.6e-126 Smith-Waterman score: 3773; 100.0% identity (100.0% similar) in 582 aa overlap (1-582:1-582) 10 20 30 40 50 60 pF1KB9 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 PGLQPSTQLSNLGSTETLEEMPSGSQDKSAPSGHKHLTVEELFGTSLPKEQPAVVGLDSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 PGLQPSTQLSNLGSTETLEEMPSGSQDKSAPSGHKHLTVEELFGTSLPKEQPAVVGLDSE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 EMERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 EMERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASIT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB9 QSNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 QSNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB9 PELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 PELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVAS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB9 FSPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 FSPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB9 AIPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 AIPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSI 490 500 510 520 530 540 550 560 570 580 pF1KB9 ILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL :::::::::::::::::::::::::::::::::::::::::: CCDS46 ILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL 550 560 570 580 >>CCDS74946.1 DCP1A gene_id:55802|Hs108|chr3 (544 aa) initn: 2395 init1: 2395 opt: 2414 Z-score: 1530.8 bits: 293.1 E(32554): 6e-79 Smith-Waterman score: 3442; 93.5% identity (93.5% similar) in 582 aa overlap (1-582:1-544) 10 20 30 40 50 60 pF1KB9 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISS :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYER---------- 130 140 150 160 170 190 200 210 220 230 240 pF1KB9 PGLQPSTQLSNLGSTETLEEMPSGSQDKSAPSGHKHLTVEELFGTSLPKEQPAVVGLDSE :::::::::::::::::::::::::::::::: CCDS74 ----------------------------SAPSGHKHLTVEELFGTSLPKEQPAVVGLDSE 180 190 200 250 260 270 280 290 300 pF1KB9 EMERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 EMERLPGDASQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASIT 210 220 230 240 250 260 310 320 330 340 350 360 pF1KB9 QSNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 QSNEKHAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPV 270 280 290 300 310 320 370 380 390 400 410 420 pF1KB9 PELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 PELSHASLIANQSPFRAPLNVTNTAGTSLPSVDLLQKLRLTPQHDQIQTQPLGKGAMVAS 330 340 350 360 370 380 430 440 450 460 470 480 pF1KB9 FSPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 FSPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLAPLQSMQQNQDPEVFVQPKVLSS 390 400 410 420 430 440 490 500 510 520 530 540 pF1KB9 AIPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 AIPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLTIGTPESQRKPSI 450 460 470 480 490 500 550 560 570 580 pF1KB9 ILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL :::::::::::::::::::::::::::::::::::::::::: CCDS74 ILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL 510 520 530 540 >>CCDS31727.1 DCP1B gene_id:196513|Hs108|chr12 (617 aa) initn: 831 init1: 594 opt: 701 Z-score: 457.7 bits: 94.7 E(32554): 3.6e-19 Smith-Waterman score: 817; 33.3% identity (59.0% similar) in 630 aa overlap (8-575:13-610) 10 20 30 40 50 pF1KB9 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLF :...:::::..:::::. :.:...::::::: .::.:::::.::::: CCDS31 MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB9 VYRRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDC :: ::::: :::::.:::.:.: .::..:::.:::..:::::::: ::::.::::::..: CCDS31 VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEEC 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB9 HRIAKLMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGD .:::.:: .... : ...:.. :: :. .. . .:::.:: .::::: . . CCDS31 QRIAELMKNLTQYEQLKAHQGTGAGISPVILNS-GEGKEVDILRMLIKAKDEYTKCK--- 130 140 150 160 170 180 190 200 210 220 pF1KB9 SNISSPGLQPSTQ--LSNLGSTETLEEMPSGSQDKSAPSGHK-------HLTVEELFGTS . : : :.. .: . . . :: .:.. :. .. ::.. ::: . CCDS31 -TCSEPKKITSSSAIYDNPNLIKPIPVKPSENQQQRIPQPNQTLDPEPQHLSLTALFGKQ 180 190 200 210 220 230 230 240 250 260 pF1KB9 LPK------EQPAVVGLDSEEM----ERLP---G---DASQKEPNSFLPFPFE-QLGGAP : : .. ..... :.:: : . : .:: : :.: :: : CCDS31 DKATCQETVEPPQTLHQQQQQQQQQQEKLPIRQGVVRSLSYEEPRRHSP-PIEKQL--CP 240 250 260 270 280 290 270 280 290 300 310 320 pF1KB9 QSETLGVPSAAHHSVQPEITTPVLITPASITQSNEKHAPTYTIPLSPVLSPTLPAEAPTA . : : :: : :. : . : . . . .:: .: : . :. CCDS31 AIQKLMVRSADLH--------PLSELPENRPCENGSTHSAGEFFTGPV-QPGSPHNIGTS 300 310 320 330 340 330 340 350 360 370 380 pF1KB9 QVPPSLPRNSTMMQAVKTTP---RQRSPLLNQPVPELSHASLIANQSPFRAPLNVTNTA- . . :...... ...:: . .: . :.: : :.: :.: ::: .:: .: CCDS31 RGVQNASRTQNLFEKLQSTPGAANKCDP--STPAPA-SSAAL--NRS--RAPTSVTPVAP 350 360 370 380 390 390 400 410 420 430 pF1KB9 --GTSLPSVDLLQKLRLTPQ------HDQIQ-TQPLGKGAMVASFSPAAGQLATPE---- : . : .. : :: : . : : : . .: . ..: .. : CCDS31 GKGLAQPPQAYFNG-SLPPQTVGHQAHGREQSTLPRQTLPISGSQTGSSGVISPQELLKK 400 410 420 430 440 450 440 450 460 470 480 pF1KB9 -SFIEPPSKT-AAARVAASASLSNMVLA-----PLQSMQQNQDPEVFVQPKVLSSAIPVA .... .. :. : : .:.. .. . ::.: :. :.. : ... : CCDS31 LQIVQQEQQLHASNRPALAAKFPVLAQSSGTGKPLESWI-NKTPNTEQQTPLFQVISP-Q 460 470 480 490 500 510 490 500 510 520 530 pF1KB9 GAPLVTATTTAVSSVLLAPSVFQQTVT-----RSSDLERKASSPSP---LTIGTPESQRK : .::. :.:..: :: : .. : : : ... : .. : .. . CCDS31 RIP-----ATAAPSLLMSPMVFAQPTSVPPKERESGLLPVGGQEPPAAATSLLLPIQSPE 520 530 540 550 560 540 550 560 570 580 pF1KB9 PSII----LSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKDNHNL ::.: :.: :::..:..::.::..::. ..:.:: .:. CCDS31 PSVITSSPLTKLQLQEALLYLIQNDDNFLNIIYEAYLFSMTQAAMKKTM 570 580 590 600 610 >>CCDS81651.1 DCP1B gene_id:196513|Hs108|chr12 (153 aa) initn: 455 init1: 455 opt: 455 Z-score: 313.4 bits: 66.0 E(32554): 3.9e-11 Smith-Waterman score: 455; 69.9% identity (93.5% similar) in 93 aa overlap (8-100:13-105) 10 20 30 40 50 pF1KB9 MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLF :...:::::..:::::. :.:...::::::: .::.:::::.::::: CCDS81 MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB9 VYRRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDC :: ::::: :::::.:::.:.: .::..:::.:::..:::::::: CCDS81 VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARCESFLLQWVVLLLK 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB9 HRIAKLMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGD CCDS81 FGQVFKIVQCLPLCLHLVSVAMGGVSILTNVNV 130 140 150 582 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:13:51 2016 done: Mon Nov 7 02:13:52 2016 Total Scan time: 3.480 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]