FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6223, 240 aa 1>>>pF1KE6223 240 - 240 aa - 240 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0267+/-0.000759; mu= 15.5357+/- 0.046 mean_var=61.8805+/-12.268, 0's: 0 Z-trim(107.6): 29 B-trim: 0 in 0/51 Lambda= 0.163041 statistics sampled from 9658 (9666) to 9658 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.686), E-opt: 0.2 (0.297), width: 16 Scan time: 1.630 The best scores are: opt bits E(32554) CCDS33617.1 GSTT2B gene_id:653689|Hs108|chr22 ( 244) 824 202.1 2.8e-52 >>CCDS33617.1 GSTT2B gene_id:653689|Hs108|chr22 (244 aa) initn: 809 init1: 522 opt: 824 Z-score: 1052.1 bits: 202.1 E(32554): 2.8e-52 Smith-Waterman score: 824; 53.8% identity (74.4% similar) in 238 aa overlap (1-232:1-237) 10 20 30 40 50 60 pF1KE6 MGLELYLDLLSQPCRAVYIFAKKNDIPFELRIVDLIKGQHLSDACAQVNPLKKVPALKDG :::::.:::.::: :::::::::: ::.::: :::.:::: : :.: : :.:.:::: CCDS33 MGLELFLDLVSQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DFTLTESVAILLYLTRKYKVPDYWYPQDLQARARVDEYLAWQHTTLRRSCLRALWHKVMF :: :::: :::.::. ::..::.:::.:::::::: :::.:. .: . :: .:. CCDS33 DFILTESSAILIYLSCKYQTPDHWYPSDLQARARVHEYLGWHADCIRGTFGIPLWVQVLG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 PVFLGEPVSPQTLAATLAELDVTLQLLEDKFLQNKAFLTGPHISLADLVAITELMHPVGA :. .: : . . . . .: .:: :::::: .. ::.: ...::::.:. :::.::. CCDS33 PL-IGVQVPEEKVERNRTAMDQALQWLEDKFLGDRPFLAGQQVTLADLMALEELMQPVAL 130 140 150 160 170 190 200 210 220 230 pF1KE6 GCQVFEGRPKLATWRQRVEAAVGEDLFQEAHEVILKA------KDFPPADPTIKQKLMPW : ..:::::.::.:: :::: .: .: :::: .::. : .: .: : .. CCDS33 GYELFEGRPRLAAWRGRVEAFLGAELCQEAHSIILSILEQAAKKTLPTPSPEAYQAMLLR 180 190 200 210 220 230 240 pF1KE6 VLAMIR CCDS33 IARIP 240 240 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:13:46 2016 done: Tue Nov 8 11:13:46 2016 Total Scan time: 1.630 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]