FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2584, 206 aa 1>>>pF1KE2584 206 - 206 aa - 206 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3039+/-0.000784; mu= 9.2088+/- 0.047 mean_var=86.0743+/-17.361, 0's: 0 Z-trim(109.3): 38 B-trim: 523 in 1/50 Lambda= 0.138241 statistics sampled from 10749 (10780) to 10749 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.331), width: 16 Scan time: 2.040 The best scores are: opt bits E(32554) CCDS13540.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 206) 1300 268.5 2e-72 CCDS13545.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 200) 997 208.1 3e-54 CCDS13542.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 229) 997 208.1 3.4e-54 CCDS13543.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 209) 994 207.5 4.8e-54 CCDS13544.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 220) 983 205.3 2.3e-53 CCDS74752.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 222) 983 205.3 2.3e-53 CCDS13541.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 186) 710 150.8 4.9e-37 CCDS74753.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 152) 664 141.6 2.4e-34 CCDS58785.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 163) 532 115.3 2.1e-26 CCDS47879.1 TPD52 gene_id:7163|Hs108|chr8 ( 207) 447 98.4 3.3e-21 CCDS75759.1 TPD52 gene_id:7163|Hs108|chr8 ( 247) 443 97.7 6.7e-21 CCDS75757.1 TPD52 gene_id:7163|Hs108|chr8 ( 238) 433 95.6 2.6e-20 CCDS83122.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 209) 391 87.2 7.6e-18 CCDS5130.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 204) 385 86.0 1.7e-17 CCDS43502.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 175) 382 85.4 2.3e-17 CCDS55249.1 TPD52 gene_id:7163|Hs108|chr8 ( 184) 333 75.7 2.1e-14 CCDS34912.1 TPD52 gene_id:7163|Hs108|chr8 ( 224) 329 74.9 4.3e-14 CCDS75758.1 TPD52 gene_id:7163|Hs108|chr8 ( 233) 329 74.9 4.4e-14 CCDS34985.1 TPD52L3 gene_id:89882|Hs108|chr9 ( 132) 317 72.4 1.4e-13 CCDS34984.1 TPD52L3 gene_id:89882|Hs108|chr9 ( 136) 317 72.4 1.5e-13 CCDS34986.1 TPD52L3 gene_id:89882|Hs108|chr9 ( 140) 317 72.4 1.5e-13 CCDS34528.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 131) 310 71.0 3.7e-13 CCDS34527.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 144) 310 71.0 4e-13 CCDS75514.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 102) 307 70.4 4.5e-13 CCDS75513.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 191) 310 71.1 5.1e-13 >>CCDS13540.1 TPD52L2 gene_id:7165|Hs108|chr20 (206 aa) initn: 1300 init1: 1300 opt: 1300 Z-score: 1413.7 bits: 268.5 E(32554): 2e-72 Smith-Waterman score: 1300; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206) 10 20 30 40 50 60 pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG 130 140 150 160 170 180 190 200 pF1KE2 DRENGSDNLPSSAGSGDKPLSDPAPF :::::::::::::::::::::::::: CCDS13 DRENGSDNLPSSAGSGDKPLSDPAPF 190 200 >>CCDS13545.1 TPD52L2 gene_id:7165|Hs108|chr20 (200 aa) initn: 1022 init1: 694 opt: 997 Z-score: 1087.3 bits: 208.1 E(32554): 3e-54 Smith-Waterman score: 1083; 84.5% identity (84.5% similar) in 220 aa overlap (1-206:1-200) 10 20 30 40 50 60 pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV :::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAY-------------- 70 80 90 100 130 140 150 160 pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDM--------------RNSATFKS :::::::::::::::::::::::::::::::: :::::::: CCDS13 ------KKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS 110 120 130 140 150 160 170 180 190 200 pF1KE2 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF :::::::::::::::::::::::::::::::::::::::: CCDS13 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 170 180 190 200 >>CCDS13542.1 TPD52L2 gene_id:7165|Hs108|chr20 (229 aa) initn: 995 init1: 995 opt: 997 Z-score: 1086.4 bits: 208.1 E(32554): 3.4e-54 Smith-Waterman score: 1244; 90.0% identity (90.0% similar) in 229 aa overlap (1-206:1-229) 10 20 30 40 50 60 pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 70 80 90 100 110 120 130 140 150 pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMR--------------------- ::::::::::::::::::::::::::::::::::::::: CCDS13 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 130 140 150 160 170 180 160 170 180 190 200 pF1KE2 --NSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF ::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 190 200 210 220 >>CCDS13543.1 TPD52L2 gene_id:7165|Hs108|chr20 (209 aa) initn: 1037 init1: 694 opt: 994 Z-score: 1083.8 bits: 207.5 E(32554): 4.8e-54 Smith-Waterman score: 1065; 81.2% identity (81.2% similar) in 229 aa overlap (1-206:1-209) 10 20 30 40 50 60 pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV :::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAY-------------- 70 80 90 100 130 140 150 pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMR--------------------- ::::::::::::::::::::::::::::::::: CCDS13 ------KKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 110 120 130 140 150 160 160 170 180 190 200 pF1KE2 --NSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF ::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 170 180 190 200 >>CCDS13544.1 TPD52L2 gene_id:7165|Hs108|chr20 (220 aa) initn: 1008 init1: 983 opt: 983 Z-score: 1071.6 bits: 205.3 E(32554): 2.3e-53 Smith-Waterman score: 1262; 93.6% identity (93.6% similar) in 220 aa overlap (1-206:1-220) 10 20 30 40 50 60 pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 70 80 90 100 110 120 130 140 150 160 pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDM--------------RNSATFKS :::::::::::::::::::::::::::::::::::::: :::::::: CCDS13 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS 130 140 150 160 170 180 170 180 190 200 pF1KE2 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF :::::::::::::::::::::::::::::::::::::::: CCDS13 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 190 200 210 220 >>CCDS74752.1 TPD52L2 gene_id:7165|Hs108|chr20 (222 aa) initn: 983 init1: 983 opt: 983 Z-score: 1071.5 bits: 205.3 E(32554): 2.3e-53 Smith-Waterman score: 983; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158) 10 20 30 40 50 60 pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG :::::::::::::::::::::::::::::::::::::: CCDS74 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSLRLWVTERTAVTTSLPQRGVV 130 140 150 160 170 180 190 200 pF1KE2 DRENGSDNLPSSAGSGDKPLSDPAPF CCDS74 TSPCRIPHLSKPVVASPAAEHTQPSLSITAAALFSGAASQGG 190 200 210 220 >>CCDS13541.1 TPD52L2 gene_id:7165|Hs108|chr20 (186 aa) initn: 719 init1: 694 opt: 710 Z-score: 778.5 bits: 150.8 E(32554): 4.9e-37 Smith-Waterman score: 1121; 90.3% identity (90.3% similar) in 206 aa overlap (1-206:1-186) 10 20 30 40 50 60 pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV :::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAY-------------- 70 80 90 100 130 140 150 160 170 180 pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 ------KKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG 110 120 130 140 150 160 190 200 pF1KE2 DRENGSDNLPSSAGSGDKPLSDPAPF :::::::::::::::::::::::::: CCDS13 DRENGSDNLPSSAGSGDKPLSDPAPF 170 180 >>CCDS74753.1 TPD52L2 gene_id:7165|Hs108|chr20 (152 aa) initn: 955 init1: 659 opt: 664 Z-score: 730.3 bits: 141.6 E(32554): 2.4e-34 Smith-Waterman score: 851; 73.8% identity (73.8% similar) in 206 aa overlap (1-206:1-152) 10 20 30 40 50 60 pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV ::::::::::::::::::::::::::::::::::::::::::::: CCDS74 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA--------------- 70 80 90 100 130 140 150 160 170 180 pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG ::::::::::::::::::::: CCDS74 ---------------------------------------NSATFKSFEDRVGTIKSKVVG 110 120 190 200 pF1KE2 DRENGSDNLPSSAGSGDKPLSDPAPF :::::::::::::::::::::::::: CCDS74 DRENGSDNLPSSAGSGDKPLSDPAPF 130 140 150 >>CCDS58785.1 TPD52L2 gene_id:7165|Hs108|chr20 (163 aa) initn: 586 init1: 516 opt: 532 Z-score: 587.5 bits: 115.3 E(32554): 2.1e-26 Smith-Waterman score: 932; 88.7% identity (88.7% similar) in 177 aa overlap (30-206:7-163) 10 20 30 40 50 60 pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI ::::::::::::::::::::::::::::::: CCDS58 MDSAGQGVAARTPAVEGLTEAEEEELRAELTKVEEEI 10 20 30 70 80 90 100 110 120 pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV :::::::::::::::::::::::::::::::::::::::::::::: CCDS58 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAY-------------- 40 50 60 70 80 130 140 150 160 170 180 pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 ------KKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG 90 100 110 120 130 190 200 pF1KE2 DRENGSDNLPSSAGSGDKPLSDPAPF :::::::::::::::::::::::::: CCDS58 DRENGSDNLPSSAGSGDKPLSDPAPF 140 150 160 >>CCDS47879.1 TPD52 gene_id:7163|Hs108|chr8 (207 aa) initn: 466 init1: 326 opt: 447 Z-score: 494.3 bits: 98.4 E(32554): 3.3e-21 Smith-Waterman score: 461; 43.7% identity (64.9% similar) in 222 aa overlap (10-205:1-200) 10 20 30 40 50 pF1KE2 MDSAGQDINLNSPNKGLL-SDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEE .. ..::: .: . . : ::: :.: :.: :.:::: ::.::::: CCDS47 MDRGEQGLLRTDPVPEEGED--VAATISATETLSEEEQEELRRELAKVEEE 10 20 30 40 60 70 80 90 100 110 pF1KE2 IVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEK : :: :::::::.: .:.::.::...: :::::....:.:: ..::: CCDS47 IQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAY------------- 50 60 70 80 90 120 130 140 150 pF1KE2 VTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD---------------------- :::.:::::::::.:::.:.:::.:..:: : CCDS47 -------KKTSETLSQAGQKASAAFSSVGSVITKKLEDVKLQAFSHSFSIRSIQHSISMP 100 110 120 130 140 160 170 180 190 200 pF1KE2 -MRNSATFKSFEDRVGTIKSKVVGDRENGSD--NLPSSAGSGDKPLSDPAPF :::: ::::::..: ..:::: : . :.: .. .::.... ..: : CCDS47 AMRNSPTFKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLPEKTQESL 150 160 170 180 190 200 206 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 16:34:05 2016 done: Tue Nov 8 16:34:06 2016 Total Scan time: 2.040 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]