FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1528, 152 aa 1>>>pF1KE1528 152 - 152 aa - 152 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0957+/-0.000572; mu= 13.2181+/- 0.035 mean_var=63.6743+/-12.592, 0's: 0 Z-trim(112.3): 64 B-trim: 0 in 0/54 Lambda= 0.160728 statistics sampled from 12989 (13054) to 12989 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.78), E-opt: 0.2 (0.401), width: 16 Scan time: 1.800 The best scores are: opt bits E(32554) CCDS4174.1 UBE2B gene_id:7320|Hs108|chr5 ( 152) 1033 247.2 2.9e-66 CCDS14580.1 UBE2A gene_id:7319|Hs108|chrX ( 152) 993 237.9 1.8e-63 CCDS78500.1 UBE2A gene_id:7319|Hs108|chrX ( 119) 775 187.3 2.5e-48 CCDS14581.1 UBE2A gene_id:7319|Hs108|chrX ( 122) 464 115.2 1.3e-26 CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7 ( 147) 443 110.4 4.4e-25 CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10 ( 147) 440 109.7 7.1e-25 CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5 ( 147) 434 108.3 1.9e-24 CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 147) 432 107.8 2.6e-24 CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 148) 431 107.6 3e-24 CCDS3659.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 149) 429 107.1 4.2e-24 CCDS31875.1 UBE2N gene_id:7334|Hs108|chr12 ( 152) 423 105.7 1.1e-23 CCDS10433.1 UBE2I gene_id:7329|Hs108|chr16 ( 158) 422 105.5 1.4e-23 CCDS13370.1 UBE2C gene_id:11065|Hs108|chr20 ( 179) 411 103.0 8.8e-23 CCDS56244.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 160) 399 100.2 5.5e-22 CCDS2637.1 UBE2E2 gene_id:7325|Hs108|chr3 ( 201) 396 99.5 1.1e-21 CCDS2638.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 193) 395 99.3 1.2e-21 CCDS2282.1 UBE2E3 gene_id:10477|Hs108|chr2 ( 207) 394 99.1 1.5e-21 CCDS13374.1 UBE2C gene_id:11065|Hs108|chr20 ( 140) 391 98.3 1.8e-21 CCDS47275.1 UBE2D2 gene_id:7322|Hs108|chr5 ( 118) 374 94.3 2.4e-20 CCDS75172.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 118) 373 94.1 2.8e-20 CCDS33114.1 UBE2S gene_id:27338|Hs108|chr19 ( 222) 376 94.9 2.9e-20 CCDS1425.1 UBE2T gene_id:29089|Hs108|chr1 ( 197) 363 91.9 2.1e-19 CCDS2639.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 176) 353 89.5 9.7e-19 CCDS5814.1 UBE2H gene_id:7328|Hs108|chr7 ( 183) 348 88.4 2.2e-18 CCDS73139.1 UBE2D1 gene_id:7321|Hs108|chr10 ( 109) 327 83.4 4.3e-17 CCDS13372.1 UBE2C gene_id:11065|Hs108|chr20 ( 150) 324 82.8 9e-17 CCDS33976.1 UBE2K gene_id:3093|Hs108|chr4 ( 200) 316 81.0 4.1e-16 CCDS13714.1 UBE2G2 gene_id:7327|Hs108|chr21 ( 165) 313 80.2 5.7e-16 CCDS12987.1 UBE2M gene_id:9040|Hs108|chr19 ( 183) 304 78.2 2.6e-15 CCDS13790.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 154) 303 77.9 2.7e-15 CCDS7960.1 UBE2L6 gene_id:9246|Hs108|chr11 ( 153) 301 77.4 3.7e-15 CCDS627.1 UBE2U gene_id:148581|Hs108|chr1 ( 226) 298 76.9 8.2e-15 CCDS47043.1 UBE2K gene_id:3093|Hs108|chr4 ( 157) 296 76.3 8.4e-15 CCDS58795.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 212) 290 75.0 2.8e-14 CCDS6546.1 UBE2R2 gene_id:54926|Hs108|chr9 ( 238) 283 73.4 9.5e-14 CCDS47874.2 UBE2W gene_id:55284|Hs108|chr8 ( 180) 275 71.5 2.7e-13 CCDS47875.2 UBE2W gene_id:55284|Hs108|chr8 ( 191) 274 71.2 3.4e-13 CCDS14.1 UBE2J2 gene_id:118424|Hs108|chr1 ( 259) 265 69.2 1.8e-12 CCDS12030.1 CDC34 gene_id:997|Hs108|chr19 ( 236) 260 68.0 3.8e-12 CCDS58796.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 122) 256 67.0 4.2e-12 CCDS33586.1 UBE2G2 gene_id:7327|Hs108|chr21 ( 137) 245 64.4 2.7e-11 >>CCDS4174.1 UBE2B gene_id:7320|Hs108|chr5 (152 aa) initn: 1033 init1: 1033 opt: 1033 Z-score: 1303.0 bits: 247.2 E(32554): 2.9e-66 Smith-Waterman score: 1033; 100.0% identity (100.0% similar) in 152 aa overlap (1-152:1-152) 10 20 30 40 50 60 pF1KE1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 70 80 90 100 110 120 130 140 150 pF1KE1 PANSQAAQLYQENKREYEKRVSAIVEQSWNDS :::::::::::::::::::::::::::::::: CCDS41 PANSQAAQLYQENKREYEKRVSAIVEQSWNDS 130 140 150 >>CCDS14580.1 UBE2A gene_id:7319|Hs108|chrX (152 aa) initn: 1006 init1: 993 opt: 993 Z-score: 1252.9 bits: 237.9 E(32554): 1.8e-63 Smith-Waterman score: 993; 96.0% identity (98.7% similar) in 151 aa overlap (1-151:1-151) 10 20 30 40 50 60 pF1KE1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS :::::::::::::::::::::.:::::::::::: ::::::::::::::::::::.:::. CCDS14 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 70 80 90 100 110 120 130 140 150 pF1KE1 PANSQAAQLYQENKREYEKRVSAIVEQSWNDS ::::::::::::::::::::::::::::: : CCDS14 PANSQAAQLYQENKREYEKRVSAIVEQSWRDC 130 140 150 >>CCDS78500.1 UBE2A gene_id:7319|Hs108|chrX (119 aa) initn: 784 init1: 771 opt: 775 Z-score: 981.3 bits: 187.3 E(32554): 2.5e-48 Smith-Waterman score: 775; 95.8% identity (98.3% similar) in 118 aa overlap (34-151:1-118) 10 20 30 40 50 60 pF1KE1 PARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEY : ::::::::::::::::::::.:::.::: CCDS78 MVWNAVIFGPEGTPFEDGTFKLTIEFTEEY 10 20 30 70 80 90 100 110 120 pF1KE1 PNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPAN :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 PNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPAN 40 50 60 70 80 90 130 140 150 pF1KE1 SQAAQLYQENKREYEKRVSAIVEQSWNDS :::::::::::::::::::::::::: : CCDS78 SQAAQLYQENKREYEKRVSAIVEQSWRDC 100 110 >>CCDS14581.1 UBE2A gene_id:7319|Hs108|chrX (122 aa) initn: 784 init1: 462 opt: 464 Z-score: 591.4 bits: 115.2 E(32554): 1.3e-26 Smith-Waterman score: 728; 78.1% identity (78.8% similar) in 151 aa overlap (1-151:1-121) 10 20 30 40 50 60 pF1KE1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS :::::::::::::::::::::.:::::::::::: ::::::::::::::: CCDS14 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFED---------- 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS :::::::::::::::::::::::::::::::::::::::: CCDS14 --------------------VYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 60 70 80 90 130 140 150 pF1KE1 PANSQAAQLYQENKREYEKRVSAIVEQSWNDS ::::::::::::::::::::::::::::: : CCDS14 PANSQAAQLYQENKREYEKRVSAIVEQSWRDC 100 110 120 >>CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7 (147 aa) initn: 400 init1: 400 opt: 443 Z-score: 563.9 bits: 110.4 E(32554): 4.4e-25 Smith-Waterman score: 443; 42.2% identity (79.3% similar) in 135 aa overlap (5-139:2-136) 10 20 30 40 50 60 pF1KE1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS : .:..... ::.:::. :..: .....:.:.:.::. .:.. :.: :.:.: CCDS54 MALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFP 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS .:: ::: : : .:..:::. ..::::::::...:::. ::..: :: ::: .:::.. CCDS54 TDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 60 70 80 90 100 110 130 140 150 pF1KE1 PANSQAAQLYQENKREYEKRVSAIVEQSWNDS : . :. :. ....:.. CCDS54 PLVPEIAHTYKADREKYNRLAREWTQKYAM 120 130 140 >>CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10 (147 aa) initn: 438 init1: 422 opt: 440 Z-score: 560.1 bits: 109.7 E(32554): 7.1e-25 Smith-Waterman score: 440; 41.5% identity (79.3% similar) in 135 aa overlap (5-139:2-136) 10 20 30 40 50 60 pF1KE1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS : .:...... ::.:::. :..: .....:.:.:.:: . .. :.: :...: CCDS72 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFP 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS .:: ::: . : .:..:::. ..::::::::...:::. ::..: :: ::: .:::.. CCDS72 TDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 60 70 80 90 100 110 130 140 150 pF1KE1 PANSQAAQLYQENKREYEKRVSAIVEQSWNDS : . ::.:. .:..:.. CCDS72 PLVPDIAQIYKSDKEKYNRHAREWTQKYAM 120 130 140 >>CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5 (147 aa) initn: 396 init1: 384 opt: 434 Z-score: 552.6 bits: 108.3 E(32554): 1.9e-24 Smith-Waterman score: 434; 40.0% identity (79.3% similar) in 135 aa overlap (5-139:2-136) 10 20 30 40 50 60 pF1KE1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS : .:. .... : .:::. :..: .....:.:.:.::. .:.. :.: :.:.: CCDS43 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFP 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS .:: ::: : : ....:::. ..::::::::...:::. .:..: :: ::: .:::.. CCDS43 TDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 60 70 80 90 100 110 130 140 150 pF1KE1 PANSQAAQLYQENKREYEKRVSAIVEQSWNDS : . :..:. ....:.. CCDS43 PLVPEIARIYKTDREKYNRIAREWTQKYAM 120 130 140 >>CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4 (147 aa) initn: 396 init1: 384 opt: 432 Z-score: 550.1 bits: 107.8 E(32554): 2.6e-24 Smith-Waterman score: 432; 40.6% identity (78.3% similar) in 138 aa overlap (5-142:2-138) 10 20 30 40 50 60 pF1KE1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS : .:. .... : .:::. :..: .....:.:.:.::. .:.. :.: :.:.: CCDS36 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFP 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS .:: ::: : : ....:::. ..::::::::...:::. .:..: :: ::: .:::.. CCDS36 TDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 60 70 80 90 100 110 130 140 150 pF1KE1 PANSQAAQLYQENKREYEKRVSAIVEQSWNDS : . :..:. .. .:. :.: CCDS36 PLVPEIARIYKTDRDKYN-RISREWTQKYAM 120 130 140 >>CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4 (148 aa) initn: 396 init1: 384 opt: 431 Z-score: 548.8 bits: 107.6 E(32554): 3e-24 Smith-Waterman score: 431; 40.0% identity (78.5% similar) in 135 aa overlap (5-139:2-136) 10 20 30 40 50 60 pF1KE1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS : .:. .... : .:::. :..: .....:.:.:.::. .:.. :.: :.:.: CCDS36 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFP 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS .:: ::: : : ....:::. ..::::::::...:::. .:..: :: ::: .:::.. CCDS36 TDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 60 70 80 90 100 110 130 140 150 pF1KE1 PANSQAAQLYQENKREYEKRVSAIVEQSWNDS : . :..:. .. .:.. CCDS36 PLVPEIARIYKTDRDKYNRLAREWTEKYAML 120 130 140 >>CCDS3659.1 UBE2D3 gene_id:7323|Hs108|chr4 (149 aa) initn: 396 init1: 384 opt: 429 Z-score: 546.2 bits: 107.1 E(32554): 4.2e-24 Smith-Waterman score: 429; 40.9% identity (78.1% similar) in 137 aa overlap (6-142:5-140) 10 20 30 40 50 60 pF1KE1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS :. : .... : .:::. :..: .....:.:.:.::. .:.. :.: :.:.: CCDS36 MLSNRKCLSKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFP 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS .:: ::: : : ....:::. ..::::::::...:::. .:..: :: ::: .:::.. CCDS36 TDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 60 70 80 90 100 110 130 140 150 pF1KE1 PANSQAAQLYQENKREYEKRVSAIVEQSWNDS : . :..:. .. .:. :.: CCDS36 PLVPEIARIYKTDRDKYN-RISREWTQKYAM 120 130 140 152 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:18:26 2016 done: Mon Nov 7 02:18:27 2016 Total Scan time: 1.800 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]