FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1393, 93 aa 1>>>pF1KE1393 93 - 93 aa - 93 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8988+/-0.000375; mu= 10.7233+/- 0.023 mean_var=69.9300+/-14.069, 0's: 0 Z-trim(113.7): 78 B-trim: 307 in 1/48 Lambda= 0.153371 statistics sampled from 23096 (23184) to 23096 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.673), E-opt: 0.2 (0.272), width: 16 Scan time: 3.460 The best scores are: opt bits E(85289) NP_001306130 (OMIM: 123885) protein S100-A8 isofor ( 93) 608 143.0 6.5e-35 NP_002955 (OMIM: 123885) protein S100-A8 isoform d ( 93) 608 143.0 6.5e-35 NP_001306127 (OMIM: 123885) protein S100-A8 isofor ( 101) 608 143.1 6.9e-35 NP_001306126 (OMIM: 123885) protein S100-A8 isofor ( 116) 608 143.1 7.6e-35 NP_001306125 (OMIM: 123885) protein S100-A8 isofor ( 117) 608 143.1 7.7e-35 NP_005612 (OMIM: 603112) protein S100-A12 [Homo sa ( 92) 203 53.4 6.1e-08 NP_005971 (OMIM: 600614) protein S100-P [Homo sapi ( 95) 197 52.1 1.6e-07 NP_006262 (OMIM: 176940) protein S100-A1 [Homo sap ( 94) 186 49.7 8.4e-07 XP_016883913 (OMIM: 176990) PREDICTED: protein S10 ( 92) 181 48.5 1.8e-06 NP_006263 (OMIM: 176990) protein S100-B [Homo sapi ( 92) 181 48.5 1.8e-06 NP_002956 (OMIM: 123886) protein S100-A9 [Homo sap ( 114) 169 46.0 1.3e-05 NP_062427 (OMIM: 114210) protein S100-A4 [Homo sap ( 101) 164 44.8 2.6e-05 NP_002952 (OMIM: 114210) protein S100-A4 [Homo sap ( 101) 164 44.8 2.6e-05 NP_002953 (OMIM: 176991) protein S100-A5 [Homo sap ( 92) 163 44.6 2.8e-05 XP_016857521 (OMIM: 176991) PREDICTED: protein S10 ( 92) 163 44.6 2.8e-05 XP_016857520 (OMIM: 176991) PREDICTED: protein S10 ( 92) 163 44.6 2.8e-05 XP_011508162 (OMIM: 176991) PREDICTED: protein S10 ( 104) 163 44.6 3.1e-05 XP_016857519 (OMIM: 176991) PREDICTED: protein S10 ( 110) 163 44.6 3.2e-05 XP_016857518 (OMIM: 176991) PREDICTED: protein S10 ( 133) 163 44.7 3.7e-05 NP_057274 (OMIM: 611312) cornulin [Homo sapiens] ( 495) 163 45.2 9.9e-05 NP_005969 (OMIM: 176993) protein S100-A2 [Homo sap ( 97) 152 42.2 0.00016 XP_016885330 (OMIM: 302020) PREDICTED: protein S10 ( 79) 150 41.6 0.00018 NP_004048 (OMIM: 302020) protein S100-G [Homo sapi ( 79) 150 41.6 0.00018 NP_570128 (OMIM: 610103) protein S100-Z [Homo sapi ( 99) 151 41.9 0.00019 XP_016864661 (OMIM: 610103) PREDICTED: protein S10 ( 99) 151 41.9 0.00019 XP_011541547 (OMIM: 610103) PREDICTED: protein S10 ( 99) 151 41.9 0.00019 XP_016864662 (OMIM: 610103) PREDICTED: protein S10 ( 99) 151 41.9 0.00019 XP_011541541 (OMIM: 610103) PREDICTED: protein S10 ( 99) 151 41.9 0.00019 XP_011541542 (OMIM: 610103) PREDICTED: protein S10 ( 99) 151 41.9 0.00019 XP_016864660 (OMIM: 610103) PREDICTED: protein S10 ( 99) 151 41.9 0.00019 XP_011541543 (OMIM: 610103) PREDICTED: protein S10 ( 99) 151 41.9 0.00019 XP_011541546 (OMIM: 610103) PREDICTED: protein S10 ( 99) 151 41.9 0.00019 NP_001116437 (OMIM: 613259) repetin [Homo sapiens] ( 784) 158 44.2 0.0003 NP_005611 (OMIM: 603114) protein S100-A11 [Homo sa ( 105) 146 40.9 0.00042 NP_002957 (OMIM: 114085) protein S100-A10 [Homo sa ( 97) 143 40.2 0.00063 NP_055439 (OMIM: 114110) protein S100-A6 [Homo sap ( 90) 141 39.7 0.0008 XP_016857522 (OMIM: 114110) PREDICTED: protein S10 ( 90) 141 39.7 0.0008 NP_002954 (OMIM: 600353) protein S100-A7 [Homo sap ( 101) 136 38.6 0.0019 XP_011507833 (OMIM: 616284) PREDICTED: filaggrin-2 (2239) 150 42.8 0.0023 NP_001014364 (OMIM: 616284) filaggrin-2 [Homo sapi (2391) 150 42.9 0.0024 XP_011508165 (OMIM: 601989) PREDICTED: protein S10 ( 98) 132 37.7 0.0034 NP_005970 (OMIM: 601989) protein S100-A13 [Homo sa ( 98) 132 37.7 0.0034 NP_001019384 (OMIM: 601989) protein S100-A13 [Homo ( 98) 132 37.7 0.0034 NP_001019382 (OMIM: 601989) protein S100-A13 [Homo ( 98) 132 37.7 0.0034 NP_001019383 (OMIM: 601989) protein S100-A13 [Homo ( 98) 132 37.7 0.0034 XP_011508164 (OMIM: 601989) PREDICTED: protein S10 ( 98) 132 37.7 0.0034 XP_011508166 (OMIM: 601989) PREDICTED: protein S10 ( 98) 132 37.7 0.0034 XP_016857525 (OMIM: 601989) PREDICTED: protein S10 ( 98) 132 37.7 0.0034 XP_005245491 (OMIM: 601989) PREDICTED: protein S10 ( 98) 132 37.7 0.0034 NP_001019381 (OMIM: 601989) protein S100-A13 [Homo ( 98) 132 37.7 0.0034 >>NP_001306130 (OMIM: 123885) protein S100-A8 isoform d (93 aa) initn: 608 init1: 608 opt: 608 Z-score: 747.8 bits: 143.0 E(85289): 6.5e-35 Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 93 aa overlap (1-93:1-93) 10 20 30 40 50 60 pF1KE1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIRKKGADVWFKELDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIRKKGADVWFKELDI 10 20 30 40 50 60 70 80 90 pF1KE1 NTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE ::::::::::::::::::::::::::::::::: NP_001 NTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE 70 80 90 >>NP_002955 (OMIM: 123885) protein S100-A8 isoform d [Ho (93 aa) initn: 608 init1: 608 opt: 608 Z-score: 747.8 bits: 143.0 E(85289): 6.5e-35 Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 93 aa overlap (1-93:1-93) 10 20 30 40 50 60 pF1KE1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIRKKGADVWFKELDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIRKKGADVWFKELDI 10 20 30 40 50 60 70 80 90 pF1KE1 NTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE ::::::::::::::::::::::::::::::::: NP_002 NTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE 70 80 90 >>NP_001306127 (OMIM: 123885) protein S100-A8 isoform c (101 aa) initn: 608 init1: 608 opt: 608 Z-score: 747.4 bits: 143.1 E(85289): 6.9e-35 Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 93 aa overlap (1-93:9-101) 10 20 30 40 50 pF1KE1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIRKKGAD :::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MWGKSVGIMLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIRKKGAD 10 20 30 40 50 60 60 70 80 90 pF1KE1 VWFKELDINTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE ::::::::::::::::::::::::::::::::::::::::: NP_001 VWFKELDINTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE 70 80 90 100 >>NP_001306126 (OMIM: 123885) protein S100-A8 isoform b (116 aa) initn: 608 init1: 608 opt: 608 Z-score: 746.5 bits: 143.1 E(85289): 7.6e-35 Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 93 aa overlap (1-93:24-116) 10 20 30 pF1KE1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKL ::::::::::::::::::::::::::::::::::::: NP_001 MSLVSCLSEDLVLFFRWGKSVGIMLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKL 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE1 LETECPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LETECPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE 70 80 90 100 110 >>NP_001306125 (OMIM: 123885) protein S100-A8 isoform a (117 aa) initn: 608 init1: 608 opt: 608 Z-score: 746.5 bits: 143.1 E(85289): 7.7e-35 Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 93 aa overlap (1-93:25-117) 10 20 30 pF1KE1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKK :::::::::::::::::::::::::::::::::::: NP_001 MSLVSCLSEDLKVLFFRWGKSVGIMLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKK 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE1 LLETECPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LLETECPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE 70 80 90 100 110 >>NP_005612 (OMIM: 603112) protein S100-A12 [Homo sapien (92 aa) initn: 146 init1: 146 opt: 203 Z-score: 263.6 bits: 53.4 E(85289): 6.1e-08 Smith-Waterman score: 203; 39.1% identity (66.3% similar) in 92 aa overlap (2-89:1-92) 10 20 30 40 50 pF1KE1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIR----KKGADVWFK .:.::. :..:....:.::. ::.: .. . .::.:: : . :. : : :. NP_005 MTKLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQ 10 20 30 40 50 60 70 80 90 pF1KE1 ELDINTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE :: : : :.::::. :: ::: ..:.: NP_005 GLDANQDEQVDFQEFISLVAIALKAAHYHTHKE 60 70 80 90 >>NP_005971 (OMIM: 600614) protein S100-P [Homo sapiens] (95 aa) initn: 190 init1: 114 opt: 197 Z-score: 256.2 bits: 52.1 E(85289): 1.6e-07 Smith-Waterman score: 197; 37.9% identity (69.0% similar) in 87 aa overlap (2-84:1-87) 10 20 30 40 50 pF1KE1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIR----KKGADVWFK .:::: :.. ::::. .:: .:. ... . .:: :.: : : ... : ..: .: NP_005 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLK 10 20 30 40 50 60 70 80 90 pF1KE1 ELDINTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE .:: : :. :.:.::...: . : :: NP_005 DLDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK 60 70 80 90 >>NP_006262 (OMIM: 176940) protein S100-A1 [Homo sapiens (94 aa) initn: 187 init1: 104 opt: 186 Z-score: 243.1 bits: 49.7 E(85289): 8.4e-07 Smith-Waterman score: 186; 36.2% identity (68.1% similar) in 94 aa overlap (1-90:1-94) 10 20 30 40 50 pF1KE1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIRKK----GADVWFK : .::: :....:.:.: .: .:. . . . .::.::.:: .. . ..: .: NP_006 MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK 10 20 30 40 50 60 60 70 80 90 pF1KE1 ELDINTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE ::: : :: :.:::...:: . :: .. :.: NP_006 ELDENGDGEVDFQEYVVLVAALTVACNNFFWENS 70 80 90 >>XP_016883913 (OMIM: 176990) PREDICTED: protein S100-B (92 aa) initn: 185 init1: 125 opt: 181 Z-score: 237.3 bits: 48.5 E(85289): 1.8e-06 Smith-Waterman score: 181; 33.3% identity (71.3% similar) in 87 aa overlap (2-84:1-87) 10 20 30 40 50 pF1KE1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIR----KKGADVWFK ..:::::. ..:::.:.:: .:. : . ...::.:...: .... .. .: .. XP_016 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVME 10 20 30 40 50 60 70 80 90 pF1KE1 ELDINTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE :: . :: .::::. .: . .: :. XP_016 TLDNDGDGECDFQEFMAFVAMVTTACHEFFEHE 60 70 80 90 >>NP_006263 (OMIM: 176990) protein S100-B [Homo sapiens] (92 aa) initn: 185 init1: 125 opt: 181 Z-score: 237.3 bits: 48.5 E(85289): 1.8e-06 Smith-Waterman score: 181; 33.3% identity (71.3% similar) in 87 aa overlap (2-84:1-87) 10 20 30 40 50 pF1KE1 MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIR----KKGADVWFK ..:::::. ..:::.:.:: .:. : . ...::.:...: .... .. .: .. NP_006 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVME 10 20 30 40 50 60 70 80 90 pF1KE1 ELDINTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE :: . :: .::::. .: . .: :. NP_006 TLDNDGDGECDFQEFMAFVAMVTTACHEFFEHE 60 70 80 90 93 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:19:34 2016 done: Mon Nov 7 02:19:34 2016 Total Scan time: 3.460 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]