FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1525, 257 aa 1>>>pF1KE1525 257 - 257 aa - 257 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2881+/-0.000384; mu= 15.5246+/- 0.024 mean_var=105.3569+/-22.430, 0's: 0 Z-trim(114.0): 155 B-trim: 33 in 1/56 Lambda= 0.124952 statistics sampled from 23373 (23546) to 23373 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.661), E-opt: 0.2 (0.276), width: 16 Scan time: 6.570 The best scores are: opt bits E(85289) NP_001992 (OMIM: 147140) high affinity immunoglobu ( 257) 1765 328.8 6e-90 NP_001121068 (OMIM: 146740,615707) low affinity im ( 253) 546 109.0 8.4e-24 XP_016856150 (OMIM: 601502) PREDICTED: high affini ( 281) 545 108.9 1e-23 NP_001121064 (OMIM: 146740,615707) low affinity im ( 358) 546 109.2 1.1e-23 NP_001121065 (OMIM: 146740,615707) low affinity im ( 254) 542 108.3 1.4e-23 NP_001121067 (OMIM: 146740,615707) low affinity im ( 254) 542 108.3 1.4e-23 NP_001316049 (OMIM: 146740,615707) low affinity im ( 254) 542 108.3 1.4e-23 NP_000560 (OMIM: 146740,615707) low affinity immun ( 359) 542 108.5 1.7e-23 NP_001017986 (OMIM: 601502) high affinity immunogl ( 280) 537 107.5 2.8e-23 NP_001257964 (OMIM: 610665) low affinity immunoglo ( 268) 526 105.5 1.1e-22 NP_000561 (OMIM: 610665) low affinity immunoglobul ( 233) 522 104.7 1.6e-22 NP_001231682 (OMIM: 610665) low affinity immunoglo ( 269) 522 104.7 1.7e-22 NP_001257965 (OMIM: 610665) low affinity immunoglo ( 216) 509 102.3 7.7e-22 XP_005245014 (OMIM: 146760) PREDICTED: high affini ( 375) 510 102.7 9.7e-22 NP_001231839 (OMIM: 601502) high affinity immunogl ( 224) 500 100.7 2.4e-21 NP_000557 (OMIM: 146760) high affinity immunoglobu ( 374) 501 101.1 3e-21 NP_003992 (OMIM: 152700,604590,611162) low affinit ( 310) 490 99.0 1e-20 XP_016856160 (OMIM: 152700,604590,611162) PREDICTE ( 310) 490 99.0 1e-20 XP_011507594 (OMIM: 152700,604590,611162) PREDICTE ( 234) 484 97.8 1.8e-20 NP_001002275 (OMIM: 152700,604590,611162) low affi ( 309) 485 98.1 1.9e-20 NP_001002274 (OMIM: 152700,604590,611162) low affi ( 291) 482 97.6 2.7e-20 XP_016856161 (OMIM: 152700,604590,611162) PREDICTE ( 291) 482 97.6 2.7e-20 XP_016856158 (OMIM: 152700,604590,611162) PREDICTE ( 324) 482 97.6 2.9e-20 NP_963857 (OMIM: 188030,612169) low affinity immun ( 323) 479 97.1 4.2e-20 NP_001002273 (OMIM: 152700,604590,611162) low affi ( 290) 477 96.7 5.1e-20 XP_016856159 (OMIM: 152700,604590,611162) PREDICTE ( 323) 477 96.7 5.5e-20 XP_011507593 (OMIM: 146790,152700,611162) PREDICTE ( 261) 468 95.0 1.5e-19 XP_011507592 (OMIM: 146790,152700,611162) PREDICTE ( 317) 468 95.1 1.7e-19 NP_001129691 (OMIM: 146790,152700,611162) low affi ( 317) 468 95.1 1.7e-19 XP_016856154 (OMIM: 146790,152700,611162) PREDICTE ( 353) 468 95.1 1.8e-19 XP_016856153 (OMIM: 146790,152700,611162) PREDICTE ( 353) 468 95.1 1.8e-19 NP_001177757 (OMIM: 152700,604590,611162) low affi ( 303) 467 94.9 1.8e-19 XP_011507589 (OMIM: 146790,152700,611162) PREDICTE ( 369) 468 95.2 1.8e-19 XP_016856156 (OMIM: 146790,152700,611162) PREDICTE ( 276) 465 94.5 2.2e-19 XP_016856155 (OMIM: 146790,152700,611162) PREDICTE ( 328) 465 94.6 2.5e-19 NP_067674 (OMIM: 146790,152700,611162) low affinit ( 316) 459 93.5 5.1e-19 XP_016856152 (OMIM: 146790,152700,611162) PREDICTE ( 368) 459 93.5 5.6e-19 XP_016856157 (OMIM: 146790,152700,611162) PREDICTE ( 275) 456 92.8 6.8e-19 NP_001275760 (OMIM: 609251) Fc receptor-like B iso ( 275) 450 91.8 1.4e-18 NP_001275758 (OMIM: 609251) Fc receptor-like B iso ( 318) 450 91.8 1.6e-18 NP_001307170 (OMIM: 609251) Fc receptor-like B iso ( 426) 450 92.0 1.9e-18 NP_001002901 (OMIM: 609251) Fc receptor-like B iso ( 426) 450 92.0 1.9e-18 NP_001275761 (OMIM: 609251) Fc receptor-like B iso ( 268) 438 89.6 6.3e-18 NP_001275759 (OMIM: 609251) Fc receptor-like B iso ( 311) 438 89.7 7e-18 NP_112572 (OMIM: 605876) Fc receptor-like protein ( 515) 362 76.2 1.3e-13 XP_011508336 (OMIM: 605876) PREDICTED: Fc receptor ( 514) 359 75.7 1.9e-13 XP_011508335 (OMIM: 605877) PREDICTED: Fc receptor ( 844) 353 74.8 5.5e-13 XP_011508333 (OMIM: 605877) PREDICTED: Fc receptor ( 884) 353 74.9 5.7e-13 XP_011508334 (OMIM: 605877) PREDICTED: Fc receptor ( 884) 353 74.9 5.7e-13 NP_112571 (OMIM: 605877) Fc receptor-like protein ( 977) 353 74.9 6.1e-13 >>NP_001992 (OMIM: 147140) high affinity immunoglobulin (257 aa) initn: 1765 init1: 1765 opt: 1765 Z-score: 1735.9 bits: 328.8 E(85289): 6e-90 Smith-Waterman score: 1765; 100.0% identity (100.0% similar) in 257 aa overlap (1-257:1-257) 10 20 30 40 50 60 pF1KE1 MAPAMESPTLLCVALLFFAPDGVLAVPQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAPAMESPTLLCVALLFFAPDGVLAVPQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 STKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQASAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 STKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQASAE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGKV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 WQLDYESEPLNITVIKAPREKYWLQFFIPLLVVILFAVDTGLFISTQQQVTFLLKIKRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WQLDYESEPLNITVIKAPREKYWLQFFIPLLVVILFAVDTGLFISTQQQVTFLLKIKRTR 190 200 210 220 230 240 250 pF1KE1 KGFRLLNPHPKPNPKNN ::::::::::::::::: NP_001 KGFRLLNPHPKPNPKNN 250 >>NP_001121068 (OMIM: 146740,615707) low affinity immuno (253 aa) initn: 543 init1: 494 opt: 546 Z-score: 548.3 bits: 109.0 E(85289): 8.4e-24 Smith-Waterman score: 546; 40.8% identity (65.8% similar) in 228 aa overlap (10-230:5-232) 10 20 30 40 50 60 pF1KE1 MAPAMESPTLLCVALLFFAPDGVLAVPQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVS :: .:::... :. . : : :.: : :... ..::: :.: : . NP_001 MWQLLLPTALLLLVSAGMRTDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDN 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 STKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQASAE ::.:::: :: :: : : .:::::.:: . . :.:: ::: :::::: NP_001 STQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRW 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 VVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGKV : : .:. ::::.:.: ..:: : ..:.. ::...: .. : .::..:::.:.: : NP_001 VFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLF 120 130 140 150 160 170 190 200 210 220 230 pF1KE1 WQLDYESEPLNITVIKAPREKYWLQFFIP-------LLVVILFAVDTGLFISTQQQVTFL . . :: .:::. .. . .:: : :..:.::::::::..:.. .. NP_001 GSKNVSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSS 180 190 200 210 220 230 240 250 pF1KE1 LKIKRTRKGFRLLNPHPKPNPKNN NP_001 TRDWKDHKFKWRKDPQDK 240 250 >>XP_016856150 (OMIM: 601502) PREDICTED: high affinity i (281 aa) initn: 532 init1: 507 opt: 545 Z-score: 546.8 bits: 108.9 E(85289): 1e-23 Smith-Waterman score: 545; 36.5% identity (72.1% similar) in 219 aa overlap (15-230:7-224) 10 20 30 40 50 pF1KE1 MAPAMESPTLLCVALLFFAP-DGVLAVPQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEV ::...: :: .. : ..:.::: .:. :..:: :. .. XP_016 MWFLTTLLLWVPVDGQVVDTTKAVITLQPPWVSVFQEETITLHCEVLHLPGS 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 SSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQASA :::.:: ::. .. .. : :..:. .:::::.::. ..:.:. ::. :::::.:. XP_016 SSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSS 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 EVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGK .: :::.:: ::::.:.. ::.:.::..:.:.:... : :..: .... .:::.:.: XP_016 RVFMEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSG- 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 VWQLDYESEPLNITVIKAPR--EKYWLQFFIPLLVVILFAVDTGLFISTQQQVTFLLKIK . . : : .. ..:. . :.. .. : : :.: :.: :... .... XP_016 MGKHRYTSAGISQYTVKGLQLPTPVWFHVLFYLAVGIMFLVNTVLWVTIRKELKRKKKWN 180 190 200 210 220 230 240 250 pF1KE1 RTRKGFRLLNPHPKPNPKNN XP_016 LEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQLQEGVHRKEPQGAT 240 250 260 270 280 >>NP_001121064 (OMIM: 146740,615707) low affinity immuno (358 aa) initn: 543 init1: 494 opt: 546 Z-score: 546.6 bits: 109.2 E(85289): 1.1e-23 Smith-Waterman score: 546; 40.8% identity (65.8% similar) in 228 aa overlap (10-230:110-337) 10 20 30 pF1KE1 MAPAMESPTLLCVALLFFAPDGVLAVPQKPKVSLNPPWN :: .:::... :. . : : :.: : NP_001 TSSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTDLPKAVVFLEPQWY 80 90 100 110 120 130 40 50 60 70 80 90 pF1KE1 RIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVN :... ..::: :.: : .::.:::: :: :: : : .:::::.:: . . NP_001 RVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNLST 140 150 160 170 180 190 100 110 120 130 140 150 pF1KE1 ESEPVYLEVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENH :.:: ::: :::::: : : .:. ::::.:.: ..:: : ..:.. ::...: NP_001 LSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNS 200 210 220 230 240 250 160 170 180 190 200 210 pF1KE1 NISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPREKYWLQFFIP-------LLV .. : .::..:::.:.: : . . :: .:::. .. . .:: : :.. NP_001 DFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITITQGLAVSTISSFFPPGYQVSFCLVM 260 270 280 290 300 310 220 230 240 250 pF1KE1 VILFAVDTGLFISTQQQVTFLLKIKRTRKGFRLLNPHPKPNPKNN :.::::::::..:.. .. NP_001 VLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK 320 330 340 350 >>NP_001121065 (OMIM: 146740,615707) low affinity immuno (254 aa) initn: 526 init1: 477 opt: 542 Z-score: 544.4 bits: 108.3 E(85289): 1.4e-23 Smith-Waterman score: 542; 40.9% identity (66.1% similar) in 230 aa overlap (10-230:5-233) 10 20 30 40 50 pF1KE1 MAPAMESPTLLCVALLFFAPDGVLAVPQKPK--VSLNPPWNRIFKGENVTLTCNGNNFFE :: .:::... : . . . :: : :.: : :... ..::: :.: : NP_001 MWQLLLPTALLLLVSAG-MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPE 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 VSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQAS .::.:::: :: :: : : .:::::.:: . . :.:: ::: :::::: NP_001 DNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAP 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTG : : .:. ::::.:.: ..:: : ..:.. ::...: .. : .::..:::.:.: : NP_001 RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRG 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 KVWQLDYESEPLNITVIKAPREKYWLQFFIP-------LLVVILFAVDTGLFISTQQQVT . . :: .:::. .. . .:: : :..:.::::::::..:.. .. NP_001 LFGSKNVSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIR 180 190 200 210 220 230 240 250 pF1KE1 FLLKIKRTRKGFRLLNPHPKPNPKNN NP_001 SSTRDWKDHKFKWRKDPQDK 240 250 >>NP_001121067 (OMIM: 146740,615707) low affinity immuno (254 aa) initn: 526 init1: 477 opt: 542 Z-score: 544.4 bits: 108.3 E(85289): 1.4e-23 Smith-Waterman score: 542; 40.9% identity (66.1% similar) in 230 aa overlap (10-230:5-233) 10 20 30 40 50 pF1KE1 MAPAMESPTLLCVALLFFAPDGVLAVPQKPK--VSLNPPWNRIFKGENVTLTCNGNNFFE :: .:::... : . . . :: : :.: : :... ..::: :.: : NP_001 MWQLLLPTALLLLVSAG-MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPE 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 VSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQAS .::.:::: :: :: : : .:::::.:: . . :.:: ::: :::::: NP_001 DNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAP 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTG : : .:. ::::.:.: ..:: : ..:.. ::...: .. : .::..:::.:.: : NP_001 RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRG 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 KVWQLDYESEPLNITVIKAPREKYWLQFFIP-------LLVVILFAVDTGLFISTQQQVT . . :: .:::. .. . .:: : :..:.::::::::..:.. .. NP_001 LFGSKNVSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIR 180 190 200 210 220 230 240 250 pF1KE1 FLLKIKRTRKGFRLLNPHPKPNPKNN NP_001 SSTRDWKDHKFKWRKDPQDK 240 250 >>NP_001316049 (OMIM: 146740,615707) low affinity immuno (254 aa) initn: 526 init1: 477 opt: 542 Z-score: 544.4 bits: 108.3 E(85289): 1.4e-23 Smith-Waterman score: 542; 40.9% identity (66.1% similar) in 230 aa overlap (10-230:5-233) 10 20 30 40 50 pF1KE1 MAPAMESPTLLCVALLFFAPDGVLAVPQKPK--VSLNPPWNRIFKGENVTLTCNGNNFFE :: .:::... : . . . :: : :.: : :... ..::: :.: : NP_001 MWQLLLPTALLLLVSAG-MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPE 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 VSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQAS .::.:::: :: :: : : .:::::.:: . . :.:: ::: :::::: NP_001 DNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAP 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTG : : .:. ::::.:.: ..:: : ..:.. ::...: .. : .::..:::.:.: : NP_001 RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRG 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 KVWQLDYESEPLNITVIKAPREKYWLQFFIP-------LLVVILFAVDTGLFISTQQQVT . . :: .:::. .. . .:: : :..:.::::::::..:.. .. NP_001 LFGSKNVSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIR 180 190 200 210 220 230 240 250 pF1KE1 FLLKIKRTRKGFRLLNPHPKPNPKNN NP_001 SSTRDWKDHKFKWRKDPQDK 240 250 >>NP_000560 (OMIM: 146740,615707) low affinity immunoglo (359 aa) initn: 526 init1: 477 opt: 542 Z-score: 542.6 bits: 108.5 E(85289): 1.7e-23 Smith-Waterman score: 542; 40.9% identity (66.1% similar) in 230 aa overlap (10-230:110-338) 10 20 30 pF1KE1 MAPAMESPTLLCVALLFFAPDGVLAVPQKPK--VSLNPP :: .:::... : . . . :: : :.: NP_000 TSSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAG-MRTEDLPKAVVFLEPQ 80 90 100 110 120 130 40 50 60 70 80 90 pF1KE1 WNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQ : :... ..::: :.: : .::.:::: :: :: : : .:::::.:: . NP_000 WYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNL 140 150 160 170 180 190 100 110 120 130 140 150 pF1KE1 VNESEPVYLEVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYE . :.:: ::: :::::: : : .:. ::::.:.: ..:: : ..:.. ::... NP_000 STLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHH 200 210 220 230 240 250 160 170 180 190 200 210 pF1KE1 NHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPREKYWLQFFIP-------L : .. : .::..:::.:.: : . . :: .:::. .. . .:: : : NP_000 NSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITITQGLAVSTISSFFPPGYQVSFCL 260 270 280 290 300 310 220 230 240 250 pF1KE1 LVVILFAVDTGLFISTQQQVTFLLKIKRTRKGFRLLNPHPKPNPKNN ..:.::::::::..:.. .. NP_000 VMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK 320 330 340 350 >>NP_001017986 (OMIM: 601502) high affinity immunoglobul (280 aa) initn: 521 init1: 496 opt: 537 Z-score: 539.1 bits: 107.5 E(85289): 2.8e-23 Smith-Waterman score: 537; 37.0% identity (72.1% similar) in 219 aa overlap (15-230:7-223) 10 20 30 40 50 pF1KE1 MAPAMESPTLLCVALLFFAP-DGVLAVPQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEV ::...: :: . . : ..:.::: .:. :.::: :. .. NP_001 MWFLTTLLLWVPVDGQVDTT-KAVITLQPPWVSVFQEETVTLHCEVLHLPGS 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 SSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQASA :::.:: ::. .. .. : :..:. .:::::.::. ..:.:. ::. :::::.:. NP_001 SSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSS 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 EVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGK .: :::.:: ::::.:.. ::.:.::..:.:.:... : :..: .... .:::.:.: NP_001 RVFMEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSG- 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 VWQLDYESEPLNITVIKAPR--EKYWLQFFIPLLVVILFAVDTGLFISTQQQVTFLLKIK . . : : .. ..:. . :.. .. : : :.: :.: :... .... NP_001 MGKHRYTSAGISQYTVKGLQLPTPVWFHVLFYLAVGIMFLVNTVLWVTIRKELKRKKKWN 180 190 200 210 220 230 240 250 pF1KE1 RTRKGFRLLNPHPKPNPKNN NP_001 LEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQLQEGVHRKEPQGAT 240 250 260 270 280 >>NP_001257964 (OMIM: 610665) low affinity immunoglobuli (268 aa) initn: 527 init1: 478 opt: 526 Z-score: 528.6 bits: 105.5 E(85289): 1.1e-22 Smith-Waterman score: 526; 39.9% identity (64.9% similar) in 228 aa overlap (10-230:41-268) 10 20 30 pF1KE1 MAPAMESPTLLCVALLFFAPDGVLAVPQKPKVSLNPPWN :: .:::... :. . : : :.: : NP_001 TPSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTDLPKAVVFLEPQWY 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE1 RIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVN ... ..::: :.: : .::.:::: .: :: : : .:::::.:: . . NP_001 SVLEKDSVTLKCQGAYSPEDNSTQWFHNENLISSQASSYFIDAATVNDSGEYRCQTNLST 80 90 100 110 120 130 100 110 120 130 140 150 pF1KE1 ESEPVYLEVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENH :.:: ::: :::::: : : .:. ::::.:.: ..:: : ..:. ::...: NP_001 LSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNS 140 150 160 170 180 190 160 170 180 190 200 210 pF1KE1 NISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPREKYWLQFFIP-------LLV .. : .::..:::.:.: : : . . :: .:::. .. . .: : :.. NP_001 DFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTISSFSPPGYQVSFCLVM 200 210 220 230 240 250 220 230 240 250 pF1KE1 VILFAVDTGLFISTQQQVTFLLKIKRTRKGFRLLNPHPKPNPKNN :.::::::::..:.. .. NP_001 VLLFAVDTGLYFSVKTNI 260 257 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:20:09 2016 done: Mon Nov 7 02:20:11 2016 Total Scan time: 6.570 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]