FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2612, 385 aa 1>>>pF1KE2612 385 - 385 aa - 385 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5546+/-0.000441; mu= 15.4117+/- 0.027 mean_var=70.1388+/-14.195, 0's: 0 Z-trim(109.1): 27 B-trim: 20 in 1/49 Lambda= 0.153142 statistics sampled from 17281 (17282) to 17281 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.558), E-opt: 0.2 (0.203), width: 16 Scan time: 5.900 The best scores are: opt bits E(85289) NP_057030 (OMIM: 605757) protein pelota homolog [H ( 385) 2502 562.4 6.4e-160 >>NP_057030 (OMIM: 605757) protein pelota homolog [Homo (385 aa) initn: 2502 init1: 2502 opt: 2502 Z-score: 2992.1 bits: 562.4 E(85289): 6.4e-160 Smith-Waterman score: 2502; 99.7% identity (100.0% similar) in 385 aa overlap (1-385:1-385) 10 20 30 40 50 60 pF1KE2 MKLVRKNIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 MKLVRKNIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 ALERFYEQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKF ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: NP_057 ALERFYEQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYLFQQAVKTDNKLLLENRSKF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 KANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLSQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 KANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLSQLT 310 320 330 340 350 360 370 380 pF1KE2 GVAAILRFPVPELSDQEGDSSSEED ::::::::::::::::::::::::: NP_057 GVAAILRFPVPELSDQEGDSSSEED 370 380 385 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 17:05:25 2016 done: Tue Nov 8 17:05:26 2016 Total Scan time: 5.900 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]