FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9982, 709 aa 1>>>pF1KB9982 709 - 709 aa - 709 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.3965+/-0.00129; mu= 1.3067+/- 0.078 mean_var=249.1580+/-51.564, 0's: 0 Z-trim(109.1): 75 B-trim: 520 in 2/50 Lambda= 0.081253 statistics sampled from 10607 (10661) to 10607 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.327), width: 16 Scan time: 3.650 The best scores are: opt bits E(32554) CCDS7952.1 SSRP1 gene_id:6749|Hs108|chr11 ( 709) 4672 561.7 1.4e-159 >>CCDS7952.1 SSRP1 gene_id:6749|Hs108|chr11 (709 aa) initn: 4672 init1: 4672 opt: 4672 Z-score: 2978.6 bits: 561.7 E(32554): 1.4e-159 Smith-Waterman score: 4672; 100.0% identity (100.0% similar) in 709 aa overlap (1-709:1-709) 10 20 30 40 50 60 pF1KB9 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB9 RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB9 YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB9 KKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 KKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB9 SFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPVEVKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 SFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPVEVKK 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB9 GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB9 EDARRDYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 EDARRDYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESF 610 620 630 640 650 660 670 680 690 700 pF1KB9 KSKEFVSSDESSSGENKSKKKRRRSEDSEEEELASTPPSSEDSASGSDE ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 KSKEFVSSDESSSGENKSKKKRRRSEDSEEEELASTPPSSEDSASGSDE 670 680 690 700 709 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:23:40 2016 done: Mon Nov 7 02:23:41 2016 Total Scan time: 3.650 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]