FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6335, 405 aa 1>>>pF1KE6335 405 - 405 aa - 405 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8466+/-0.000795; mu= 16.4771+/- 0.049 mean_var=98.3013+/-19.249, 0's: 0 Z-trim(110.5): 20 B-trim: 0 in 0/52 Lambda= 0.129358 statistics sampled from 11625 (11637) to 11625 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.71), E-opt: 0.2 (0.357), width: 16 Scan time: 2.860 The best scores are: opt bits E(32554) CCDS35177.1 UBAC1 gene_id:10422|Hs108|chr9 ( 405) 2629 500.7 1e-141 >>CCDS35177.1 UBAC1 gene_id:10422|Hs108|chr9 (405 aa) initn: 2629 init1: 2629 opt: 2629 Z-score: 2657.6 bits: 500.7 E(32554): 1e-141 Smith-Waterman score: 2629; 100.0% identity (100.0% similar) in 405 aa overlap (1-405:1-405) 10 20 30 40 50 60 pF1KE6 MFVQEEKIFAGKVLRLHICASDGAEWLEEATEDTSVEKLKERCLKHCAHGSLEDPKSITH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MFVQEEKIFAGKVLRLHICASDGAEWLEEATEDTSVEKLKERCLKHCAHGSLEDPKSITH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 HKLIHAASERVLSDARTILEENIQDQDVLLLIKKRAPSPLPKMADVSAEEKKKQDQKAPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 HKLIHAASERVLSDARTILEENIQDQDVLLLIKKRAPSPLPKMADVSAEEKKKQDQKAPD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 KEAILRATANLPSYNMDRAAVQTNMRDFQTELRKILVSLIEVAQKLLALNPDAVELFKKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 KEAILRATANLPSYNMDRAAVQTNMRDFQTELRKILVSLIEVAQKLLALNPDAVELFKKA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 NAMLDEDEDERVDEAALRQLTEMGFPENRATKALQLNHMSVPQAMEWLIEHAEDPTIDTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 NAMLDEDEDERVDEAALRQLTEMGFPENRATKALQLNHMSVPQAMEWLIEHAEDPTIDTP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 LPGQAPPEAEGATAAASEAAAGASATDEEARDELTEIFKKIRRKREFRADARAVISLMEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 LPGQAPPEAEGATAAASEAAAGASATDEEARDELTEIFKKIRRKREFRADARAVISLMEM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 GFDEKEVIDALRVNNNQQNAACEWLLGDRKPSPEELDKGIDPDSPLFQAILDNPVVQLGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 GFDEKEVIDALRVNNNQQNAACEWLLGDRKPSPEELDKGIDPDSPLFQAILDNPVVQLGL 310 320 330 340 350 360 370 380 390 400 pF1KE6 TNPKTLLAFEDMLENPLNSTQWMNDPETGPVMLQISRIFQTLNRT ::::::::::::::::::::::::::::::::::::::::::::: CCDS35 TNPKTLLAFEDMLENPLNSTQWMNDPETGPVMLQISRIFQTLNRT 370 380 390 400 405 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:13:12 2016 done: Tue Nov 8 12:13:13 2016 Total Scan time: 2.860 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]