FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4326, 328 aa 1>>>pF1KE4326 328 - 328 aa - 328 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.2746+/-0.00063; mu= 14.9078+/- 0.039 mean_var=148.0931+/-29.679, 0's: 0 Z-trim(117.5): 25 B-trim: 161 in 2/54 Lambda= 0.105392 statistics sampled from 18184 (18210) to 18184 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.842), E-opt: 0.2 (0.559), width: 16 Scan time: 2.860 The best scores are: opt bits E(32554) CCDS42815.1 IGFBP2 gene_id:3485|Hs108|chr2 ( 325) 2331 365.0 4.6e-101 CCDS82570.1 IGFBP2 gene_id:3485|Hs108|chr2 ( 181) 1261 202.0 2.9e-52 CCDS5505.1 IGFBP3 gene_id:3486|Hs108|chr7 ( 291) 503 87.0 2e-17 CCDS34632.1 IGFBP3 gene_id:3486|Hs108|chr7 ( 297) 456 79.9 2.9e-15 >>CCDS42815.1 IGFBP2 gene_id:3485|Hs108|chr2 (325 aa) initn: 2227 init1: 2227 opt: 2331 Z-score: 1927.9 bits: 365.0 E(32554): 4.6e-101 Smith-Waterman score: 2331; 99.1% identity (99.1% similar) in 328 aa overlap (1-328:1-325) 10 20 30 40 50 60 pF1KE4 MLPRVGCPALPLPPPPLLPLLPLLLLLLGASGGGGGARAEVLFRCPPCTPERLAACGPPP ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: CCDS42 MLPRVGCPALPLPPPPLLPLL---LLLLGASGGGGGARAEVLFRCPPCTPERLAACGPPP 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 VAPPAAVAAVAGGARMPCAELVREPGCGCCSVCARLEGEACGVYTPRCGQGLRCYPHPGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 VAPPAAVAAVAGGARMPCAELVREPGCGCCSVCARLEGEACGVYTPRCGQGLRCYPHPGS 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE4 ELPLQALVMGEGTCEKRRDAEYGASPEQVADNGDDHSEGGLVENHVDSTMNMLGGGGSAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 ELPLQALVMGEGTCEKRRDAEYGASPEQVADNGDDHSEGGLVENHVDSTMNMLGGGGSAG 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE4 RKPLKSGMKELAVFREKVTEQHRQMGKGGKHHLGLEEPKKLRPPPARTPCQQELDQVLER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 RKPLKSGMKELAVFREKVTEQHRQMGKGGKHHLGLEEPKKLRPPPARTPCQQELDQVLER 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE4 ISTMRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSLNGQRGECWCVNPNTGKLIQGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 ISTMRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSLNGQRGECWCVNPNTGKLIQGA 240 250 260 270 280 290 310 320 pF1KE4 PTIRGDPECHLFYNEQQEARGVHTQRMQ :::::::::::::::::::::::::::: CCDS42 PTIRGDPECHLFYNEQQEARGVHTQRMQ 300 310 320 >>CCDS82570.1 IGFBP2 gene_id:3485|Hs108|chr2 (181 aa) initn: 1261 init1: 1261 opt: 1261 Z-score: 1051.7 bits: 202.0 E(32554): 2.9e-52 Smith-Waterman score: 1261; 99.4% identity (100.0% similar) in 178 aa overlap (151-328:4-181) 130 140 150 160 170 180 pF1KE4 ELPLQALVMGEGTCEKRRDAEYGASPEQVADNGDDHSEGGLVENHVDSTMNMLGGGGSAG .::::::::::::::::::::::::::::: CCDS82 MPCNNGDDHSEGGLVENHVDSTMNMLGGGGSAG 10 20 30 190 200 210 220 230 240 pF1KE4 RKPLKSGMKELAVFREKVTEQHRQMGKGGKHHLGLEEPKKLRPPPARTPCQQELDQVLER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 RKPLKSGMKELAVFREKVTEQHRQMGKGGKHHLGLEEPKKLRPPPARTPCQQELDQVLER 40 50 60 70 80 90 250 260 270 280 290 300 pF1KE4 ISTMRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSLNGQRGECWCVNPNTGKLIQGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 ISTMRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSLNGQRGECWCVNPNTGKLIQGA 100 110 120 130 140 150 310 320 pF1KE4 PTIRGDPECHLFYNEQQEARGVHTQRMQ :::::::::::::::::::::::::::: CCDS82 PTIRGDPECHLFYNEQQEARGVHTQRMQ 160 170 180 >>CCDS5505.1 IGFBP3 gene_id:3486|Hs108|chr7 (291 aa) initn: 542 init1: 303 opt: 503 Z-score: 426.4 bits: 87.0 E(32554): 2e-17 Smith-Waterman score: 539; 33.2% identity (57.6% similar) in 304 aa overlap (21-312:13-286) 10 20 30 40 50 pF1KE4 MLPRVGCPALPLPPPPLLPLLPLLLLLLG---ASGGGGGARAEVLFRCPPCTPERLAACG : ::.:: : : .:...: . :: :: . :: :. CCDS55 MQRARPTLWAAALTLLVLLRGPPVARAGASSAGLGPVVRCEPCDARALAQCA 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 PPPVAPPAAVAAVAGGARMPCAELVREPGCGCCSVCARLEGEACGVYTPRCGQGLRCYPH :::.. ::::::::::::: .:: ::. ::.:: :::.:::: : CCDS55 PPPAV---------------CAELVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPS 60 70 80 90 120 130 140 150 160 pF1KE4 PGSELPLQALVMGEGTC------EKRRDAEYGASPE--QVADNGDDHSEGGLVENHVDST : :::::. :.: : . : : : ..... .:.: :.. :.:: CCDS55 PDEARPLQALLDGRGLCVNASAVSRLRAYLLPAPPAPGNASESEEDRSAGSVESPSVSST 100 110 120 130 140 150 170 180 190 200 210 220 pF1KE4 MNMLGGGGSAGRKPLKSGMKELAVFREKVTEQHRQMGKGGKHHLGLEE-PKKLRPPPART . .. .::.: : . . . .. ...: .. .. .. . CCDS55 HRV----SDPKFHPLHS--KIIIIKKGHAKDSQRYKVDYESQSTDTQNFSSESKRETEYG 160 170 180 190 200 210 230 240 250 260 270 280 pF1KE4 PCQQELDQVLERISTMRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSLNGQRGECWC ::..:....:.... . . . :: .:::::::.:.:. :::. : . .:: ::: CCDS55 PCRREMEDTLNHLKFLNVLSPRG-------VHIPNCDKKGFYKKKQCRPSKGRKRGFCWC 220 230 240 250 260 290 300 310 320 pF1KE4 VNPNTGKLIQGAPTIRGDPECHLFYNEQQEARGVHTQRMQ :. . :. . : : .: . : . CCDS55 VD-KYGQPLPGYTT-KGKEDVHCYSMQSK 270 280 290 >>CCDS34632.1 IGFBP3 gene_id:3486|Hs108|chr7 (297 aa) initn: 542 init1: 303 opt: 456 Z-score: 387.6 bits: 79.9 E(32554): 2.9e-15 Smith-Waterman score: 527; 32.6% identity (56.5% similar) in 310 aa overlap (21-312:13-292) 10 20 30 40 50 pF1KE4 MLPRVGCPALPLPPPPLLPLLPLLLLLLG---ASGGGGGARAEVLFRCPPCTPERLAACG : ::.:: : : .:...: . :: :: . :: :. CCDS34 MQRARPTLWAAALTLLVLLRGPPVARAGASSAGLGPVVRCEPCDARALAQCA 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 PPPVAPPAAVAAVAGGARMPCAELVREPGCGCCSVCARLEGEACGVYTPRCGQGLRCYPH :::.. ::::::::::::: .:: ::. ::.:: :::.:::: : CCDS34 PPPAV---------------CAELVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPS 60 70 80 90 120 130 140 150 160 pF1KE4 PGSELPLQALVMGEGTC------EKRRDAEYGASPE--------QVADNGDDHSEGGLVE : :::::. :.: : . : : : ..... .:.: :.. CCDS34 PDEARPLQALLDGRGLCVNASAVSRLRAYLLPAPPAPGEPPAPGNASESEEDRSAGSVES 100 110 120 130 140 150 170 180 190 200 210 220 pF1KE4 NHVDSTMNMLGGGGSAGRKPLKSGMKELAVFREKVTEQHRQMGKGGKHHLGLEE-PKKLR :.:: . .. .::.: : . . . .. ...: .. .. .. . CCDS34 PSVSSTHRV----SDPKFHPLHS--KIIIIKKGHAKDSQRYKVDYESQSTDTQNFSSESK 160 170 180 190 200 210 230 240 250 260 270 280 pF1KE4 PPPARTPCQQELDQVLERISTMRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSLNGQ ::..:....:.... . . . :: .:::::::.:.:. :::. : . . CCDS34 RETEYGPCRREMEDTLNHLKFLNVLSPRG-------VHIPNCDKKGFYKKKQCRPSKGRK 220 230 240 250 260 290 300 310 320 pF1KE4 RGECWCVNPNTGKLIQGAPTIRGDPECHLFYNEQQEARGVHTQRMQ :: ::::. . :. . : : .: . : . CCDS34 RGFCWCVD-KYGQPLPGYTT-KGKEDVHCYSMQSK 270 280 290 328 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:09:30 2016 done: Sat Nov 5 23:09:31 2016 Total Scan time: 2.860 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]