FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1388, 517 aa 1>>>pF1KE1388 517 - 517 aa - 517 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4752+/-0.000434; mu= 17.1456+/- 0.027 mean_var=65.3413+/-13.346, 0's: 0 Z-trim(109.8): 21 B-trim: 20 in 1/52 Lambda= 0.158665 statistics sampled from 18061 (18080) to 18061 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.577), E-opt: 0.2 (0.212), width: 16 Scan time: 6.910 The best scores are: opt bits E(85289) NP_002694 (OMIM: 172450) amidophosphoribosyltransf ( 517) 3445 797.9 0 XP_011532689 (OMIM: 172450) PREDICTED: amidophosph ( 436) 2842 659.9 4.4e-189 XP_006715005 (OMIM: 603865) PREDICTED: glutamine-- ( 628) 200 55.2 6.9e-07 NP_005101 (OMIM: 603865) glutamine--fructose-6-pho ( 682) 200 55.2 7.4e-07 XP_016859291 (OMIM: 138292,608931,610542) PREDICTE ( 706) 157 45.3 0.0007 XP_016859290 (OMIM: 138292,608931,610542) PREDICTE ( 724) 148 43.3 0.003 >>NP_002694 (OMIM: 172450) amidophosphoribosyltransferas (517 aa) initn: 3445 init1: 3445 opt: 3445 Z-score: 4260.4 bits: 797.9 E(85289): 0 Smith-Waterman score: 3445; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517) 10 20 30 40 50 60 pF1KE1 MELEELGIREECGVFGCIASGEWPTQLDVPHVITLGLVGLQHRGQESAGIVTSDGSSVPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MELEELGIREECGVFGCIASGEWPTQLDVPHVITLGLVGLQHRGQESAGIVTSDGSSVPT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 FKSHKGMGLVNHVFTEDNLKKLYVSNLGIGHTRYATTGKCELENCQPFVVETLHGKIAVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 FKSHKGMGLVNHVFTEDNLKKLYVSNLGIGHTRYATTGKCELENCQPFVVETLHGKIAVA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 HNGELVNAARLRKKLLRHGIGLSTSSDSEMITQLLAYTPPQEQDDTPDWVARIKNLMKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 HNGELVNAARLRKKLLRHGIGLSTSSDSEMITQLLAYTPPQEQDDTPDWVARIKNLMKEA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 PTAYSLLIMHRDVIYAVRDPYGNRPLCIGRLIPVSDINDKEKKTSETEGWVVSSESCSFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 PTAYSLLIMHRDVIYAVRDPYGNRPLCIGRLIPVSDINDKEKKTSETEGWVVSSESCSFL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SIGARYYREVLPGEIVEISRHNVQTLDIISRSEGNPVAFCIFEYVYFARPDSMFEDQMVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 SIGARYYREVLPGEIVEISRHNVQTLDIISRSEGNPVAFCIFEYVYFARPDSMFEDQMVY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 TVRYRCGQQLAIEAPVDADLVSTVPESATPAALAYAGKCGLPYVEVLCKNRYVGRTFIQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 TVRYRCGQQLAIEAPVDADLVSTVPESATPAALAYAGKCGLPYVEVLCKNRYVGRTFIQP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 NMRLRQLGVAKKFGVLSDNFKGKRIVLVDDSIVRGNTISPIIKLLKESGAKEVHIRVASP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 NMRLRQLGVAKKFGVLSDNFKGKRIVLVDDSIVRGNTISPIIKLLKESGAKEVHIRVASP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 PIKYPCFMGINIPTKEELIANKPEFDHLAEYLGANSVVYLSVEGLVSSVQEGIKFKKQKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 PIKYPCFMGINIPTKEELIANKPEFDHLAEYLGANSVVYLSVEGLVSSVQEGIKFKKQKE 430 440 450 460 470 480 490 500 510 pF1KE1 KKHDIMIQENGNGLECFEKSGHCTACLTGKYPVELEW ::::::::::::::::::::::::::::::::::::: NP_002 KKHDIMIQENGNGLECFEKSGHCTACLTGKYPVELEW 490 500 510 >>XP_011532689 (OMIM: 172450) PREDICTED: amidophosphorib (436 aa) initn: 2842 init1: 2842 opt: 2842 Z-score: 3515.6 bits: 659.9 E(85289): 4.4e-189 Smith-Waterman score: 2842; 100.0% identity (100.0% similar) in 427 aa overlap (91-517:10-436) 70 80 90 100 110 120 pF1KE1 FKSHKGMGLVNHVFTEDNLKKLYVSNLGIGHTRYATTGKCELENCQPFVVETLHGKIAVA :::::::::::::::::::::::::::::: XP_011 MGVRCQHSNHTRYATTGKCELENCQPFVVETLHGKIAVA 10 20 30 130 140 150 160 170 180 pF1KE1 HNGELVNAARLRKKLLRHGIGLSTSSDSEMITQLLAYTPPQEQDDTPDWVARIKNLMKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 HNGELVNAARLRKKLLRHGIGLSTSSDSEMITQLLAYTPPQEQDDTPDWVARIKNLMKEA 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE1 PTAYSLLIMHRDVIYAVRDPYGNRPLCIGRLIPVSDINDKEKKTSETEGWVVSSESCSFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PTAYSLLIMHRDVIYAVRDPYGNRPLCIGRLIPVSDINDKEKKTSETEGWVVSSESCSFL 100 110 120 130 140 150 250 260 270 280 290 300 pF1KE1 SIGARYYREVLPGEIVEISRHNVQTLDIISRSEGNPVAFCIFEYVYFARPDSMFEDQMVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SIGARYYREVLPGEIVEISRHNVQTLDIISRSEGNPVAFCIFEYVYFARPDSMFEDQMVY 160 170 180 190 200 210 310 320 330 340 350 360 pF1KE1 TVRYRCGQQLAIEAPVDADLVSTVPESATPAALAYAGKCGLPYVEVLCKNRYVGRTFIQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TVRYRCGQQLAIEAPVDADLVSTVPESATPAALAYAGKCGLPYVEVLCKNRYVGRTFIQP 220 230 240 250 260 270 370 380 390 400 410 420 pF1KE1 NMRLRQLGVAKKFGVLSDNFKGKRIVLVDDSIVRGNTISPIIKLLKESGAKEVHIRVASP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NMRLRQLGVAKKFGVLSDNFKGKRIVLVDDSIVRGNTISPIIKLLKESGAKEVHIRVASP 280 290 300 310 320 330 430 440 450 460 470 480 pF1KE1 PIKYPCFMGINIPTKEELIANKPEFDHLAEYLGANSVVYLSVEGLVSSVQEGIKFKKQKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PIKYPCFMGINIPTKEELIANKPEFDHLAEYLGANSVVYLSVEGLVSSVQEGIKFKKQKE 340 350 360 370 380 390 490 500 510 pF1KE1 KKHDIMIQENGNGLECFEKSGHCTACLTGKYPVELEW ::::::::::::::::::::::::::::::::::::: XP_011 KKHDIMIQENGNGLECFEKSGHCTACLTGKYPVELEW 400 410 420 430 >>XP_006715005 (OMIM: 603865) PREDICTED: glutamine--fruc (628 aa) initn: 207 init1: 99 opt: 200 Z-score: 244.7 bits: 55.2 E(85289): 6.9e-07 Smith-Waterman score: 209; 27.0% identity (58.3% similar) in 211 aa overlap (12-209:2-207) 10 20 30 40 50 60 pF1KE1 MELEELGIREECGVFGCIASGEWPTQLDVPHVITLGLVGLQHRGQESAGIVTSDGSSVPT ::.:. . :. .. ... :: :..:: .:::.. ::.. . XP_006 MCGIFAYMNYRVPRTRKEIFETLIKGLQRLEYRGYDSAGVAI-DGNNHEV 10 20 30 40 70 80 90 100 110 pF1KE1 FKSH----KGMGLVN----HVFTED--NLKKLYVSNLGIGHTRYATTGKCELENCQPFVV . : : : :. ... .: .:: . ...::.:::.:: : : .: XP_006 KERHIQLVKKRGKVKALDEELYKQDSMDLKVEFETHFGIAHTRWATHGVPSAVNSHPQRS 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 ETLHGKIAVAHNGELVNAARLRKKLLRHGIGLSTSSDSEMITQLLAYTPPQEQDDTPDWV . ....: ::: ..: ::: : .: . . .:.: :..:. :. ... . . XP_006 DK-GNEFVVIHNGIITNYKDLRKFLESKGYEFESETDTETIAKLIKYVFDNRETEDITFS 110 120 130 140 150 160 180 190 200 210 220 pF1KE1 ARIKNLMKEAPTAYSLLIMHRDVIY---AVRDPYGNRPLCIGRLIPVSDINDKEKKTSET . .. .... :..:.. ..: : :: :. :: :: XP_006 TLVERVIQQLEGAFALVF--KSVHYPGEAVATRRGS-PLLIGVRSKYKLSTEQIPILYRT 170 180 190 200 210 220 230 240 250 260 270 280 pF1KE1 EGWVVSSESCSFLSIGARYYREVLPGEIVEISRHNVQTLDIISRSEGNPVAFCIFEYVYF XP_006 CTLENVKNICKTRMKRLDSSACLHAVGDKAVEFFFASDASAIIEHTNRVIFLEDDDIAAV 230 240 250 260 270 280 >>NP_005101 (OMIM: 603865) glutamine--fructose-6-phospha (682 aa) initn: 207 init1: 99 opt: 200 Z-score: 244.1 bits: 55.2 E(85289): 7.4e-07 Smith-Waterman score: 209; 27.0% identity (58.3% similar) in 211 aa overlap (12-209:2-207) 10 20 30 40 50 60 pF1KE1 MELEELGIREECGVFGCIASGEWPTQLDVPHVITLGLVGLQHRGQESAGIVTSDGSSVPT ::.:. . :. .. ... :: :..:: .:::.. ::.. . NP_005 MCGIFAYMNYRVPRTRKEIFETLIKGLQRLEYRGYDSAGVAI-DGNNHEV 10 20 30 40 70 80 90 100 110 pF1KE1 FKSH----KGMGLVN----HVFTED--NLKKLYVSNLGIGHTRYATTGKCELENCQPFVV . : : : :. ... .: .:: . ...::.:::.:: : : .: NP_005 KERHIQLVKKRGKVKALDEELYKQDSMDLKVEFETHFGIAHTRWATHGVPSAVNSHPQRS 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 ETLHGKIAVAHNGELVNAARLRKKLLRHGIGLSTSSDSEMITQLLAYTPPQEQDDTPDWV . ....: ::: ..: ::: : .: . . .:.: :..:. :. ... . . NP_005 DK-GNEFVVIHNGIITNYKDLRKFLESKGYEFESETDTETIAKLIKYVFDNRETEDITFS 110 120 130 140 150 160 180 190 200 210 220 pF1KE1 ARIKNLMKEAPTAYSLLIMHRDVIY---AVRDPYGNRPLCIGRLIPVSDINDKEKKTSET . .. .... :..:.. ..: : :: :. :: :: NP_005 TLVERVIQQLEGAFALVF--KSVHYPGEAVATRRGS-PLLIGVRSKYKLSTEQIPILYRT 170 180 190 200 210 220 230 240 250 260 270 280 pF1KE1 EGWVVSSESCSFLSIGARYYREVLPGEIVEISRHNVQTLDIISRSEGNPVAFCIFEYVYF NP_005 CTLENVKNICKTRMKRLDSSACLHAVGDKAVEFFFASDASAIIEHTNRVIFLEDDDIAAV 230 240 250 260 270 280 >>XP_016859291 (OMIM: 138292,608931,610542) PREDICTED: g (706 aa) initn: 105 init1: 65 opt: 157 Z-score: 190.7 bits: 45.3 E(85289): 0.0007 Smith-Waterman score: 181; 25.8% identity (55.2% similar) in 252 aa overlap (13-239:28-273) 10 20 30 40 pF1KE1 MELEELGIREECGVFGCIASGEWPTQLDVPHVITLGLVGLQHRGQ :.:. . :. .. ... :: :..:: XP_016 MTKIRELPSRNCCLIRGKKMNAHATASGIFAYLNYHVPRTRREILETLIKGLQRLEYRGY 10 20 30 40 50 60 50 60 70 80 90 pF1KE1 ESAGIVTSDGSSVPTFKSH-------KGMGLVN------HVFTEDNLKKLYVSNLGIGHT .::: : ::.. .... : : :. : . .: . .:::.:: XP_016 DSAG-VGFDGGNDKDWEANACKIQLIKKKGKVKALDEEVHKQQDMDLDIEFDVHLGIAHT 70 80 90 100 110 100 110 120 130 140 150 pF1KE1 RYATTGKCELENCQPFVVETLHGKIAVAHNGELVNAARLRKKLLRHGIGLSTSSDSEMIT :.:: :. : .: . .... : ::: ..: :.: : .: . . .:.: :. XP_016 RWATHGEPSPVNSHPQRSDK-NNEFIVIHNGIITNYKDLKKFLESKGYDFESETDTETIA 120 130 140 150 160 170 160 170 180 190 200 pF1KE1 QLLAYTPPQEQDDTPDWVARIKNLMKEAPTAYSLLIMHRDVIY---AVRDPYGNRPLCIG .:. : ..... .... .. .... :..:.. ..: . :: :. :: :: XP_016 KLVKYMYDNRESQDTSFTTLVERVIQQLEGAFALVF--KSVHFPGQAVGTRRGS-PLLIG 180 190 200 210 220 230 210 220 230 240 250 260 pF1KE1 -----RL----IPVSDINDKEKKTSETEGWVVSSESCSFLSIGARYYREVLPGEIVEISR .: ::. . :.:: : . . : .: .: : XP_016 VRSEHKLSTDHIPILYRTGKDKKGSCNLSRV-DSTTCLFPVEEKAVEYYFASDASAVIEH 240 250 260 270 280 290 270 280 290 300 310 320 pF1KE1 HNVQTLDIISRSEGNPVAFCIFEYVYFARPDSMFEDQMVYTVRYRCGQQLAIEAPVDADL XP_016 TNRVIFLEDDDVAAVVDGRLSIHRIKRTAGDHPGRAVQTLQMELQQIMKGNFSSFMQKEI 300 310 320 330 340 350 >>XP_016859290 (OMIM: 138292,608931,610542) PREDICTED: g (724 aa) initn: 105 init1: 65 opt: 148 Z-score: 179.4 bits: 43.3 E(85289): 0.003 Smith-Waterman score: 172; 25.4% identity (56.3% similar) in 213 aa overlap (13-209:28-235) 10 20 30 40 pF1KE1 MELEELGIREECGVFGCIASGEWPTQLDVPHVITLGLVGLQHRGQ :.:. . :. .. ... :: :..:: XP_016 MTKIRELPSRNCCLIRGKKMNAHATASGIFAYLNYHVPRTRREILETLIKGLQRLEYRGY 10 20 30 40 50 60 50 60 70 80 90 pF1KE1 ESAGIVTSDGSSVPTFKSH-------KGMGLVN------HVFTEDNLKKLYVSNLGIGHT .::: : ::.. .... : : :. : . .: . .:::.:: XP_016 DSAG-VGFDGGNDKDWEANACKIQLIKKKGKVKALDEEVHKQQDMDLDIEFDVHLGIAHT 70 80 90 100 110 100 110 120 130 140 150 pF1KE1 RYATTGKCELENCQPFVVETLHGKIAVAHNGELVNAARLRKKLLRHGIGLSTSSDSEMIT :.:: :. : .: . .... : ::: ..: :.: : .: . . .:.: :. XP_016 RWATHGEPSPVNSHPQRSDK-NNEFIVIHNGIITNYKDLKKFLESKGYDFESETDTETIA 120 130 140 150 160 170 160 170 180 190 200 pF1KE1 QLLAYTPPQEQDDTPDWVARIKNLMKEAPTAYSLLIMHRDVIY---AVRDPYGNRPLCIG .:. : ..... .... .. .... :..:.. ..: . :: :. :: :: XP_016 KLVKYMYDNRESQDTSFTTLVERVIQQLEGAFALVF--KSVHFPGQAVGTRRGS-PLLIG 180 190 200 210 220 230 210 220 230 240 250 260 pF1KE1 RLIPVSDINDKEKKTSETEGWVVSSESCSFLSIGARYYREVLPGEIVEISRHNVQTLDII XP_016 VRSEHKLSTDHIPILYRTARTQIGSKFTRWGSQGERGKDKKGSCNLSRVDSTTCLFPVEE 240 250 260 270 280 290 517 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:30:29 2016 done: Mon Nov 7 02:30:30 2016 Total Scan time: 6.910 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]