FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1388, 517 aa 1>>>pF1KE1388 517 - 517 aa - 517 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5827+/-0.00105; mu= 16.2085+/- 0.063 mean_var=61.6511+/-12.245, 0's: 0 Z-trim(102.8): 26 B-trim: 3 in 1/48 Lambda= 0.163344 statistics sampled from 7086 (7092) to 7086 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.589), E-opt: 0.2 (0.218), width: 16 Scan time: 2.190 The best scores are: opt bits E(32554) CCDS3505.1 PPAT gene_id:5471|Hs108|chr4 ( 517) 3445 820.9 0 >>CCDS3505.1 PPAT gene_id:5471|Hs108|chr4 (517 aa) initn: 3445 init1: 3445 opt: 3445 Z-score: 4384.3 bits: 820.9 E(32554): 0 Smith-Waterman score: 3445; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517) 10 20 30 40 50 60 pF1KE1 MELEELGIREECGVFGCIASGEWPTQLDVPHVITLGLVGLQHRGQESAGIVTSDGSSVPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MELEELGIREECGVFGCIASGEWPTQLDVPHVITLGLVGLQHRGQESAGIVTSDGSSVPT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 FKSHKGMGLVNHVFTEDNLKKLYVSNLGIGHTRYATTGKCELENCQPFVVETLHGKIAVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 FKSHKGMGLVNHVFTEDNLKKLYVSNLGIGHTRYATTGKCELENCQPFVVETLHGKIAVA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 HNGELVNAARLRKKLLRHGIGLSTSSDSEMITQLLAYTPPQEQDDTPDWVARIKNLMKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 HNGELVNAARLRKKLLRHGIGLSTSSDSEMITQLLAYTPPQEQDDTPDWVARIKNLMKEA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 PTAYSLLIMHRDVIYAVRDPYGNRPLCIGRLIPVSDINDKEKKTSETEGWVVSSESCSFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 PTAYSLLIMHRDVIYAVRDPYGNRPLCIGRLIPVSDINDKEKKTSETEGWVVSSESCSFL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SIGARYYREVLPGEIVEISRHNVQTLDIISRSEGNPVAFCIFEYVYFARPDSMFEDQMVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 SIGARYYREVLPGEIVEISRHNVQTLDIISRSEGNPVAFCIFEYVYFARPDSMFEDQMVY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 TVRYRCGQQLAIEAPVDADLVSTVPESATPAALAYAGKCGLPYVEVLCKNRYVGRTFIQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 TVRYRCGQQLAIEAPVDADLVSTVPESATPAALAYAGKCGLPYVEVLCKNRYVGRTFIQP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 NMRLRQLGVAKKFGVLSDNFKGKRIVLVDDSIVRGNTISPIIKLLKESGAKEVHIRVASP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 NMRLRQLGVAKKFGVLSDNFKGKRIVLVDDSIVRGNTISPIIKLLKESGAKEVHIRVASP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 PIKYPCFMGINIPTKEELIANKPEFDHLAEYLGANSVVYLSVEGLVSSVQEGIKFKKQKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 PIKYPCFMGINIPTKEELIANKPEFDHLAEYLGANSVVYLSVEGLVSSVQEGIKFKKQKE 430 440 450 460 470 480 490 500 510 pF1KE1 KKHDIMIQENGNGLECFEKSGHCTACLTGKYPVELEW ::::::::::::::::::::::::::::::::::::: CCDS35 KKHDIMIQENGNGLECFEKSGHCTACLTGKYPVELEW 490 500 510 517 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:30:28 2016 done: Mon Nov 7 02:30:28 2016 Total Scan time: 2.190 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]