FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5114, 118 aa 1>>>pF1KE5114 118 - 118 aa - 118 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7968+/-0.000249; mu= 14.5108+/- 0.016 mean_var=75.5303+/-15.253, 0's: 0 Z-trim(122.6): 10 B-trim: 747 in 2/55 Lambda= 0.147575 statistics sampled from 40960 (40970) to 40960 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.828), E-opt: 0.2 (0.48), width: 16 Scan time: 4.240 The best scores are: opt bits E(85289) NP_113640 (OMIM: 614547) RNMT-activating mini prot ( 118) 889 197.0 6e-51 >>NP_113640 (OMIM: 614547) RNMT-activating mini protein (118 aa) initn: 889 init1: 889 opt: 889 Z-score: 1035.6 bits: 197.0 E(85289): 6e-51 Smith-Waterman score: 889; 100.0% identity (100.0% similar) in 118 aa overlap (1-118:1-118) 10 20 30 40 50 60 pF1KE5 MTDTAEAVPKFEEMFASRFTENDKEYQEYLKRPPESPPIVEEWNSRAGGNQRNRGNRLQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_113 MTDTAEAVPKFEEMFASRFTENDKEYQEYLKRPPESPPIVEEWNSRAGGNQRNRGNRLQD 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 NRQFRGRDNRWGWPSDNRSNQWHGRSWGNNYPQHRQEPYYPQQYGHYGYNQRPPYGYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_113 NRQFRGRDNRWGWPSDNRSNQWHGRSWGNNYPQHRQEPYYPQQYGHYGYNQRPPYGYY 70 80 90 100 110 118 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 21:28:29 2016 done: Mon Nov 7 21:28:30 2016 Total Scan time: 4.240 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]