FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE4438, 455 aa
  1>>>pF1KE4438 455 - 455 aa - 455 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.7989+/-0.000374; mu= 20.4385+/- 0.023
 mean_var=69.0533+/-13.909, 0's: 0 Z-trim(113.1): 17  B-trim: 34 in 2/52
 Lambda= 0.154341
 statistics sampled from 22333 (22349) to 22333 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.262), width:  16
 Scan time:  7.920

The best scores are:                                      opt bits E(85289)
NP_000111 (OMIM: 132810,189800,607748) epoxide hyd ( 455) 3130 706.3 4.3e-203
NP_001278092 (OMIM: 132810,189800,607748) epoxide  ( 455) 3130 706.3 4.3e-203
NP_001129490 (OMIM: 132810,189800,607748) epoxide  ( 455) 3130 706.3 4.3e-203


>>NP_000111 (OMIM: 132810,189800,607748) epoxide hydrola  (455 aa)
 initn: 3130 init1: 3130 opt: 3130  Z-score: 3767.1  bits: 706.3 E(85289): 4.3e-203
Smith-Waterman score: 3130; 100.0% identity (100.0% similar) in 455 aa overlap (1-455:1-455)

               10        20        30        40        50        60
pF1KE4 MWLEILLTSVLGFAIYWFISRDKEETLPLEDGWWGPGTRSAAREDDSIRPFKVETSDEEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MWLEILLTSVLGFAIYWFISRDKEETLPLEDGWWGPGTRSAAREDDSIRPFKVETSDEEI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 HDLHQRIDKFRFTPPLEDSCFHYGFNSNYLKKVISYWRNEFDWKKQVEILNRYPHFKTKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 HDLHQRIDKFRFTPPLEDSCFHYGFNSNYLKKVISYWRNEFDWKKQVEILNRYPHFKTKI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 EGLDIHFIHVKPPQLPAGHTPKPLLMVHGWPGSFYEFYKIIPLLTDPKNHGLSDEHVFEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 EGLDIHFIHVKPPQLPAGHTPKPLLMVHGWPGSFYEFYKIIPLLTDPKNHGLSDEHVFEV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYIQGGDWGSLICTNMAQLVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYIQGGDWGSLICTNMAQLVP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 SHVKGLHLNMALVLSNFSTLTLLLGQRFGRFLGLTERDVELLYPVKEKVFYSLMRESGYM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SHVKGLHLNMALVLSNFSTLTLLLGQRFGRFLGLTERDVELLYPVKEKVFYSLMRESGYM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 HIQCTKPDTVGSALNDSPVGLAAYILEKFSTWTNTEFRYLEDGGLERKFSLDDLLTNVML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 HIQCTKPDTVGSALNDSPVGLAAYILEKFSTWTNTEFRYLEDGGLERKFSLDDLLTNVML
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE4 YWTTGTIISSQRFYKENLGQGWMTQKHERMKVYVPTGFSAFPFELLHTPEKWVRFKYPKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 YWTTGTIISSQRFYKENLGQGWMTQKHERMKVYVPTGFSAFPFELLHTPEKWVRFKYPKL
              370       380       390       400       410       420

              430       440       450     
pF1KE4 ISYSYMVRGGHFAAFEEPELLAQDIRKFLSVLERQ
       :::::::::::::::::::::::::::::::::::
NP_000 ISYSYMVRGGHFAAFEEPELLAQDIRKFLSVLERQ
              430       440       450     

>>NP_001278092 (OMIM: 132810,189800,607748) epoxide hydr  (455 aa)
 initn: 3130 init1: 3130 opt: 3130  Z-score: 3767.1  bits: 706.3 E(85289): 4.3e-203
Smith-Waterman score: 3130; 100.0% identity (100.0% similar) in 455 aa overlap (1-455:1-455)

               10        20        30        40        50        60
pF1KE4 MWLEILLTSVLGFAIYWFISRDKEETLPLEDGWWGPGTRSAAREDDSIRPFKVETSDEEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MWLEILLTSVLGFAIYWFISRDKEETLPLEDGWWGPGTRSAAREDDSIRPFKVETSDEEI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 HDLHQRIDKFRFTPPLEDSCFHYGFNSNYLKKVISYWRNEFDWKKQVEILNRYPHFKTKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HDLHQRIDKFRFTPPLEDSCFHYGFNSNYLKKVISYWRNEFDWKKQVEILNRYPHFKTKI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 EGLDIHFIHVKPPQLPAGHTPKPLLMVHGWPGSFYEFYKIIPLLTDPKNHGLSDEHVFEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGLDIHFIHVKPPQLPAGHTPKPLLMVHGWPGSFYEFYKIIPLLTDPKNHGLSDEHVFEV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYIQGGDWGSLICTNMAQLVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYIQGGDWGSLICTNMAQLVP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 SHVKGLHLNMALVLSNFSTLTLLLGQRFGRFLGLTERDVELLYPVKEKVFYSLMRESGYM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHVKGLHLNMALVLSNFSTLTLLLGQRFGRFLGLTERDVELLYPVKEKVFYSLMRESGYM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 HIQCTKPDTVGSALNDSPVGLAAYILEKFSTWTNTEFRYLEDGGLERKFSLDDLLTNVML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HIQCTKPDTVGSALNDSPVGLAAYILEKFSTWTNTEFRYLEDGGLERKFSLDDLLTNVML
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE4 YWTTGTIISSQRFYKENLGQGWMTQKHERMKVYVPTGFSAFPFELLHTPEKWVRFKYPKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YWTTGTIISSQRFYKENLGQGWMTQKHERMKVYVPTGFSAFPFELLHTPEKWVRFKYPKL
              370       380       390       400       410       420

              430       440       450     
pF1KE4 ISYSYMVRGGHFAAFEEPELLAQDIRKFLSVLERQ
       :::::::::::::::::::::::::::::::::::
NP_001 ISYSYMVRGGHFAAFEEPELLAQDIRKFLSVLERQ
              430       440       450     

>>NP_001129490 (OMIM: 132810,189800,607748) epoxide hydr  (455 aa)
 initn: 3130 init1: 3130 opt: 3130  Z-score: 3767.1  bits: 706.3 E(85289): 4.3e-203
Smith-Waterman score: 3130; 100.0% identity (100.0% similar) in 455 aa overlap (1-455:1-455)

               10        20        30        40        50        60
pF1KE4 MWLEILLTSVLGFAIYWFISRDKEETLPLEDGWWGPGTRSAAREDDSIRPFKVETSDEEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MWLEILLTSVLGFAIYWFISRDKEETLPLEDGWWGPGTRSAAREDDSIRPFKVETSDEEI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 HDLHQRIDKFRFTPPLEDSCFHYGFNSNYLKKVISYWRNEFDWKKQVEILNRYPHFKTKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HDLHQRIDKFRFTPPLEDSCFHYGFNSNYLKKVISYWRNEFDWKKQVEILNRYPHFKTKI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 EGLDIHFIHVKPPQLPAGHTPKPLLMVHGWPGSFYEFYKIIPLLTDPKNHGLSDEHVFEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGLDIHFIHVKPPQLPAGHTPKPLLMVHGWPGSFYEFYKIIPLLTDPKNHGLSDEHVFEV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYIQGGDWGSLICTNMAQLVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ICPSIPGYGFSEASSKKGFNSVATARIFYKLMLRLGFQEFYIQGGDWGSLICTNMAQLVP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 SHVKGLHLNMALVLSNFSTLTLLLGQRFGRFLGLTERDVELLYPVKEKVFYSLMRESGYM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHVKGLHLNMALVLSNFSTLTLLLGQRFGRFLGLTERDVELLYPVKEKVFYSLMRESGYM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 HIQCTKPDTVGSALNDSPVGLAAYILEKFSTWTNTEFRYLEDGGLERKFSLDDLLTNVML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HIQCTKPDTVGSALNDSPVGLAAYILEKFSTWTNTEFRYLEDGGLERKFSLDDLLTNVML
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE4 YWTTGTIISSQRFYKENLGQGWMTQKHERMKVYVPTGFSAFPFELLHTPEKWVRFKYPKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YWTTGTIISSQRFYKENLGQGWMTQKHERMKVYVPTGFSAFPFELLHTPEKWVRFKYPKL
              370       380       390       400       410       420

              430       440       450     
pF1KE4 ISYSYMVRGGHFAAFEEPELLAQDIRKFLSVLERQ
       :::::::::::::::::::::::::::::::::::
NP_001 ISYSYMVRGGHFAAFEEPELLAQDIRKFLSVLERQ
              430       440       450     




455 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 01:07:49 2016 done: Sun Nov  6 01:07:50 2016
 Total Scan time:  7.920 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]