FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6153, 141 aa 1>>>pF1KE6153 141 - 141 aa - 141 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4654+/-0.000322; mu= 10.2107+/- 0.020 mean_var=57.9653+/-11.604, 0's: 0 Z-trim(115.6): 11 B-trim: 745 in 1/50 Lambda= 0.168457 statistics sampled from 26215 (26217) to 26215 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.712), E-opt: 0.2 (0.307), width: 16 Scan time: 3.540 The best scores are: opt bits E(85289) NP_057016 (OMIM: 601952,613386) proteasome maturat ( 141) 917 230.6 6.4e-61 >>NP_057016 (OMIM: 601952,613386) proteasome maturation (141 aa) initn: 917 init1: 917 opt: 917 Z-score: 1214.7 bits: 230.6 E(85289): 6.4e-61 Smith-Waterman score: 917; 100.0% identity (100.0% similar) in 141 aa overlap (1-141:1-141) 10 20 30 40 50 60 pF1KE6 MNARGLGSELKDSIPVTELSASGPFESHDLLRKGFSCVKNELLPSHPLELSEKNFQLNQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 MNARGLGSELKDSIPVTELSASGPFESHDLLRKGFSCVKNELLPSHPLELSEKNFQLNQD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 KMNFSTLRNIQGLFAPLKLQMEFKAVQQVQRLPFLSSSNLSLDVLRGNDETIGFEDILND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 KMNFSTLRNIQGLFAPLKLQMEFKAVQQVQRLPFLSSSNLSLDVLRGNDETIGFEDILND 70 80 90 100 110 120 130 140 pF1KE6 PSQSEVMGEPHLMVEYKLGLL ::::::::::::::::::::: NP_057 PSQSEVMGEPHLMVEYKLGLL 130 140 141 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:54:54 2016 done: Tue Nov 8 09:54:54 2016 Total Scan time: 3.540 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]