FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6153, 141 aa 1>>>pF1KE6153 141 - 141 aa - 141 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3310+/-0.000722; mu= 10.8859+/- 0.044 mean_var=58.8713+/-11.480, 0's: 0 Z-trim(108.5): 13 B-trim: 7 in 1/49 Lambda= 0.167156 statistics sampled from 10241 (10244) to 10241 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.721), E-opt: 0.2 (0.315), width: 16 Scan time: 1.550 The best scores are: opt bits E(32554) CCDS9331.1 POMP gene_id:51371|Hs108|chr13 ( 141) 917 228.9 7.9e-61 >>CCDS9331.1 POMP gene_id:51371|Hs108|chr13 (141 aa) initn: 917 init1: 917 opt: 917 Z-score: 1205.6 bits: 228.9 E(32554): 7.9e-61 Smith-Waterman score: 917; 100.0% identity (100.0% similar) in 141 aa overlap (1-141:1-141) 10 20 30 40 50 60 pF1KE6 MNARGLGSELKDSIPVTELSASGPFESHDLLRKGFSCVKNELLPSHPLELSEKNFQLNQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS93 MNARGLGSELKDSIPVTELSASGPFESHDLLRKGFSCVKNELLPSHPLELSEKNFQLNQD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 KMNFSTLRNIQGLFAPLKLQMEFKAVQQVQRLPFLSSSNLSLDVLRGNDETIGFEDILND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS93 KMNFSTLRNIQGLFAPLKLQMEFKAVQQVQRLPFLSSSNLSLDVLRGNDETIGFEDILND 70 80 90 100 110 120 130 140 pF1KE6 PSQSEVMGEPHLMVEYKLGLL ::::::::::::::::::::: CCDS93 PSQSEVMGEPHLMVEYKLGLL 130 140 141 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:54:53 2016 done: Tue Nov 8 09:54:54 2016 Total Scan time: 1.550 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]