FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1555, 153 aa 1>>>pF1KE1555 153 - 153 aa - 153 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7106+/-0.000321; mu= 15.3995+/- 0.020 mean_var=59.0766+/-12.226, 0's: 0 Z-trim(115.7): 52 B-trim: 1586 in 1/48 Lambda= 0.166866 statistics sampled from 26342 (26395) to 26342 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.309), width: 16 Scan time: 4.140 The best scores are: opt bits E(85289) NP_005425 (OMIM: 602022) MAL-like protein [Homo sa ( 153) 1003 249.1 2.1e-66 XP_011510111 (OMIM: 602022) PREDICTED: MAL-like pr ( 149) 771 193.2 1.3e-49 NP_002362 (OMIM: 188860) myelin and lymphocyte pro ( 153) 396 103.0 2e-22 NP_443118 (OMIM: 609684) protein MAL2 [Homo sapien ( 176) 293 78.2 6.6e-15 NP_071883 (OMIM: 188860) myelin and lymphocyte pro ( 111) 248 67.2 8.4e-12 NP_849199 (OMIM: 607891) CKLF-like MARVEL transmem ( 173) 232 63.5 1.7e-10 XP_011531718 (OMIM: 607891) PREDICTED: CKLF-like M ( 196) 217 59.9 2.3e-09 XP_016861268 (OMIM: 607891) PREDICTED: CKLF-like M ( 130) 212 58.6 3.8e-09 NP_057077 (OMIM: 600340) plasmolipin [Homo sapiens ( 182) 201 56.1 3.1e-08 NP_071884 (OMIM: 188860) myelin and lymphocyte pro ( 97) 158 45.5 2.5e-05 XP_016861269 (OMIM: 607891) PREDICTED: CKLF-like M ( 100) 139 41.0 0.00061 >>NP_005425 (OMIM: 602022) MAL-like protein [Homo sapien (153 aa) initn: 1003 init1: 1003 opt: 1003 Z-score: 1313.2 bits: 249.1 E(85289): 2.1e-66 Smith-Waterman score: 1003; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KE1 MASPDPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MASPDPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL 70 80 90 100 110 120 130 140 150 pF1KE1 LDPRIYYINSAASFFAFIATLLYILHAFSIYYH ::::::::::::::::::::::::::::::::: NP_005 LDPRIYYINSAASFFAFIATLLYILHAFSIYYH 130 140 150 >>XP_011510111 (OMIM: 602022) PREDICTED: MAL-like protei (149 aa) initn: 771 init1: 771 opt: 771 Z-score: 1011.5 bits: 193.2 E(85289): 1.3e-49 Smith-Waterman score: 771; 100.0% identity (100.0% similar) in 119 aa overlap (35-153:31-149) 10 20 30 40 50 60 pF1KE1 DPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSL :::::::::::::::::::::::::::::: XP_011 MEKLTEDSRKKKKGAGIFGKETRIQNTTKLLIFGFLVWTMVAATHIVYPLLQGWVMYVSL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPR 70 80 90 100 110 120 130 140 150 pF1KE1 IYYINSAASFFAFIATLLYILHAFSIYYH ::::::::::::::::::::::::::::: XP_011 IYYINSAASFFAFIATLLYILHAFSIYYH 130 140 >>NP_002362 (OMIM: 188860) myelin and lymphocyte protein (153 aa) initn: 393 init1: 393 opt: 396 Z-score: 523.5 bits: 103.0 E(85289): 2e-22 Smith-Waterman score: 396; 42.8% identity (73.8% similar) in 145 aa overlap (7-150:3-147) 10 20 30 40 50 60 pF1KE1 MASPDPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVM ::.. . : .::: ..: :.: .:. :.::: ::: .::.. . .::.::::: NP_002 MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVM 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL .::. :. . ... :..: . :: .::. :: :....:.::.::.. :::. . NP_002 FVSVFCFVATTTLIILYIIGAHGGETSWVTLDAAYHCTAALFYLSASVLEALATITMQDG 60 70 80 90 100 110 130 140 150 pF1KE1 LDPRIYYINSAASFFAFIATLLYILHA-FSIYYH . : :. : :: :..::::::..:: ::. NP_002 FTYRHYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS 120 130 140 150 >>NP_443118 (OMIM: 609684) protein MAL2 [Homo sapiens] (176 aa) initn: 262 init1: 197 opt: 293 Z-score: 388.6 bits: 78.2 E(85289): 6.6e-15 Smith-Waterman score: 337; 40.5% identity (66.0% similar) in 153 aa overlap (4-143:11-163) 10 20 30 40 50 pF1KE1 MASPDPPATSYAPSDV--PSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIV : ::.:. : : :.: .. : :: :..:: ::: .::.... NP_443 MSAGGASVPPPPNPAVSFPPPRVTLPAGPDILRTYSGAFVCLEILFGGLVWILVASSNVP 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 YPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFES-WRVLDSLYHGTTGILYMSAAVLQ ::::::::.::.:.:..::.:: .: :. .... : :: :: :. ..:..: .:. NP_443 LPLLQGWVMFVSVTAFFFSLLFLGMFLSGMVAQIDANWNFLDFAYHFTVFVFYFGAFLLE 70 80 90 100 110 120 120 130 140 150 pF1KE1 VHAT----------IVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH . :: :... ::. : :: :::.:::..: : NP_443 AAATSLHDLHCNTTITGQPLLSDNQYNINVAASIFAFMTTACYGCSLGLALRRWRP 130 140 150 160 170 >>NP_071883 (OMIM: 188860) myelin and lymphocyte protein (111 aa) initn: 291 init1: 239 opt: 248 Z-score: 332.9 bits: 67.2 E(85289): 8.4e-12 Smith-Waterman score: 248; 38.1% identity (69.5% similar) in 105 aa overlap (7-111:3-105) 10 20 30 40 50 60 pF1KE1 MASPDPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVM ::.. . : .::: ..: :.: .:. :.::: ::: .::.. . .::.::::: NP_071 MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVM 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL .::. :. . ... :..: . :: .: : .: .::. ::... NP_071 FVSVFCFVATTTLIILYIIGAHGGETSWVTLVFSYIAT--LLYVVHAVFSLIRWKSS 60 70 80 90 100 110 130 140 150 pF1KE1 LDPRIYYINSAASFFAFIATLLYILHAFSIYYH >>NP_849199 (OMIM: 607891) CKLF-like MARVEL transmembran (173 aa) initn: 190 init1: 132 opt: 232 Z-score: 309.4 bits: 63.5 E(85289): 1.7e-10 Smith-Waterman score: 232; 34.7% identity (68.5% similar) in 124 aa overlap (23-143:36-156) 10 20 30 40 50 pF1KE1 MASPDPPATSYAPSDVPSGVALFL-TIPFAFFLPELIFGFLVWTMVAATHIV :: :.: ... :...:.::::..:.:. NP_849 RARSHTVTTTASSFAENFSTSSSSFAYDREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYF 10 20 30 40 50 60 60 70 80 90 100 pF1KE1 YPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFES--WRVLDSLYHGTTGILYMSAAVL ::::.:.. ......::. :. : :. . : .. ..:.. .::.:::: NP_849 RVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAV- 70 80 90 100 110 120 110 120 130 140 150 pF1KE1 QVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH : :. :: . : . . .:.:::::..:. : NP_849 -VDASSVSPER-DSHNFNSWAASSFFAFLVTICYAGNTYFSFIAWRSRTIQ 130 140 150 160 170 >>XP_011531718 (OMIM: 607891) PREDICTED: CKLF-like MARVE (196 aa) initn: 186 init1: 128 opt: 217 Z-score: 289.1 bits: 59.9 E(85289): 2.3e-09 Smith-Waterman score: 217; 35.1% identity (68.5% similar) in 111 aa overlap (35-143:72-179) 10 20 30 40 50 60 pF1KE1 DPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSL :..:.::::..:.:. ::::.:.. XP_011 GFLIVAEILISLPITDPLHRSALSTTARDILVLGLLVWTLIAGTEYFRVPAFGWVMFVAV 50 60 70 80 90 100 70 80 90 100 110 120 pF1KE1 TSFLISLMFLLSYLFGFYKRFES--WRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLD ......::. :. : :. . : .. ..:.. .::.:::: : :. :: . : XP_011 FYWVLTVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAV--VDASSVSPER-D 110 120 130 140 150 130 140 150 pF1KE1 PRIYYINSAASFFAFIATLLYILHAFSIYYH . . .:.:::::..:. : XP_011 SHNFNSWAASSFFAFLVTICYAGNTYFSFIAWRSRTIQ 160 170 180 190 >>XP_016861268 (OMIM: 607891) PREDICTED: CKLF-like MARVE (130 aa) initn: 181 init1: 123 opt: 212 Z-score: 285.1 bits: 58.6 E(85289): 3.8e-09 Smith-Waterman score: 212; 34.5% identity (68.2% similar) in 110 aa overlap (36-143:7-113) 10 20 30 40 50 60 pF1KE1 PPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLT ..:.::::..:.:. ::::.:.. XP_016 MFRRIQVLGLLVWTLIAGTEYFRVPAFGWVMFVAVF 10 20 30 70 80 90 100 110 120 pF1KE1 SFLISLMFLLSYLFGFYKRFES--WRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDP ......::. :. : :. . : .. ..:.. .::.:::: : :. :: . : XP_016 YWVLTVFFLIIYITMTYTRIPQVPWTTVGLCFNGSAFVLYLSAAV--VDASSVSPER-DS 40 50 60 70 80 90 130 140 150 pF1KE1 RIYYINSAASFFAFIATLLYILHAFSIYYH . . .:.:::::..:. : XP_016 HNFNSWAASSFFAFLVTICYAGNTYFSFIAWRSRTIQ 100 110 120 130 >>NP_057077 (OMIM: 600340) plasmolipin [Homo sapiens] (182 aa) initn: 164 init1: 125 opt: 201 Z-score: 268.7 bits: 56.1 E(85289): 3.1e-08 Smith-Waterman score: 201; 30.2% identity (65.1% similar) in 126 aa overlap (29-151:39-162) 10 20 30 40 50 pF1KE1 MASPDPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAAT-HIVYPLLQG :..: .:..:.:::...: : . .:: : NP_057 STRTSSPAQGAEASVSALRPDLGFVRSRLGALMLLQLVLGLLVWALIADTPYHLYPAY-G 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 WVMYVSLTSFLISLMFLLSYLFGFYKRFE--SWRVLDSLYHGTTGILYMSAAVLQVHATI :::.:.. .:...... ::: .. .. : .. ... .. .::..: . :.. NP_057 WVMFVAVFLWLVTIVLFNLYLFQLHMKLYMVPWPLVLMIFNISATVLYITAFI-ACSAAV 70 80 90 100 110 120 120 130 140 150 pF1KE1 VSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH .: : : .:::::: .. . : . :: : NP_057 DLTSLRGTRPYNQRAAASFFACLVMIAYGVSAFFSYQAWRGVGSNAATSQMAGGYA 130 140 150 160 170 180 >>NP_071884 (OMIM: 188860) myelin and lymphocyte protein (97 aa) initn: 216 init1: 155 opt: 158 Z-score: 216.6 bits: 45.5 E(85289): 2.5e-05 Smith-Waterman score: 158; 45.9% identity (77.0% similar) in 61 aa overlap (91-150:31-91) 70 80 90 100 110 120 pF1KE1 YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL .:. :: :....:.::.::.. :::. . NP_071 MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFDAAYHCTAALFYLSASVLEALATITMQDG 10 20 30 40 50 60 130 140 150 pF1KE1 LDPRIYYINSAASFFAFIATLLYILHA-FSIYYH . : :. : :: :..::::::..:: ::. NP_071 FTYRHYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS 70 80 90 153 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:32:13 2016 done: Mon Nov 7 02:32:14 2016 Total Scan time: 4.140 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]