FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4489, 511 aa 1>>>pF1KE4489 511 - 511 aa - 511 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2797+/-0.000966; mu= 18.1884+/- 0.058 mean_var=59.8596+/-11.923, 0's: 0 Z-trim(102.9): 21 B-trim: 3 in 1/52 Lambda= 0.165770 statistics sampled from 7138 (7145) to 7138 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.585), E-opt: 0.2 (0.219), width: 16 Scan time: 3.070 The best scores are: opt bits E(32554) CCDS6014.1 ATP6V1B2 gene_id:526|Hs108|chr8 ( 511) 3354 810.9 0 CCDS1912.1 ATP6V1B1 gene_id:525|Hs108|chr2 ( 513) 2871 695.4 3.9e-200 CCDS58620.1 ATP5A1 gene_id:498|Hs108|chr18 ( 503) 387 101.3 2.6e-21 CCDS11927.1 ATP5A1 gene_id:498|Hs108|chr18 ( 553) 387 101.4 2.8e-21 CCDS8924.1 ATP5B gene_id:506|Hs108|chr12 ( 529) 368 96.8 6.4e-20 CCDS59315.1 ATP5A1 gene_id:498|Hs108|chr18 ( 531) 328 87.2 4.8e-17 CCDS2976.1 ATP6V1A gene_id:523|Hs108|chr3 ( 617) 305 81.8 2.5e-15 >>CCDS6014.1 ATP6V1B2 gene_id:526|Hs108|chr8 (511 aa) initn: 3354 init1: 3354 opt: 3354 Z-score: 4330.8 bits: 810.9 E(32554): 0 Smith-Waterman score: 3354; 100.0% identity (100.0% similar) in 511 aa overlap (1-511:1-511) 10 20 30 40 50 60 pF1KE4 MALRAMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGVNGPLVIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 MALRAMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGVNGPLVIL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDILR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 DHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDILR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 TPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 TPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 NSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNMET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 NSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNMET 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 ARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 ARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 ITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 ITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 QLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTVFETLDIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 QLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTVFETLDIG 430 440 450 460 470 480 490 500 510 pF1KE4 WQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH ::::::::::::::::::::::::::::::: CCDS60 WQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH 490 500 510 >>CCDS1912.1 ATP6V1B1 gene_id:525|Hs108|chr2 (513 aa) initn: 2870 init1: 2870 opt: 2871 Z-score: 3706.5 bits: 695.4 E(32554): 3.9e-200 Smith-Waterman score: 2871; 87.4% identity (96.5% similar) in 492 aa overlap (19-509:12-503) 10 20 30 40 50 pF1KE4 MALRAMRGIVNGAAPELPVPTGGPAVGA-REQALAVSRNYLSQPRLTYKTVSGVNGPLVI .: .. .:: ::. ::.:::...::.::.:: .::::::. CCDS19 MAMEIDSRPGGLPGSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVV 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 LDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDIL ::.::: .::::::.::::::.::::::::.:.::.::::::::::::.::.:::::::: CCDS19 LDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDIL 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 RTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDG :::::::::::::::::::::.::::.::::::: ::::::. ::::::::::::: :: CCDS19 RTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDV 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 MNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNME :::::::::::::::::::::::::::::::::::::: :.:: ..:::::::::::::: CCDS19 MNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNFAIVFAAMGVNME 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 TARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTD ::::::::::.::.: :::::::::::::::::::::::::::::::::::::::::::: CCDS19 TARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTD 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 MSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPND :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: CCDS19 MSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILTMPND 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE4 DITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVS :::::::::::.::::::::::::::::::::::::::::::::::::::::::::.::: CCDS19 DITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVS 360 370 380 390 400 410 420 430 440 450 460 470 pF1KE4 NQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTVFETLDI :::::::::::::::::::::::::::.::::::::::::.::: :::::::.:::.::. CCDS19 NQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDL 420 430 440 450 460 470 480 490 500 510 pF1KE4 GWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH ::.:::::::::::::::....::: :..: CCDS19 GWKLLRIFPKEMLKRIPQAVIDEFYSREGALQDLAPDTAL 480 490 500 510 >>CCDS58620.1 ATP5A1 gene_id:498|Hs108|chr18 (503 aa) initn: 357 init1: 135 opt: 387 Z-score: 496.1 bits: 101.3 E(32554): 2.6e-21 Smith-Waterman score: 392; 25.7% identity (57.2% similar) in 439 aa overlap (70-503:44-457) 40 50 60 70 80 90 pF1KE4 LSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVF :.:... .: : :. :.. ... : :: CCDS58 TSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SGLK--GMSLNLEPDNVGVVVF 20 30 40 50 60 100 110 120 130 140 150 pF1KE4 EGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID-RGPV-VLAEDFLDIMGQP :.. . . . :: :. .::.:..:::: .. :. :: .::. .. . . . CCDS58 -GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPG 70 80 90 100 110 120 160 170 180 190 200 210 pF1KE4 INPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKS : : :: .: .::::.:.:.. :.:::. :.. .. :: . : : :. CCDS58 IIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRF 130 140 150 160 170 180 220 230 240 250 260 270 pF1KE4 KDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR .: : ... . : ..:.: . :. . . . . .: . . :.: . . ..: CCDS58 NDGSDEKKKLYCI-YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPY 190 200 210 220 230 240 280 290 300 310 320 330 pF1KE4 LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE . . .:.. . ::.:.: :.:. : : :..: .. :::...:: .. . . : CCDS58 SGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 250 260 270 280 290 300 340 350 360 370 380 390 pF1KE4 RAGRVEGR--NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINV ::.... .::.: .:.. :.. :: . ::.:::... .: . : : ::: CCDS58 RAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV 310 320 330 340 350 360 400 410 420 430 440 450 pF1KE4 LPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEF :.:: .: . . .:.. . : ..: :. : : . .. . : . CCDS58 GLSVSR-----VGSAAQTRAMKQVAGTMKLELAQYREVAAF-AQFGSDLDAATQQLLSRG 370 380 390 400 410 460 470 480 490 500 510 pF1KE4 LQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH .. : .. :: : .. : . . . .: . : .. : ...: CCDS58 VRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGY----LDKLEPSKITKFENAFLSHVVSQ 420 430 440 450 460 CCDS58 HQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA 470 480 490 500 >>CCDS11927.1 ATP5A1 gene_id:498|Hs108|chr18 (553 aa) initn: 357 init1: 135 opt: 387 Z-score: 495.4 bits: 101.4 E(32554): 2.8e-21 Smith-Waterman score: 392; 25.7% identity (57.2% similar) in 439 aa overlap (70-503:94-507) 40 50 60 70 80 90 pF1KE4 LSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVF :.:... .: : :. :.. ... : :: CCDS11 TSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SGLK--GMSLNLEPDNVGVVVF 70 80 90 100 110 100 110 120 130 140 150 pF1KE4 EGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID-RGPV-VLAEDFLDIMGQP :.. . . . :: :. .::.:..:::: .. :. :: .::. .. . . . CCDS11 -GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPG 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE4 INPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKS : : :: .: .::::.:.:.. :.:::. :.. .. :: . : : :. CCDS11 IIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRF 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE4 KDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR .: : ... . : ..:.: . :. . . . . .: . . :.: . . ..: CCDS11 NDGSDEKKKLYCI-YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPY 240 250 260 270 280 290 280 290 300 310 320 330 pF1KE4 LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE . . .:.. . ::.:.: :.:. : : :..: .. :::...:: .. . . : CCDS11 SGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300 310 320 330 340 350 340 350 360 370 380 390 pF1KE4 RAGRVEGR--NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINV ::.... .::.: .:.. :.. :: . ::.:::... .: . : : ::: CCDS11 RAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV 360 370 380 390 400 410 400 410 420 430 440 450 pF1KE4 LPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEF :.:: .: . . .:.. . : ..: :. : : . .. . : . CCDS11 GLSVSR-----VGSAAQTRAMKQVAGTMKLELAQYREVAAF-AQFGSDLDAATQQLLSRG 420 430 440 450 460 460 470 480 490 500 510 pF1KE4 LQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH .. : .. :: : .. : . . . .: . : .. : ...: CCDS11 VRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGY----LDKLEPSKITKFENAFLSHVVSQ 470 480 490 500 510 CCDS11 HQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA 520 530 540 550 >>CCDS8924.1 ATP5B gene_id:506|Hs108|chr12 (529 aa) initn: 384 init1: 140 opt: 368 Z-score: 471.2 bits: 96.8 E(32554): 6.4e-20 Smith-Waterman score: 445; 25.7% identity (55.0% similar) in 513 aa overlap (8-503:15-499) 10 20 30 40 50 pF1KE4 MALRAMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGV : . .: .: . . : :. :.: .: . :. ... CCDS89 MLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKA-GAA 10 20 30 40 50 60 70 80 90 100 pF1KE4 NGPLV-----ILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVS---GSKAVVQV-FEGTSG .: .: ..: :.: . . .: ... ::::. : ..: . ..:: : CCDS89 TGRIVAVIGAVVD-VQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEG 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE4 IDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID-RGPVVLAEDFLDIMGQPINPQCR . .. . .: .. ::. . :::..: :.::: :::. ...: : .. . . CCDS89 L-VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIK-TKQFAPIHAEAPEFMEM 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE4 IYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYS .:.. :::...: . :.: :: .:..::. .. . .. . : :.. :: CCDS89 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN---VAKAHG--GYS 180 190 200 210 220 230 230 240 250 260 270 pF1KE4 EENFAIVFAAMGVNMETARFFKSDFEENGSMD------NVCLFLNLANDPTIERIITPRL :::..: . . . .. :.: .. .: : . :.: : . CCDS89 ------VFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALT 240 250 260 270 280 280 290 300 310 320 330 pF1KE4 ALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYER .::.::.. : . ::... .. ...: :::: ..:. :. . ::..:. :: CCDS89 GLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQER 290 300 310 320 330 340 340 350 360 370 380 390 pF1KE4 AGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPS . ..::::.. . .: ::.: : : : .. ..: . . ::: .. : : CCDS89 I--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDS 350 360 370 380 390 400 400 410 420 430 440 450 pF1KE4 LSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQK ::.: : . ..: ::. . :..: . :..: . :. .: : . .: CCDS89 TSRIMDPNI----VGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARK 410 420 430 440 450 460 470 480 490 500 510 pF1KE4 FERNFIAQGPYENRTVFETLDIGWQLLRIFP-KEMLKRIPQSTLSEFYPRDSAKH ..: :..: :.. :: : .: .. : :: .: . : .:. CCDS89 IQR-FLSQ-PFQVAEVF-TGHMG----KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGP 460 470 480 490 500 510 CCDS89 IEEAVAKADKLAEEHSS 520 >>CCDS59315.1 ATP5A1 gene_id:498|Hs108|chr18 (531 aa) initn: 305 init1: 132 opt: 328 Z-score: 419.4 bits: 87.2 E(32554): 4.8e-17 Smith-Waterman score: 341; 23.7% identity (53.2% similar) in 489 aa overlap (35-503:21-485) 10 20 30 40 50 60 pF1KE4 AMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGVNGPLVILDHVK :::: :.. .. .. . : : .. CCDS59 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAE 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 FPRYAE--IVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDI--LR . : :. ...:.:: .. . : :. : ...:.. ::.. . . CCDS59 MSSILEERILGADTSVDLEETGRVLSIGDGIARVH---GLRNVQAEEM-VEFSSGLKGMS 60 70 80 90 100 130 140 150 160 pF1KE4 TPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCR---------IYPE---- . : .: : :. : : .: .: . :. ::. . : : :. CCDS59 LNLEPDNVGVVVFGNDKLIKEGDIV--KRTGAIVDGPIGSKTRRRVGLKAPGIIPRISVR 110 120 130 140 150 160 170 180 190 200 210 220 pF1KE4 EMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKSKDVVDYSEEN : .::::.:.:.. :.:::. :.. .. :: . : : :. .: : ... CCDS59 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRFNDGSDEKKKL 170 180 190 200 210 220 230 240 250 260 270 280 pF1KE4 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLA . : ..:.: . :. . . . . .: . . :.: . . ..: . . .:.. CCDS59 YCI-YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF- 230 240 250 260 270 290 300 310 320 330 340 pF1KE4 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGR-- . ::.:.: :.:. : : :..: .. :::...:: .. . . :::.... CCDS59 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG 280 290 300 310 320 330 350 360 370 380 390 400 pF1KE4 NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKS .::.: .:.. :.. :: . ::.:::... .: . : : ::: :.:: CCDS59 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSR---- 340 350 360 370 380 390 410 420 430 440 450 460 pF1KE4 AIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIA .: . . .:.. . : ..: :. : : . .. . : . .. : .. CCDS59 -VGSAAQTRAMKQVAGTMKLELAQYREVAAF-AQFGSDLDAATQQLLSRGVRLTE--LLK 400 410 420 430 440 450 470 480 490 500 510 pF1KE4 QGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH :: : .. : . . . .: . : .. : ...: CCDS59 QGQYSPMAIEEQVAVIYAGVRGY----LDKLEPSKITKFENAFLSHVVSQHQALLGTIRA 460 470 480 490 500 CCDS59 DGKISEQSDAKLKEIVTNFLAGFEA 510 520 530 >>CCDS2976.1 ATP6V1A gene_id:523|Hs108|chr3 (617 aa) initn: 206 init1: 155 opt: 305 Z-score: 388.7 bits: 81.8 E(32554): 2.5e-15 Smith-Waterman score: 306; 24.3% identity (55.6% similar) in 374 aa overlap (148-499:201-558) 120 130 140 150 160 170 pF1KE4 ILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEM-----IQT : : .. :. : : :.. . : CCDS29 RNRGTVTYIAPPGNYDTSDVVLELEFEGVKEKFTMVQVWPVR-QVRPVTEKLPANHPLLT 180 190 200 210 220 180 190 200 210 220 230 pF1KE4 GISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFA : ..:.. ..: : .: : .. :. .. . . ..::. : . . CCDS29 GQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYS-----NSDVIIY------VGCG 230 240 250 260 270 240 250 260 270 280 pF1KE4 AMGVNM-ETAR-FFKSDFEENGSMDNV----CLFLNLANDPTIERIITPRLALTTAEFLA : .: :. : : . .: .:..... : : .: :. : . ..: .:.. CCDS29 ERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYF- 280 290 300 310 320 330 290 300 310 320 330 340 pF1KE4 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE--G- . :: .. . : .::::::.:. :.:. :.:.:. . ::..:::::::. : CCDS29 RDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGN 340 350 360 370 380 390 350 360 370 380 390 400 pF1KE4 --RNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRL :.::.. . .. :. :.. :. . : :.. .:..: .:. .: .: : : :. CCDS29 PEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKY 400 410 420 430 440 450 410 420 430 440 450 pF1KE4 MKSAIGEGMTRK--DHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFE :. :. : . .. . . . .. .:. . .::. .:. : . :: . .. CCDS29 MR-ALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIK 460 470 480 490 500 510 460 470 480 490 500 510 pF1KE4 RNFIAQG---PYENRTVF-ETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH .:. :. ::. : .:. . ... .. .: .: ..: CCDS29 DDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFY--DMARRAVETTAQSDNKITWSIIREHM 520 530 540 550 560 570 CCDS29 GDILYKLSSMKFKDPLKDGEAKIKSDYAQLLEDMQNAFRSLED 580 590 600 610 511 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:47:55 2016 done: Sun Nov 6 00:47:56 2016 Total Scan time: 3.070 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]