Result of FASTA (omim) for
pFN21AE5228
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5228, 236 aa
1>>>pF1KE5228 236 - 236 aa - 236 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6312+/-0.00039; mu= 17.8585+/- 0.024
mean_var=60.4448+/-12.753, 0's: 0 Z-trim(111.8): 89 B-trim: 1312 in 1/47
Lambda= 0.164966
statistics sampled from 20466 (20555) to 20466 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.604), E-opt: 0.2 (0.241), width: 16
Scan time: 4.660
The best scores are: opt bits E(85289)
NP_004347 (OMIM: 186845,613496) CD81 antigen isofo ( 236) 1581 384.6 7.7e-107
XP_011518794 (OMIM: 186845,613496) PREDICTED: CD81 ( 229) 1417 345.6 4.2e-95
XP_016874087 (OMIM: 186845,613496) PREDICTED: CD81 ( 165) 1096 269.1 3.3e-72
NP_001284578 (OMIM: 186845,613496) CD81 antigen is ( 165) 1096 269.1 3.3e-72
NP_001760 (OMIM: 143030) CD9 antigen isoform 1 [Ho ( 228) 722 180.2 2.6e-45
XP_005253871 (OMIM: 143030) PREDICTED: CD9 antigen ( 249) 540 136.9 3.1e-32
NP_001295245 (OMIM: 613133) tetraspanin-2 isoform ( 193) 482 123.0 3.6e-28
NP_005716 (OMIM: 613133) tetraspanin-2 isoform 1 [ ( 221) 480 122.6 5.5e-28
NP_001317241 (OMIM: 143030) CD9 antigen isform 2 [ ( 159) 464 118.7 6e-27
NP_006666 (OMIM: 613137) tetraspanin-9 [Homo sapie ( 239) 384 99.8 4.4e-21
NP_001161792 (OMIM: 613137) tetraspanin-9 [Homo sa ( 239) 384 99.8 4.4e-21
NP_004607 (OMIM: 600769) tetraspanin-8 [Homo sapie ( 237) 380 98.8 8.5e-21
XP_006719646 (OMIM: 600769) PREDICTED: tetraspanin ( 237) 380 98.8 8.5e-21
XP_016875402 (OMIM: 600769) PREDICTED: tetraspanin ( 237) 380 98.8 8.5e-21
NP_001020406 (OMIM: 602644) tetraspanin-4 isoform ( 238) 365 95.2 1e-19
NP_001020407 (OMIM: 602644) tetraspanin-4 isoform ( 238) 365 95.2 1e-19
NP_001020408 (OMIM: 602644) tetraspanin-4 isoform ( 238) 365 95.2 1e-19
XP_005253159 (OMIM: 602644) PREDICTED: tetraspanin ( 238) 365 95.2 1e-19
NP_001020409 (OMIM: 602644) tetraspanin-4 isoform ( 238) 365 95.2 1e-19
NP_001020405 (OMIM: 602644) tetraspanin-4 isoform ( 238) 365 95.2 1e-19
NP_003262 (OMIM: 602644) tetraspanin-4 isoform a [ ( 238) 365 95.2 1e-19
XP_006718286 (OMIM: 176807,600623) PREDICTED: CD82 ( 267) 315 83.4 4.2e-16
NP_002222 (OMIM: 176807,600623) CD82 antigen isofo ( 267) 315 83.4 4.2e-16
XP_016855485 (OMIM: 613133) PREDICTED: tetraspanin ( 168) 305 80.9 1.6e-15
NP_001295244 (OMIM: 613133) tetraspanin-2 isoform ( 196) 305 80.9 1.7e-15
NP_005718 (OMIM: 613170) tetraspanin-1 [Homo sapie ( 241) 297 79.1 7.6e-15
XP_011538762 (OMIM: 613170) PREDICTED: tetraspanin ( 258) 297 79.1 8.1e-15
NP_001020015 (OMIM: 176807,600623) CD82 antigen is ( 242) 293 78.1 1.5e-14
NP_001035122 (OMIM: 151525) leukocyte surface anti ( 219) 292 77.8 1.6e-14
NP_000551 (OMIM: 151525) leukocyte surface antigen ( 219) 292 77.8 1.6e-14
NP_004348 (OMIM: 179620,602243,609057) CD151 antig ( 253) 286 76.5 4.9e-14
NP_001034579 (OMIM: 179620,602243,609057) CD151 an ( 253) 286 76.5 4.9e-14
NP_620599 (OMIM: 179620,602243,609057) CD151 antig ( 253) 286 76.5 4.9e-14
NP_620598 (OMIM: 179620,602243,609057) CD151 antig ( 253) 286 76.5 4.9e-14
NP_005714 (OMIM: 613136) tetraspanin-5 [Homo sapie ( 268) 283 75.8 8.3e-14
XP_011518638 (OMIM: 602644) PREDICTED: tetraspanin ( 269) 278 74.6 1.9e-13
NP_003261 (OMIM: 300191) tetraspanin-6 isoform a [ ( 245) 277 74.3 2.1e-13
NP_001765 (OMIM: 151523) leukocyte antigen CD37 is ( 281) 275 73.9 3.2e-13
XP_005259492 (OMIM: 151523) PREDICTED: leukocyte a ( 365) 275 74.0 4e-13
NP_001307567 (OMIM: 151525) leukocyte surface anti ( 160) 251 68.0 1.1e-11
NP_001244320 (OMIM: 155740) CD63 antigen isoform A ( 238) 252 68.4 1.3e-11
NP_001254627 (OMIM: 155740) CD63 antigen isoform A ( 238) 252 68.4 1.3e-11
NP_001244318 (OMIM: 155740) CD63 antigen isoform A ( 238) 252 68.4 1.3e-11
NP_001771 (OMIM: 155740) CD63 antigen isoform A [H ( 238) 252 68.4 1.3e-11
NP_001244319 (OMIM: 155740) CD63 antigen isoform A ( 238) 252 68.4 1.3e-11
XP_011519214 (OMIM: 613137) PREDICTED: tetraspanin ( 175) 239 65.2 8.6e-11
XP_011519215 (OMIM: 613137) PREDICTED: tetraspanin ( 175) 239 65.2 8.6e-11
XP_011518640 (OMIM: 602644) PREDICTED: tetraspanin ( 174) 233 63.7 2.3e-10
NP_001020410 (OMIM: 602644) tetraspanin-4 isoform ( 174) 233 63.7 2.3e-10
XP_011518643 (OMIM: 602644) PREDICTED: tetraspanin ( 174) 233 63.7 2.3e-10
>>NP_004347 (OMIM: 186845,613496) CD81 antigen isoform 1 (236 aa)
initn: 1581 init1: 1581 opt: 1581 Z-score: 2039.1 bits: 384.6 E(85289): 7.7e-107
Smith-Waterman score: 1581; 100.0% identity (100.0% similar) in 236 aa overlap (1-236:1-236)
10 20 30 40 50 60
pF1KE5 MGVEGCTKCIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTNLLYLELGDKPAPNTFYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MGVEGCTKCIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTNLLYLELGDKPAPNTFYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 GIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 KDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGSN
130 140 150 160 170 180
190 200 210 220 230
pF1KE5 IISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLCCGIRNSSVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 IISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLCCGIRNSSVY
190 200 210 220 230
>>XP_011518794 (OMIM: 186845,613496) PREDICTED: CD81 ant (229 aa)
initn: 1417 init1: 1417 opt: 1417 Z-score: 1828.4 bits: 345.6 E(85289): 4.2e-95
Smith-Waterman score: 1417; 100.0% identity (100.0% similar) in 214 aa overlap (23-236:16-229)
10 20 30 40 50 60
pF1KE5 MGVEGCTKCIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTNLLYLELGDKPAPNTFYV
::::::::::::::::::::::::::::::::::::::
XP_011 MAPFVHARAGKTKAQLAGGVILGVALWLRHDPQTTNLLYLELGDKPAPNTFYV
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 GIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIA
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 KDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGSN
120 130 140 150 160 170
190 200 210 220 230
pF1KE5 IISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLCCGIRNSSVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLCCGIRNSSVY
180 190 200 210 220
>>XP_016874087 (OMIM: 186845,613496) PREDICTED: CD81 ant (165 aa)
initn: 1096 init1: 1096 opt: 1096 Z-score: 1417.4 bits: 269.1 E(85289): 3.3e-72
Smith-Waterman score: 1096; 100.0% identity (100.0% similar) in 165 aa overlap (72-236:1-165)
50 60 70 80 90 100
pF1KE5 TNLLYLELGDKPAPNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVIL
::::::::::::::::::::::::::::::
XP_016 MMFVGFLGCYGAIQESQCLLGTFFTCLVIL
10 20 30
110 120 130 140 150 160
pF1KE5 FACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSST
40 50 60 70 80 90
170 180 190 200 210 220
pF1KE5 LTALTTSVLKNNLCPSGSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTALTTSVLKNNLCPSGSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMI
100 110 120 130 140 150
230
pF1KE5 LSMVLCCGIRNSSVY
:::::::::::::::
XP_016 LSMVLCCGIRNSSVY
160
>>NP_001284578 (OMIM: 186845,613496) CD81 antigen isofor (165 aa)
initn: 1096 init1: 1096 opt: 1096 Z-score: 1417.4 bits: 269.1 E(85289): 3.3e-72
Smith-Waterman score: 1096; 100.0% identity (100.0% similar) in 165 aa overlap (72-236:1-165)
50 60 70 80 90 100
pF1KE5 TNLLYLELGDKPAPNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVIL
::::::::::::::::::::::::::::::
NP_001 MMFVGFLGCYGAIQESQCLLGTFFTCLVIL
10 20 30
110 120 130 140 150 160
pF1KE5 FACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSST
40 50 60 70 80 90
170 180 190 200 210 220
pF1KE5 LTALTTSVLKNNLCPSGSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTALTTSVLKNNLCPSGSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMI
100 110 120 130 140 150
230
pF1KE5 LSMVLCCGIRNSSVY
:::::::::::::::
NP_001 LSMVLCCGIRNSSVY
160
>>NP_001760 (OMIM: 143030) CD9 antigen isoform 1 [Homo s (228 aa)
initn: 714 init1: 335 opt: 722 Z-score: 934.4 bits: 180.2 E(85289): 2.6e-45
Smith-Waterman score: 722; 44.6% identity (78.4% similar) in 231 aa overlap (1-231:1-222)
10 20 30 40 50 60
pF1KE5 MGVEGCTKCIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTNLLYLELGDKPAPNTFYV
: :.: ::::::::: :::.::::: ..:...:::: : :: ... : ... ..::.
NP_001 MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNN--SSFYT
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 GIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIA
:.::::..::.::.:::::: ::.:::::.:: :: :...:: :.::.:::. .::..
NP_001 GVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVI
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 KDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGSN
:.:..:: .. .. . :. . . ..:..: .:.::: : . . ...::. ..
NP_001 KEVQEFYKDTYNKLKTKDEPQ--RETLKAIHYALNCCG----LAGGVEQFISDICPK-KD
120 130 140 150 160 170
190 200 210 220 230
pF1KE5 IISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLCCGIRNSSVY
.. .. ..: . : ..:..:...:: ..: .::.::: ::.::.:::.::
NP_001 VLETFTVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNREMV
180 190 200 210 220
>>XP_005253871 (OMIM: 143030) PREDICTED: CD9 antigen iso (249 aa)
initn: 527 init1: 335 opt: 540 Z-score: 699.8 bits: 136.9 E(85289): 3.1e-32
Smith-Waterman score: 540; 48.1% identity (79.6% similar) in 162 aa overlap (1-162:1-158)
10 20 30 40 50 60
pF1KE5 MGVEGCTKCIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTNLLYLELGDKPAPNTFYV
: :.: ::::::::: :::.::::: ..:...:::: : :: ... : ... ..::.
XP_005 MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNN--SSFYT
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 GIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIA
:.::::..::.::.:::::: ::.:::::.:: :: :...:: :.::.:::. .::..
XP_005 GVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVI
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 KDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGSN
:.:..:: .. .. . :. . . ..:..: .. :..::
XP_005 KEVQEFYKDTYNKLKTKDEPQ--RETLKAIHYAVCRLGKDTLLRFLRIVSAHRVLTAPDQ
120 130 140 150 160 170
190 200 210 220 230
pF1KE5 IISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLCCGIRNSSVY
XP_005 CKHSNRLLTICFSHPHPCLLAVVELLWFGWGRGTVYLRHLPQEGRTRNLHREGKLRPGSW
180 190 200 210 220 230
>>NP_001295245 (OMIM: 613133) tetraspanin-2 isoform 3 [H (193 aa)
initn: 568 init1: 315 opt: 482 Z-score: 626.7 bits: 123.0 E(85289): 3.6e-28
Smith-Waterman score: 498; 37.6% identity (62.4% similar) in 234 aa overlap (1-233:1-189)
10 20 30 40 50
pF1KE5 MG-VEGCTKCIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTNLLYLELGDKPAPNTFY
:: .: .::::::. ::..:::::..... .::.: .: .. .:. ::
NP_001 MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGAIKELS----SEDKSPEYFY
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 VGIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQI
::.:.:...::.:: :::.:: ::..::::.::.:::::...:: ::..:...:..:
NP_001 VGLYVLVGAGALMMAVGFFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKGVA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 AKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGS
. :. .:..: .. . : .:. . ::: :..:::. . . . ::
NP_001 IRHVQTMYEEAYNDYLKDRGKGNGTLI--TFHSTFQCCGKESSEQVQPT------CP---
120 130 140 150 160
180 190 200 210 220 230
pF1KE5 NIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLCCGIRNSSVY
:: :.: :: ::.::::::.::::
NP_001 -------KE---------------LLGHK--------IFGMIFSMVLCCAIRNSRDVI
170 180 190
>>NP_005716 (OMIM: 613133) tetraspanin-2 isoform 1 [Homo (221 aa)
initn: 631 init1: 315 opt: 480 Z-score: 623.4 bits: 122.6 E(85289): 5.5e-28
Smith-Waterman score: 610; 41.0% identity (70.9% similar) in 234 aa overlap (1-233:1-217)
10 20 30 40 50
pF1KE5 MG-VEGCTKCIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTNLLYLELGDKPAPNTFY
:: .: .::::::. ::..:::::..... .::.: .: .. .:. ::
NP_005 MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGAIKELS----SEDKSPEYFY
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 VGIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQI
::.:.:...::.:: :::.:: ::..::::.::.:::::...:: ::..:...:..:
NP_005 VGLYVLVGAGALMMAVGFFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKGVA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 AKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGS
. :. .:..: .. . : .:. . ::: :..:::. . . . ::.
NP_005 IRHVQTMYEEAYNDYLKDRGKGNGTLI--TFHSTFQCCGKESSEQVQPT------CPK--
120 130 140 150 160
180 190 200 210 220 230
pF1KE5 NIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLCCGIRNSSVY
: ...: ..:. ..: :: ::::..: .: . :: ::.::::::.::::
NP_005 ---ELLGHKNCIDEIETIISVKLQLIGIVGIGIAGLTIFGMIFSMVLCCAIRNSRDVI
170 180 190 200 210 220
>>NP_001317241 (OMIM: 143030) CD9 antigen isform 2 [Homo (159 aa)
initn: 454 init1: 267 opt: 464 Z-score: 604.7 bits: 118.7 E(85289): 6e-27
Smith-Waterman score: 464; 40.6% identity (76.9% similar) in 160 aa overlap (72-231:1-153)
50 60 70 80 90 100
pF1KE5 TNLLYLELGDKPAPNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVIL
::.:::::: ::.:::::.:: :: :...
NP_001 MMLVGFLGCCGAVQESQCMLGLFFGFLLVI
10 20 30
110 120 130 140 150 160
pF1KE5 FACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSST
:: :.::.:::. .::.. :.:..:: .. .. . :. . . ..:..: .:.:::
NP_001 FAIEIAAAIWGYSHKDEVIKEVQEFYKDTYNKLKTKDEPQ--RETLKAIHYALNCCG---
40 50 60 70 80
170 180 190 200 210 220
pF1KE5 LTALTTSVLKNNLCPSGSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMI
: . . ...::. .... .. ..: . : ..:..:...:: ..: .::.::: ::
NP_001 -LAGGVEQFISDICPK-KDVLETFTVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMI
90 100 110 120 130 140
230
pF1KE5 LSMVLCCGIRNSSVY
.::.:::.::
NP_001 FSMILCCAIRRNREMV
150
>>NP_006666 (OMIM: 613137) tetraspanin-9 [Homo sapiens] (239 aa)
initn: 368 init1: 180 opt: 384 Z-score: 499.4 bits: 99.8 E(85289): 4.4e-21
Smith-Waterman score: 384; 28.6% identity (59.8% similar) in 234 aa overlap (5-226:4-226)
10 20 30 40 50 60
pF1KE5 MGVEGCTKCIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTNLLYLELGDKPAPNTFYV
:: :.::..:.::..::: : .:::..:: . . . . . : :
NP_006 MARGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSAAN----
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 GIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIA
..::.:...: .::::: :::.:..::: .:: :.... :. : :: :..
NP_006 ---LVIAIGTIVMVTGFLGCLGAIKENKCLLLSFFIVLLVILLAELILLILFFVYMDKVN
60 70 80 90 100 110
130 140 150 160 170
pF1KE5 KDVKQFYDQALQQAVVDDDAN--NAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPS-
...:. ..: ...... :: .... . ::: . : :: .: :.
NP_006 ENAKKDLKEGLLLYHTENNVGLKNAWNIIQA---EMRCCGVTDYTDWYP-VLGENTVPDR
120 130 140 150 160
180 190 200 210 220
pF1KE5 ---------GSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLCC
: : . :.. :..:. :. . ...: ... . ...:. : .::.:
NP_006 CCMENSQGCGRNATTPLWRTGCYEKVKMWFDDNKHVLGTVGMCILIMQILGMAFSMTLFQ
170 180 190 200 210 220
230
pF1KE5 GIRNSSVY
NP_006 HIHRTGKKYDA
230
236 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 20:26:13 2016 done: Mon Nov 7 20:26:14 2016
Total Scan time: 4.660 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]