FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5701, 748 aa 1>>>pF1KE5701 748 - 748 aa - 748 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0066+/-0.000963; mu= 13.2100+/- 0.058 mean_var=130.7402+/-25.657, 0's: 0 Z-trim(109.3): 21 B-trim: 151 in 1/52 Lambda= 0.112168 statistics sampled from 10776 (10781) to 10776 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.686), E-opt: 0.2 (0.331), width: 16 Scan time: 3.960 The best scores are: opt bits E(32554) CCDS7742.1 CARS gene_id:833|Hs108|chr11 ( 748) 5011 822.8 0 CCDS41600.1 CARS gene_id:833|Hs108|chr11 ( 831) 4957 814.1 0 CCDS41602.1 CARS gene_id:833|Hs108|chr11 ( 726) 4729 777.1 0 CCDS9514.1 CARS2 gene_id:79587|Hs108|chr13 ( 564) 668 119.9 1.1e-26 >>CCDS7742.1 CARS gene_id:833|Hs108|chr11 (748 aa) initn: 5011 init1: 5011 opt: 5011 Z-score: 4389.0 bits: 822.8 E(32554): 0 Smith-Waterman score: 5011; 100.0% identity (100.0% similar) in 748 aa overlap (1-748:1-748) 10 20 30 40 50 60 pF1KE5 MADSSGQQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 MADSSGQQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 DASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 DASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 EAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 EAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 SCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 SCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 VSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 VSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 EGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 EGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASM 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 DIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 LKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 LKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQF 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 EKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 EKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPN 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 QALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 QALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRK 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 IAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 IAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEE 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE5 KRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 KRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQ 670 680 690 700 710 720 730 740 pF1KE5 AKKLKKLFEAQEKLYKEYLQMAQNGSFQ :::::::::::::::::::::::::::: CCDS77 AKKLKKLFEAQEKLYKEYLQMAQNGSFQ 730 740 >>CCDS41600.1 CARS gene_id:833|Hs108|chr11 (831 aa) initn: 4957 init1: 4957 opt: 4957 Z-score: 4341.1 bits: 814.1 E(32554): 0 Smith-Waterman score: 4957; 99.7% identity (99.9% similar) in 742 aa overlap (7-748:90-831) 10 20 30 pF1KE5 MADSSGQQGKGRRVQPQWSPPAGTQPCRLHLYNSLT : .::::::::::::::::::::::::::: CCDS41 DPQLFHVARWFRHIEALLGSPCGKGQPCRLQASKGRRVQPQWSPPAGTQPCRLHLYNSLT 60 70 80 90 100 110 40 50 60 70 80 90 pF1KE5 RNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 RNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNIT 120 130 140 150 160 170 100 110 120 130 140 150 pF1KE5 DIDDKIIKRARQNHLFEQYREKRPEAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 DIDDKIIKRARQNHLFEQYREKRPEAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQ 180 190 200 210 220 230 160 170 180 190 200 210 pF1KE5 HAVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 HAVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLP 240 250 260 270 280 290 220 230 240 250 260 270 pF1KE5 KFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 KFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFA 300 310 320 330 340 350 280 290 300 310 320 330 pF1KE5 SSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 SSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCP 360 370 380 390 400 410 340 350 360 370 380 390 pF1KE5 WGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 WGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLH 420 430 440 450 460 470 400 410 420 430 440 450 pF1KE5 TGHLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 TGHLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYE 480 490 500 510 520 530 460 470 480 490 500 510 pF1KE5 KFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 KFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVME 540 550 560 570 580 590 520 530 540 550 560 570 pF1KE5 EMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 EMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGT 600 610 620 630 640 650 580 590 600 610 620 630 pF1KE5 SLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 SLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLP 660 670 680 690 700 710 640 650 660 670 680 690 pF1KE5 TVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 TVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETD 720 730 740 750 760 770 700 710 720 730 740 pF1KE5 KYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 KYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ 780 790 800 810 820 830 >>CCDS41602.1 CARS gene_id:833|Hs108|chr11 (726 aa) initn: 4725 init1: 4725 opt: 4729 Z-score: 4142.5 bits: 777.1 E(32554): 0 Smith-Waterman score: 4729; 97.7% identity (98.3% similar) in 725 aa overlap (1-722:1-725) 10 20 30 40 50 60 pF1KE5 MADSSGQQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MADSSGQQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 DASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 DASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 EAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 EAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 SCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 SCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 VSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 VSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 EGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 EGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASM 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 DIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 LKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 LKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQF 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 EKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 EKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPN 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 QALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 QALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRK 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 IAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 IAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEE 610 620 630 640 650 660 670 680 690 700 710 pF1KE5 KRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENG---LPTHDMEGKELS :::::::::::::::::::::::::::::::::::::::::::: : ..: . CCDS41 KRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENVSMVCPHMTWRAKSSA 670 680 690 700 710 720 720 730 740 pF1KE5 KGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ ::. . CCDS41 KGKPRS >>CCDS9514.1 CARS2 gene_id:79587|Hs108|chr13 (564 aa) initn: 1083 init1: 437 opt: 668 Z-score: 592.5 bits: 119.9 E(32554): 1.1e-26 Smith-Waterman score: 954; 32.9% identity (54.4% similar) in 662 aa overlap (2-646:30-557) 10 20 30 pF1KE5 MADSSGQQGKGRRVQPQWSPPAGTQPCRLHLY : ... :.:: : :.: . ...: CCDS95 MLRTTRGPGLGPPLLQAALGLGRAGWHWPAGRAASGGRGR----AWLQPTGRETG-VQVY 10 20 30 40 50 40 50 60 70 80 90 pF1KE5 NSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYC :::: :: .: .. ..:: ::::::: .:.::: ::. :::.::.: : .. . CCDS95 NSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCSIVMV 60 70 80 90 100 110 100 110 120 130 140 150 pF1KE5 MNITDIDDKIIKRARQNHLFEQYREKRPEAAQLLEDVQAALKPFSVKLNETTDPDKKQML :.:::.:::::::: :: CCDS95 MGITDVDDKIIKRA----------------------------------NE---------- 120 130 160 170 180 190 200 210 pF1KE5 ERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIF . : CCDS95 --------MNISP----------------------------------------------- 220 230 240 250 260 270 pF1KE5 SKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY-VSNGSVYFD ..: ...: ::..:: ::.:::: : ::.: .:.:..:.. :. : .: ...:.:::: CCDS95 ASLASLYEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFD 140 150 160 170 180 190 280 290 300 310 320 330 pF1KE5 TAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEP .:. .::::: . : :: :: :.:: .:::::::.:: : CCDS95 L----KSRGDKYGKLVGVVPGPV-----GE-----PAD--SDKRHASDFALWKAAKPQEV 200 210 220 230 240 340 350 360 370 380 390 pF1KE5 SWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWV : ::: :::::::::::.:. ..:...:::.::.:: ::::.::.:: :.. . . : CCDS95 FWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWG 250 260 270 280 290 300 400 410 420 430 440 pF1KE5 RYFLHTGHLTIAGC--KMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTM ::::.::: : ::::::::.::::: :: : .:. : :.....:::...: CCDS95 NYFLHSGHLHAKGKEEKMSKSLKNYITIKDFLKTFSPDVFRFFCLRSSYRSAIDYSDSAM 310 320 330 340 350 360 450 460 470 480 490 500 pF1KE5 ESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALCDNV .: : :. :. ... .. ::. . .:: : . . . : :.. :: :. CCDS95 LQAQQLLLGLGSFLEDARAYMK------GQLACGSVREAMLWERLSSTKRAVKAALADDF 370 380 390 400 410 510 520 530 540 550 560 pF1KE5 DTRTVMEEMRALVSQCNLYMAARKAVRKRP-NQALLENIALYLTHMLKIFGAVEEDSSLG :: :.. . .:. . : . : . : . :.. : :. .... : ... CCDS95 DTPRVVDAILGLAHHGNGQLRASLKEPEGPRSPAVFGAIISYFEQFFETVGISLANQQY- 420 430 440 450 460 470 570 580 590 600 610 pF1KE5 FPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIA----------REQKVPE---ILQLSD :.: :. :::. .. : .::. ::..: :.:.. : .:. : CCDS95 --VSGDGS----EATLHGVVDELVRFRQKVRQFALAMPEATGDARRQQLLERQPLLEACD 480 490 500 510 520 620 630 640 650 660 670 pF1KE5 ALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQ .:: . : :. ..:. . .. .:.:. : CCDS95 TLRRG-LTAHGINIKDRSSTTSTWELLDQRTKDQKSAG 530 540 550 560 680 690 700 710 720 730 pF1KE5 EAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLY 748 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:54:23 2016 done: Tue Nov 8 05:54:24 2016 Total Scan time: 3.960 Total Display time: 0.090 Function used was FASTA [36.3.4 Apr, 2011]