FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4416, 429 aa 1>>>pF1KE4416 429 - 429 aa - 429 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1500+/-0.000389; mu= 17.6723+/- 0.024 mean_var=63.6205+/-12.798, 0's: 0 Z-trim(111.6): 49 B-trim: 0 in 0/50 Lambda= 0.160796 statistics sampled from 20278 (20290) to 20278 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.61), E-opt: 0.2 (0.238), width: 16 Scan time: 5.880 The best scores are: opt bits E(85289) NP_000160 (OMIM: 300644,301500) alpha-galactosidas ( 429) 3046 715.7 5.7e-206 XP_005261673 (OMIM: 104170,609241,609242) PREDICTE ( 411) 1282 306.4 8.5e-83 NP_000253 (OMIM: 104170,609241,609242) alpha-N-ace ( 411) 1282 306.4 8.5e-83 XP_005261672 (OMIM: 104170,609241,609242) PREDICTE ( 411) 1282 306.4 8.5e-83 >>NP_000160 (OMIM: 300644,301500) alpha-galactosidase A (429 aa) initn: 3046 init1: 3046 opt: 3046 Z-score: 3818.7 bits: 715.7 E(85289): 5.7e-206 Smith-Waterman score: 3046; 100.0% identity (100.0% similar) in 429 aa overlap (1-429:1-429) 10 20 30 40 50 60 pF1KE4 MQLRNPELHLGCALALRFLALVSWDIPGARALDNGLARTPTMGWLHWERFMCNLDCQEEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MQLRNPELHLGCALALRFLALVSWDIPGARALDNGLARTPTMGWLHWERFMCNLDCQEEP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 DSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 ANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 ADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 SILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 SILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 RHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 RHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 GPRSYTIAVASLGKGVACNPACFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQLENT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 GPRSYTIAVASLGKGVACNPACFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQLENT 370 380 390 400 410 420 pF1KE4 MQMSLKDLL ::::::::: NP_000 MQMSLKDLL >>XP_005261673 (OMIM: 104170,609241,609242) PREDICTED: a (411 aa) initn: 1102 init1: 774 opt: 1282 Z-score: 1607.5 bits: 306.4 E(85289): 8.5e-83 Smith-Waterman score: 1282; 49.9% identity (72.9% similar) in 399 aa overlap (32-424:18-409) 10 20 30 40 50 60 pF1KE4 QLRNPELHLGCALALRFLALVSWDIPGARALDNGLARTPTMGWLHWERFMCNLDCQEEPD ::::: .:: :::: :::: ::..:.:.: XP_005 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPK 10 20 30 40 70 80 90 100 110 120 pF1KE4 SCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLA .::::.::::::. :...::.: :: :: :::::.. ::. :::. ::.:::::: :: XP_005 NCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIGG-RDASGRLMPDPKRFPHGIPFLA 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE4 NYVHSKGLKLGIYADVGNKTCAGFPGS-FGYYDIDAQTFADWGVDLLKFDGCYCDSLENL .:::: :::::::::.:: :: :.::. . ::::::.: ::.::.:::. .. :. XP_005 DYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCF-STPEER 110 120 130 140 150 160 190 200 210 220 230 pF1KE4 ADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQ-KPNYTEIRQYCNHWRNFADIDDSWKSI :.:: .:. ::: ::: :..:: :: : . . ::. . . :: :::. ::.::: :. XP_005 AQGYPKMAAALNATGRPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSV 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE4 KSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSND :::.: .:. . ::::: :::::::.::::::: .:. .:::::...::::.::.: XP_005 LSILNWFVEHQDILQPVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTD 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE4 LRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNF-EVWERPLSGLAWAVAMIN-RQ :: :: : .::. .: ::::::: :: .... .. ::. ::::. : :..... : XP_005 LRTISAQNMDILQNPLMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRT 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE4 EIGGPRSYTIAVASLGKGVACNPACFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQL .. : : .:::. . . . .: . .. . . . :::.:.:. : XP_005 DM--PYRYH---SSLGQLNFTGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYL 350 360 370 380 390 400 420 pF1KE4 E--NTMQMSLKDLL ....:: XP_005 YPIKNLEMSQQ 410 >>NP_000253 (OMIM: 104170,609241,609242) alpha-N-acetylg (411 aa) initn: 1102 init1: 774 opt: 1282 Z-score: 1607.5 bits: 306.4 E(85289): 8.5e-83 Smith-Waterman score: 1282; 49.9% identity (72.9% similar) in 399 aa overlap (32-424:18-409) 10 20 30 40 50 60 pF1KE4 QLRNPELHLGCALALRFLALVSWDIPGARALDNGLARTPTMGWLHWERFMCNLDCQEEPD ::::: .:: :::: :::: ::..:.:.: NP_000 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPK 10 20 30 40 70 80 90 100 110 120 pF1KE4 SCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLA .::::.::::::. :...::.: :: :: :::::.. ::. :::. ::.:::::: :: NP_000 NCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIGG-RDASGRLMPDPKRFPHGIPFLA 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE4 NYVHSKGLKLGIYADVGNKTCAGFPGS-FGYYDIDAQTFADWGVDLLKFDGCYCDSLENL .:::: :::::::::.:: :: :.::. . ::::::.: ::.::.:::. .. :. NP_000 DYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCF-STPEER 110 120 130 140 150 160 190 200 210 220 230 pF1KE4 ADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQ-KPNYTEIRQYCNHWRNFADIDDSWKSI :.:: .:. ::: ::: :..:: :: : . . ::. . . :: :::. ::.::: :. NP_000 AQGYPKMAAALNATGRPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSV 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE4 KSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSND :::.: .:. . ::::: :::::::.::::::: .:. .:::::...::::.::.: NP_000 LSILNWFVEHQDILQPVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTD 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE4 LRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNF-EVWERPLSGLAWAVAMIN-RQ :: :: : .::. .: ::::::: :: .... .. ::. ::::. : :..... : NP_000 LRTISAQNMDILQNPLMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRT 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE4 EIGGPRSYTIAVASLGKGVACNPACFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQL .. : : .:::. . . . .: . .. . . . :::.:.:. : NP_000 DM--PYRYH---SSLGQLNFTGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYL 350 360 370 380 390 400 420 pF1KE4 E--NTMQMSLKDLL ....:: NP_000 YPIKNLEMSQQ 410 >>XP_005261672 (OMIM: 104170,609241,609242) PREDICTED: a (411 aa) initn: 1102 init1: 774 opt: 1282 Z-score: 1607.5 bits: 306.4 E(85289): 8.5e-83 Smith-Waterman score: 1282; 49.9% identity (72.9% similar) in 399 aa overlap (32-424:18-409) 10 20 30 40 50 60 pF1KE4 QLRNPELHLGCALALRFLALVSWDIPGARALDNGLARTPTMGWLHWERFMCNLDCQEEPD ::::: .:: :::: :::: ::..:.:.: XP_005 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPK 10 20 30 40 70 80 90 100 110 120 pF1KE4 SCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLA .::::.::::::. :...::.: :: :: :::::.. ::. :::. ::.:::::: :: XP_005 NCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIGG-RDASGRLMPDPKRFPHGIPFLA 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE4 NYVHSKGLKLGIYADVGNKTCAGFPGS-FGYYDIDAQTFADWGVDLLKFDGCYCDSLENL .:::: :::::::::.:: :: :.::. . ::::::.: ::.::.:::. .. :. XP_005 DYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCF-STPEER 110 120 130 140 150 160 190 200 210 220 230 pF1KE4 ADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQ-KPNYTEIRQYCNHWRNFADIDDSWKSI :.:: .:. ::: ::: :..:: :: : . . ::. . . :: :::. ::.::: :. XP_005 AQGYPKMAAALNATGRPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSV 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE4 KSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSND :::.: .:. . ::::: :::::::.::::::: .:. .:::::...::::.::.: XP_005 LSILNWFVEHQDILQPVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTD 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE4 LRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNF-EVWERPLSGLAWAVAMIN-RQ :: :: : .::. .: ::::::: :: .... .. ::. ::::. : :..... : XP_005 LRTISAQNMDILQNPLMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRT 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE4 EIGGPRSYTIAVASLGKGVACNPACFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQL .. : : .:::. . . . .: . .. . . . :::.:.:. : XP_005 DM--PYRYH---SSLGQLNFTGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYL 350 360 370 380 390 400 420 pF1KE4 E--NTMQMSLKDLL ....:: XP_005 YPIKNLEMSQQ 410 429 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:14:59 2016 done: Sun Nov 6 01:15:00 2016 Total Scan time: 5.880 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]