FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4416, 429 aa 1>>>pF1KE4416 429 - 429 aa - 429 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3444+/-0.000901; mu= 16.5490+/- 0.054 mean_var=59.7500+/-11.894, 0's: 0 Z-trim(104.9): 23 B-trim: 0 in 0/51 Lambda= 0.165923 statistics sampled from 8156 (8164) to 8156 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.63), E-opt: 0.2 (0.251), width: 16 Scan time: 2.580 The best scores are: opt bits E(32554) CCDS14484.1 GLA gene_id:2717|Hs108|chrX ( 429) 3046 737.7 5e-213 CCDS14030.1 NAGA gene_id:4668|Hs108|chr22 ( 411) 1282 315.5 6.2e-86 >>CCDS14484.1 GLA gene_id:2717|Hs108|chrX (429 aa) initn: 3046 init1: 3046 opt: 3046 Z-score: 3938.1 bits: 737.7 E(32554): 5e-213 Smith-Waterman score: 3046; 100.0% identity (100.0% similar) in 429 aa overlap (1-429:1-429) 10 20 30 40 50 60 pF1KE4 MQLRNPELHLGCALALRFLALVSWDIPGARALDNGLARTPTMGWLHWERFMCNLDCQEEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MQLRNPELHLGCALALRFLALVSWDIPGARALDNGLARTPTMGWLHWERFMCNLDCQEEP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 DSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 ANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 ADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 SILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 SILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 RHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 RHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLSGLAWAVAMINRQEIG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 GPRSYTIAVASLGKGVACNPACFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQLENT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 GPRSYTIAVASLGKGVACNPACFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQLENT 370 380 390 400 410 420 pF1KE4 MQMSLKDLL ::::::::: CCDS14 MQMSLKDLL >>CCDS14030.1 NAGA gene_id:4668|Hs108|chr22 (411 aa) initn: 1102 init1: 774 opt: 1282 Z-score: 1656.3 bits: 315.5 E(32554): 6.2e-86 Smith-Waterman score: 1282; 49.9% identity (72.9% similar) in 399 aa overlap (32-424:18-409) 10 20 30 40 50 60 pF1KE4 QLRNPELHLGCALALRFLALVSWDIPGARALDNGLARTPTMGWLHWERFMCNLDCQEEPD ::::: .:: :::: :::: ::..:.:.: CCDS14 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPK 10 20 30 40 70 80 90 100 110 120 pF1KE4 SCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLA .::::.::::::. :...::.: :: :: :::::.. ::. :::. ::.:::::: :: CCDS14 NCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIGG-RDASGRLMPDPKRFPHGIPFLA 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE4 NYVHSKGLKLGIYADVGNKTCAGFPGS-FGYYDIDAQTFADWGVDLLKFDGCYCDSLENL .:::: :::::::::.:: :: :.::. . ::::::.: ::.::.:::. .. :. CCDS14 DYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCF-STPEER 110 120 130 140 150 160 190 200 210 220 230 pF1KE4 ADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQ-KPNYTEIRQYCNHWRNFADIDDSWKSI :.:: .:. ::: ::: :..:: :: : . . ::. . . :: :::. ::.::: :. CCDS14 AQGYPKMAAALNATGRPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSV 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE4 KSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSND :::.: .:. . ::::: :::::::.::::::: .:. .:::::...::::.::.: CCDS14 LSILNWFVEHQDILQPVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTD 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE4 LRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNF-EVWERPLSGLAWAVAMIN-RQ :: :: : .::. .: ::::::: :: .... .. ::. ::::. : :..... : CCDS14 LRTISAQNMDILQNPLMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRT 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE4 EIGGPRSYTIAVASLGKGVACNPACFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQL .. : : .:::. . . . .: . .. . . . :::.:.:. : CCDS14 DM--PYRYH---SSLGQLNFTGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYL 350 360 370 380 390 400 420 pF1KE4 E--NTMQMSLKDLL ....:: CCDS14 YPIKNLEMSQQ 410 429 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:14:59 2016 done: Sun Nov 6 01:14:59 2016 Total Scan time: 2.580 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]