FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5105, 115 aa 1>>>pF1KE5105 115 - 115 aa - 115 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8720+/-0.000577; mu= 10.0371+/- 0.035 mean_var=94.6620+/-18.890, 0's: 0 Z-trim(116.0): 1 B-trim: 612 in 1/53 Lambda= 0.131822 statistics sampled from 16589 (16590) to 16589 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.823), E-opt: 0.2 (0.51), width: 16 Scan time: 1.650 The best scores are: opt bits E(32554) CCDS31832.1 RPS26 gene_id:6231|Hs108|chr12 ( 115) 796 159.7 3.7e-40 >>CCDS31832.1 RPS26 gene_id:6231|Hs108|chr12 (115 aa) initn: 796 init1: 796 opt: 796 Z-score: 834.4 bits: 159.7 E(32554): 3.7e-40 Smith-Waterman score: 796; 100.0% identity (100.0% similar) in 115 aa overlap (1-115:1-115) 10 20 30 40 50 60 pF1KE5 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPM ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPM 70 80 90 100 110 115 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 21:07:26 2016 done: Mon Nov 7 21:07:26 2016 Total Scan time: 1.650 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]