Result of FASTA (ccds) for
pFN21AB5013
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5013, 203 aa
1>>>pF1KB5013 203 - 203 aa - 203 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6708+/-0.00101; mu= 11.1002+/- 0.061
mean_var=79.2397+/-16.012, 0's: 0 Z-trim(105.5): 194 B-trim: 245 in 1/50
Lambda= 0.144080
statistics sampled from 8260 (8478) to 8260 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.648), E-opt: 0.2 (0.26), width: 16
Scan time: 1.880
The best scores are: opt bits E(32554)
CCDS1459.1 RAB29 gene_id:8934|Hs108|chr1 ( 203) 1357 291.6 2.2e-79
CCDS44301.1 RAB29 gene_id:8934|Hs108|chr1 ( 179) 936 204.1 4.4e-53
CCDS44302.1 RAB29 gene_id:8934|Hs108|chr1 ( 131) 886 193.6 4.6e-50
CCDS5210.1 RAB32 gene_id:10981|Hs108|chr6 ( 225) 713 157.8 4.8e-39
CCDS8281.1 RAB38 gene_id:23682|Hs108|chr11 ( 211) 710 157.1 7e-39
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 433 99.5 1.5e-21
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 430 98.9 2.2e-21
CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX ( 201) 429 98.7 2.6e-21
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 425 97.9 4.6e-21
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 422 97.3 7.2e-21
CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 ( 212) 417 96.2 1.5e-20
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 ( 220) 411 95.0 3.7e-20
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 ( 207) 407 94.1 6.3e-20
CCDS4962.1 RAB23 gene_id:51715|Hs108|chr6 ( 237) 404 93.6 1.1e-19
CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18 ( 244) 404 93.6 1.1e-19
CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3 ( 207) 403 93.3 1.1e-19
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 402 93.1 1.3e-19
CCDS3976.1 RAB3C gene_id:115827|Hs108|chr5 ( 227) 399 92.5 2.1e-19
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 397 92.1 2.6e-19
CCDS12257.1 RAB3D gene_id:9545|Hs108|chr19 ( 219) 397 92.1 2.8e-19
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 395 91.7 3.7e-19
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 386 89.8 1.5e-18
CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7 ( 217) 385 89.6 1.6e-18
CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX ( 201) 383 89.1 1.9e-18
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 382 89.0 2.4e-18
CCDS560.1 RAB3B gene_id:5865|Hs108|chr1 ( 219) 380 88.5 3.2e-18
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 379 88.3 3.6e-18
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 ( 216) 377 87.9 4.9e-18
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 376 87.7 5.5e-18
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 ( 249) 377 88.0 5.5e-18
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 375 87.5 6.2e-18
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 ( 215) 375 87.5 6.5e-18
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 369 86.2 1.5e-17
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 369 86.3 1.5e-17
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16 ( 190) 365 85.4 2.5e-17
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 ( 208) 364 85.2 3.1e-17
CCDS8338.1 RAB39A gene_id:54734|Hs108|chr11 ( 217) 362 84.8 4.3e-17
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 357 83.8 8.7e-17
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 357 83.8 9e-17
CCDS53836.1 RAB35 gene_id:11021|Hs108|chr12 ( 152) 352 82.6 1.3e-16
CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 ( 194) 353 82.9 1.4e-16
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17 ( 196) 353 82.9 1.4e-16
CCDS14766.1 RAB39B gene_id:116442|Hs108|chrX ( 213) 353 82.9 1.5e-16
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17 ( 228) 353 82.9 1.6e-16
CCDS3747.1 RAB33B gene_id:83452|Hs108|chr4 ( 229) 353 82.9 1.6e-16
CCDS73011.1 RAB7B gene_id:338382|Hs108|chr1 ( 199) 352 82.7 1.7e-16
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 ( 215) 351 82.5 2.1e-16
CCDS44803.1 CRACR2A gene_id:84766|Hs108|chr12 ( 731) 356 83.9 2.7e-16
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 346 81.5 4.2e-16
CCDS6662.1 RASEF gene_id:158158|Hs108|chr9 ( 740) 351 82.8 5.7e-16
>>CCDS1459.1 RAB29 gene_id:8934|Hs108|chr1 (203 aa)
initn: 1357 init1: 1357 opt: 1357 Z-score: 1538.6 bits: 291.6 E(32554): 2.2e-79
Smith-Waterman score: 1357; 100.0% identity (100.0% similar) in 203 aa overlap (1-203:1-203)
10 20 30 40 50 60
pF1KB5 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED
130 140 150 160 170 180
190 200
pF1KB5 IMSLSTQGDYINLQTKSSSWSCC
:::::::::::::::::::::::
CCDS14 IMSLSTQGDYINLQTKSSSWSCC
190 200
>>CCDS44301.1 RAB29 gene_id:8934|Hs108|chr1 (179 aa)
initn: 936 init1: 936 opt: 936 Z-score: 1066.5 bits: 204.1 E(32554): 4.4e-53
Smith-Waterman score: 1136; 88.2% identity (88.2% similar) in 203 aa overlap (1-203:1-179)
10 20 30 40 50 60
pF1KB5 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQ
:::::::::::::::::::::::::::::::::::::::::
CCDS44 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG-------------------
10 20 30 40
70 80 90 100 110 120
pF1KB5 LWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 -----GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC
50 60 70 80 90
130 140 150 160 170 180
pF1KB5 LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED
100 110 120 130 140 150
190 200
pF1KB5 IMSLSTQGDYINLQTKSSSWSCC
:::::::::::::::::::::::
CCDS44 IMSLSTQGDYINLQTKSSSWSCC
160 170
>>CCDS44302.1 RAB29 gene_id:8934|Hs108|chr1 (131 aa)
initn: 886 init1: 886 opt: 886 Z-score: 1012.3 bits: 193.6 E(32554): 4.6e-50
Smith-Waterman score: 886; 100.0% identity (100.0% similar) in 131 aa overlap (73-203:1-131)
50 60 70 80 90 100
pF1KB5 DFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRW
::::::::::::::::::::::::::::::
CCDS44 MTRLYYRDASACVIMFDVTNATTFSNSQRW
10 20 30
110 120 130 140 150 160
pF1KB5 KQDLDSKLTLPNGEPVPCLLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KQDLDSKLTLPNGEPVPCLLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNI
40 50 60 70 80 90
170 180 190 200
pF1KB5 NEAMRVLIEKMMRNSTEDIMSLSTQGDYINLQTKSSSWSCC
:::::::::::::::::::::::::::::::::::::::::
CCDS44 NEAMRVLIEKMMRNSTEDIMSLSTQGDYINLQTKSSSWSCC
100 110 120 130
>>CCDS5210.1 RAB32 gene_id:10981|Hs108|chr6 (225 aa)
initn: 685 init1: 563 opt: 713 Z-score: 814.5 bits: 157.8 E(32554): 4.8e-39
Smith-Waterman score: 713; 50.0% identity (77.9% similar) in 208 aa overlap (3-203:21-225)
10 20 30 40
pF1KB5 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV
.:.:::::::.:. .:::::...:: .. ::.::..:.::
CCDS52 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 DFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRW
:::::::.:.. .:::::::::::::: .:::.::..: . ..::.. ..:: .:
CCDS52 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 KQDLDSKLTLPNGEPVPCLLLANKCDLSPWAV-SRDQIDRFSKENGFTGWTETSVKENKN
:.:::::. :::: :.: .::::::: . . : .:.:.: ::.::.:: :::.:.: :
CCDS52 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNIN
130 140 150 160 170 180
170 180 190 200
pF1KB5 INEAMRVLIEKMMRNST------EDIMSLSTQGDYINLQTKSSSWSCC
:.:: : :.::.. : .:. ... . . . ..::. ::
CCDS52 IEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQ---CC
190 200 210 220
>>CCDS8281.1 RAB38 gene_id:23682|Hs108|chr11 (211 aa)
initn: 684 init1: 564 opt: 710 Z-score: 811.5 bits: 157.1 E(32554): 7e-39
Smith-Waterman score: 710; 52.0% identity (78.7% similar) in 202 aa overlap (4-203:6-205)
10 20 30 40 50
pF1KB5 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVR
..::.:.::.:: .:::::...:: ...::.::..:.:::::::::.:. .::
CCDS82 MQAPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPV
:::::::::::: .:::.:::.: . :.:::: .:: .::.::::::.::::.::
CCDS82 LQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 PCLLLANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN
.::::::: . .. . ..:.: ::.::.:: :::.::: ::.:: : :..... :
CCDS82 SVVLLANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILAN
130 140 150 160 170 180
180 190 200
pF1KB5 STEDIMSLSTQGDYINLQTKSSSWSCC
:.: : . : .. . :.. . :
CCDS82 EC-DLME-SIEPDVVKPHLTSTKVASCSGCAKS
190 200 210
>>CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 (203 aa)
initn: 383 init1: 176 opt: 433 Z-score: 500.6 bits: 99.5 E(32554): 1.5e-21
Smith-Waterman score: 433; 39.1% identity (72.4% similar) in 174 aa overlap (5-177:6-173)
10 20 30 40 50
pF1KB5 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRL
:::::.:..::..:::: :. :...:.:.. : ::.:.:: ..... .: .:
CCDS10 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 QLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVP
:.:: :::::: ..: ::: : . ....:.:. .: : : : ... : . : :
CCDS10 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSI--KENASAG--VE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 CLLLANKCDL-SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNST
:::.::::. . :...: :....:.:. . :::.: . :..::. : . .. .:
CCDS10 RLLLGNKCDMEAKRKVQKEQADKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLKSG
120 130 140 150 160 170
180 190 200
pF1KB5 EDIMSLSTQGDYINLQTKSSSWSCC
CCDS10 GRRSGNGNKPPSTDLKTCDKKNTNKCSLG
180 190 200
>>CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 (201 aa)
initn: 407 init1: 191 opt: 430 Z-score: 497.3 bits: 98.9 E(32554): 2.2e-21
Smith-Waterman score: 430; 36.1% identity (70.7% similar) in 205 aa overlap (5-203:6-201)
10 20 30 40 50
pF1KB5 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRL
:::::.:..::..:::.::. :.....:: : .:.:::: ..... . : :.:
CCDS41 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEING-EKVKL
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 QLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVP
:.:: :::::: ..: ::: . . ....:::.: .: : .:: ..... : . :
CCDS41 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ-----NCDDVC
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 CLLLANKCDLSPW--AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNS
.:..:: : .: .: .. .:. . :. . :::.::: :..: . . : ..: .
CCDS41 RILVGNKND-DPERKVVETEDAYKFAGQMGIQLF-ETSAKENVNVEEMFNCITELVLRAK
120 130 140 150 160 170
180 190 200
pF1KB5 TEDI--MSLSTQGDYINLQTKSSSWS--CC
... .. . :.: ..: ::.:. . ::
CCDS41 KDNLAKQQQQQQNDVVKL-TKNSKRKKRCC
180 190 200
>>CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX (201 aa)
initn: 387 init1: 265 opt: 429 Z-score: 496.2 bits: 98.7 E(32554): 2.6e-21
Smith-Waterman score: 429; 34.8% identity (67.2% similar) in 204 aa overlap (1-203:1-201)
10 20 30 40 50 60
pF1KB5 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQ
:.... ::::...::..:::.::..:: ..:. . :.::.: : :. : ..: .:
CCDS14 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLE-VDGHFVTMQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 LWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC
.:: :::::: :. .:: .. :.. :.: .. .:.: . ::... . . : :
CCDS14 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED
..:.:: :.: :: .. . . ..:: . :::.:. :. :.. ..... .:::
CCDS14 VILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL--ATED
120 130 140 150 160 170
190 200
pF1KB5 IMSLSTQGDYINLQTKSS-SWSCC
. : : .::. : . : :::
CCDS14 RSDHLIQTDTVNLHRKPKPSSSCC
180 190 200
>>CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 (200 aa)
initn: 387 init1: 182 opt: 425 Z-score: 491.7 bits: 97.9 E(32554): 4.6e-21
Smith-Waterman score: 425; 34.6% identity (69.7% similar) in 208 aa overlap (3-203:5-200)
10 20 30 40 50
pF1KB5 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVR
. : :::.:..::..:::: .. :.:.:.:. . ::.:.:: .:... . .: .
CCDS17 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-K
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPV
::.:: :::::: ..: ::: : . ....:.::. .: : ..: ...: . .: :
CCDS17 LQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH----ANEDV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 PCLLLANKCDLSPW-AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNS
.::.::::.. .: . . .....:.:. . :::.: : ::..:. .: : ..:..
CCDS17 ERMLLGNKCDMDDKRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRKT
120 130 140 150 160 170
180 190 200
pF1KB5 ------TEDIMSLSTQGDYINLQTKSSSWSCC
.:.. ..:. : . ..: ::
CCDS17 PVKEPNSENV-DISSGGGVTGWKSK-----CC
180 190 200
>>CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 (205 aa)
initn: 385 init1: 186 opt: 422 Z-score: 488.2 bits: 97.3 E(32554): 7.2e-21
Smith-Waterman score: 422; 32.5% identity (68.5% similar) in 203 aa overlap (5-203:9-205)
10 20 30 40 50
pF1KB5 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEI
:.:::.:..::..:::. :. :...:.... : ::.:::: ..... : .
CCDS46 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKT
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 VRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGE
..::.:: :::::: ..: ::: : . ....:::. .:.: ..: :..: . :
CCDS46 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----E
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 PVPCLLLANKCDLSPW-AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMR
: ::..:::::. .:. .:. :. . :::.:. :..... .. .. .
CCDS46 NVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIP-FLETSAKNATNVEQSFMTMAAEIKK
120 130 140 150 160 170
180 190 200
pF1KB5 NSTEDIMSLSTQGDYINLQT---KSSSWSCC
. ... . ...:. :.:. .::
CCDS46 RMGPGATAGGAEKSNVKIQSTPVKQSGGGCC
180 190 200
203 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 06:16:27 2016 done: Sat Nov 5 06:16:28 2016
Total Scan time: 1.880 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]