FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6215, 265 aa 1>>>pF1KE6215 265 - 265 aa - 265 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4336+/-0.000779; mu= 14.1091+/- 0.047 mean_var=65.7715+/-13.143, 0's: 0 Z-trim(107.6): 6 B-trim: 3 in 1/49 Lambda= 0.158145 statistics sampled from 9674 (9680) to 9674 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.297), width: 16 Scan time: 1.570 The best scores are: opt bits E(32554) CCDS7648.1 UROS gene_id:7390|Hs108|chr10 ( 265) 1743 406.2 1.2e-113 CCDS81522.1 UROS gene_id:7390|Hs108|chr10 ( 139) 862 205.1 2.2e-53 >>CCDS7648.1 UROS gene_id:7390|Hs108|chr10 (265 aa) initn: 1743 init1: 1743 opt: 1743 Z-score: 2153.9 bits: 406.2 E(32554): 1.2e-113 Smith-Waterman score: 1743; 100.0% identity (100.0% similar) in 265 aa overlap (1-265:1-265) 10 20 30 40 50 60 pF1KE6 MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 FTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 FTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 NAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 NAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 NSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGLPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 NSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGLPVS 190 200 210 220 230 240 250 260 pF1KE6 CTAESPTPQALATGIRKALQPHGCC ::::::::::::::::::::::::: CCDS76 CTAESPTPQALATGIRKALQPHGCC 250 260 >>CCDS81522.1 UROS gene_id:7390|Hs108|chr10 (139 aa) initn: 876 init1: 862 opt: 862 Z-score: 1071.9 bits: 205.1 E(32554): 2.2e-53 Smith-Waterman score: 862; 99.2% identity (99.2% similar) in 133 aa overlap (1-133:1-133) 10 20 30 40 50 60 pF1KE6 MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 FTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 FTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 NAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNL ::::::::::: : CCDS81 NAEKLAEYICSSEEVKGIF 130 265 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:09:29 2016 done: Tue Nov 8 11:09:29 2016 Total Scan time: 1.570 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]