FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6123, 151 aa 1>>>pF1KE6123 151 - 151 aa - 151 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2415+/-0.000622; mu= 12.8285+/- 0.038 mean_var=66.5427+/-13.166, 0's: 0 Z-trim(111.8): 3 B-trim: 0 in 0/51 Lambda= 0.157226 statistics sampled from 12655 (12656) to 12655 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.766), E-opt: 0.2 (0.389), width: 16 Scan time: 1.370 The best scores are: opt bits E(32554) CCDS32121.1 NPC2 gene_id:10577|Hs108|chr14 ( 151) 1025 240.3 3.4e-64 >>CCDS32121.1 NPC2 gene_id:10577|Hs108|chr14 (151 aa) initn: 1025 init1: 1025 opt: 1025 Z-score: 1265.9 bits: 240.3 E(32554): 3.4e-64 Smith-Waterman score: 1025; 100.0% identity (100.0% similar) in 151 aa overlap (1-151:1-151) 10 20 30 40 50 60 pF1KE6 MRFLAATFLLLALSTAAQAEPVQFKDCGSVDGVIKEVNVSPCPTQPCQLSKGQSYSVNVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MRFLAATFLLLALSTAAQAEPVQFKDCGSVDGVIKEVNVSPCPTQPCQLSKGQSYSVNVT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 FTSNIQSKSSKAVVHGILMGVPVPFPIPEPDGCKSGINCPIQKDKTYSYLNKLPVKSEYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 FTSNIQSKSSKAVVHGILMGVPVPFPIPEPDGCKSGINCPIQKDKTYSYLNKLPVKSEYP 70 80 90 100 110 120 130 140 150 pF1KE6 SIKLVVEWQLQDDKNQSLFCWEIPVQIVSHL ::::::::::::::::::::::::::::::: CCDS32 SIKLVVEWQLQDDKNQSLFCWEIPVQIVSHL 130 140 150 151 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:39:05 2016 done: Tue Nov 8 09:39:05 2016 Total Scan time: 1.370 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]