FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6305, 410 aa 1>>>pF1KE6305 410 - 410 aa - 410 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8410+/-0.000836; mu= 19.7031+/- 0.050 mean_var=63.7556+/-13.072, 0's: 0 Z-trim(106.6): 10 B-trim: 0 in 0/49 Lambda= 0.160626 statistics sampled from 9092 (9095) to 9092 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.279), width: 16 Scan time: 3.030 The best scores are: opt bits E(32554) CCDS7482.1 COX15 gene_id:1355|Hs108|chr10 ( 410) 2753 646.7 1.2e-185 CCDS7481.1 COX15 gene_id:1355|Hs108|chr10 ( 388) 2479 583.2 1.5e-166 >>CCDS7482.1 COX15 gene_id:1355|Hs108|chr10 (410 aa) initn: 2753 init1: 2753 opt: 2753 Z-score: 3446.6 bits: 646.7 E(32554): 1.2e-185 Smith-Waterman score: 2753; 100.0% identity (100.0% similar) in 410 aa overlap (1-410:1-410) 10 20 30 40 50 60 pF1KE6 MQRLLFPPLRALKGRQYLPLLAPRAAPRAQCDCIRRPLRPGQYSTISEVALQSGRGTVSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 MQRLLFPPLRALKGRQYLPLLAPRAAPRAQCDCIRRPLRPGQYSTISEVALQSGRGTVSL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PSKAAERVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 PSKAAERVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 FQRYQQFPEFKILNHDMTLTEFKFIWYMEYSHRMWGRLVGLVYILPAAYFWRKGWLSRGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 FQRYQQFPEFKILNHDMTLTEFKFIWYMEYSHRMWGRLVGLVYILPAAYFWRKGWLSRGM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 KGRVLALCGLVCFQGLLGWYMVKSGLEEKSDSHDIPRVSQYRLAAHLGSALVLYCASLWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 KGRVLALCGLVCFQGLLGWYMVKSGLEEKSDSHDIPRVSQYRLAAHLGSALVLYCASLWT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 SLSLLLPPHKLPETHQLLQLRRFAHGTAGLVFLTALSGAFVAGLDAGLVYNSFPKMGESW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 SLSLLLPPHKLPETHQLLQLRRFAHGTAGLVFLTALSGAFVAGLDAGLVYNSFPKMGESW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 IPEDLFTFSPILRNVFENPTMVQFDHRILGITSVTAITVLYFLSRRIPLPRRTKMAAVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 IPEDLFTFSPILRNVFENPTMVQFDHRILGITSVTAITVLYFLSRRIPLPRRTKMAAVTL 310 320 330 340 350 360 370 380 390 400 410 pF1KE6 LALAYTQVGLGISTLLMYVPTPLAATHQSGSLALLTGALWLMNELRRVPK :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 LALAYTQVGLGISTLLMYVPTPLAATHQSGSLALLTGALWLMNELRRVPK 370 380 390 400 410 >>CCDS7481.1 COX15 gene_id:1355|Hs108|chr10 (388 aa) initn: 2479 init1: 2479 opt: 2479 Z-score: 3103.8 bits: 583.2 E(32554): 1.5e-166 Smith-Waterman score: 2479; 100.0% identity (100.0% similar) in 367 aa overlap (1-367:1-367) 10 20 30 40 50 60 pF1KE6 MQRLLFPPLRALKGRQYLPLLAPRAAPRAQCDCIRRPLRPGQYSTISEVALQSGRGTVSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 MQRLLFPPLRALKGRQYLPLLAPRAAPRAQCDCIRRPLRPGQYSTISEVALQSGRGTVSL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PSKAAERVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 PSKAAERVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 FQRYQQFPEFKILNHDMTLTEFKFIWYMEYSHRMWGRLVGLVYILPAAYFWRKGWLSRGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 FQRYQQFPEFKILNHDMTLTEFKFIWYMEYSHRMWGRLVGLVYILPAAYFWRKGWLSRGM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 KGRVLALCGLVCFQGLLGWYMVKSGLEEKSDSHDIPRVSQYRLAAHLGSALVLYCASLWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 KGRVLALCGLVCFQGLLGWYMVKSGLEEKSDSHDIPRVSQYRLAAHLGSALVLYCASLWT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 SLSLLLPPHKLPETHQLLQLRRFAHGTAGLVFLTALSGAFVAGLDAGLVYNSFPKMGESW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 SLSLLLPPHKLPETHQLLQLRRFAHGTAGLVFLTALSGAFVAGLDAGLVYNSFPKMGESW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 IPEDLFTFSPILRNVFENPTMVQFDHRILGITSVTAITVLYFLSRRIPLPRRTKMAAVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 IPEDLFTFSPILRNVFENPTMVQFDHRILGITSVTAITVLYFLSRRIPLPRRTKMAAVTL 310 320 330 340 350 360 370 380 390 400 410 pF1KE6 LALAYTQVGLGISTLLMYVPTPLAATHQSGSLALLTGALWLMNELRRVPK ::::::: CCDS74 LALAYTQGPVLFNFTFKISDLDEGIRNI 370 380 410 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:55:51 2016 done: Tue Nov 8 11:55:52 2016 Total Scan time: 3.030 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]